Protein

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Genbank accession
YP_009203993.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MATIKQIQFKRTTKAGVKPTAVQLAEGELAINLTDRMLFTKDQNGAIIDLGFAKGGNIDGNVTQTGNYIQTGRYDLNGDMTAINVAFSGDTSTKAIIIRPNGSAAGKPLVITNYGGSVTRFEQILAGTANITDLILRGFYGDTEANFKDIATFSINPVTGAVKSVLDGDVFLSYPVAKKLVISTVWNGTTVLGDNSIAIGDSDTGIKWLADGKYAMVSNGAATLRFQDGYTESVRSLVFRYSNADYGNNNLIAPDGASLARFDTHLDGNSAGDGNTYIALNQGGKYNHYLRGSGAAYVDTKNGLVLSTSTVLYAAAGVDTYNKPLTSYDVSSMTNQPAGETLSLNRLRRFRAREGGTIMHEAMIQEATNDNYSYGLTYWTGGGIDTWISTLKNDGTLILKNGVKANGAGGVFQINSSVASSGYLQGNIADNTSAWLVGKSRGDDSLVSFASHLNKADANSYNSLNLRKDGSVTVTSQGRTNKLLLNKDHVLIDATQWPLTYGHAYAEQWAYDAPVTVDMGNVSGVSDYYPCIAQKTIATTHGYNTKIELGTLRNGGAQWGRGIIRVGTFGYEPDRNRQGVFTFTIEGDFISQRYVTAPHFLTGVGSSAYPNKPGITIGDTDTGIYWASDGVVTHWANAQQIAVLDTGGFRTEAGKSLVSYGDLNQASDSHSTYVRDLYVRSDIRVKSELRKFESPSETLKKMNGYLYLQKKGFKEDGSINWEQSSGLIAQEVQAVLPELISVDKDNPEGLLRLNYNGIIALNTATINEHTDEISELKARIQKLEEIISALI
Physico‐chemical
properties
protein length:791 AA
molecular weight: 85380,21820 Da
isoelectric point:5,85904
aromaticity:0,08976
hydropathy:-0,27383

Domains

Domains [InterPro]
DC_0012
STR
1–791
DC_0012
IPR030392
CHP
681–739
IPR030392 Coil
IPR030392
CHP
681–780
IPR030392
YP_009203993.1
1 791
Architecture
STR
STR 1-791
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009203993.1
1 791
Domain Start End Length (AA) Confidence
N-terminal 1 67 67 0,6550
Central domain 68 266 200 0,3935
C-terminal 267 791 524 0,8618
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-67
Central
68-266
C-terminal
267-791

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage Merlin
[NCBI] 		1675602 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Moonvirus
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009203993.1 [NCBI]
Genbank nucleotide accession
NC_028857 [NCBI]
CDS location
range 159254 -> 161629
strand +
CDS
ATGGCAACTATCAAACAAATTCAGTTCAAAAGAACTACAAAGGCTGGAGTGAAACCTACAGCCGTCCAGCTTGCCGAAGGTGAACTGGCTATTAACTTAACCGATCGTATGCTGTTCACTAAAGATCAGAATGGTGCTATTATCGATTTAGGATTTGCTAAAGGCGGTAATATCGATGGTAACGTAACTCAAACTGGCAATTACATTCAAACCGGGCGCTATGATTTAAATGGCGACATGACCGCAATAAATGTTGCGTTCTCTGGCGATACTTCCACTAAAGCAATTATCATACGTCCTAACGGCAGCGCCGCAGGAAAGCCTTTGGTTATCACTAACTACGGAGGCTCAGTTACGCGTTTTGAGCAAATTCTAGCTGGAACCGCCAATATCACTGATTTGATTCTTCGCGGTTTTTATGGCGATACAGAAGCTAATTTCAAAGATATAGCAACATTTAGTATTAACCCGGTCACAGGAGCTGTAAAGTCTGTATTAGATGGAGATGTGTTCCTAAGTTATCCCGTAGCTAAAAAACTAGTTATTAGCACTGTCTGGAATGGAACTACTGTGTTAGGTGATAACTCCATTGCAATAGGTGATTCTGACACTGGCATTAAATGGTTAGCTGATGGCAAATATGCTATGGTATCAAATGGTGCCGCGACATTAAGATTTCAAGATGGATATACAGAATCAGTTCGTTCTTTGGTGTTTCGCTATAGTAATGCTGATTATGGTAATAATAATCTTATTGCGCCGGATGGCGCTTCATTGGCAAGATTTGATACTCACTTAGATGGTAATTCTGCTGGAGATGGTAATACTTATATTGCACTTAACCAAGGTGGAAAATATAATCACTATTTAAGAGGTAGCGGTGCAGCTTATGTAGATACTAAAAACGGTTTAGTATTAAGTACAAGTACAGTATTATATGCTGCTGCAGGTGTGGACACTTATAATAAGCCTTTAACATCTTATGATGTTTCAAGCATGACTAATCAGCCAGCTGGTGAAACATTATCGTTAAACCGCTTGCGTCGCTTCCGTGCTCGTGAAGGCGGAACTATCATGCATGAAGCAATGATTCAGGAAGCCACAAATGATAATTATTCTTATGGTTTGACTTATTGGACCGGTGGAGGTATTGATACCTGGATTTCAACTCTTAAGAATGATGGAACATTAATTCTTAAGAATGGTGTAAAAGCAAATGGTGCTGGTGGCGTTTTTCAAATAAACAGCTCAGTTGCTAGTTCTGGATATTTGCAAGGTAATATAGCAGATAATACATCAGCATGGTTGGTTGGTAAATCTAGAGGTGACGATAGTCTTGTCTCGTTTGCATCTCATTTAAATAAAGCTGACGCAAATAGTTATAATAGTCTAAATTTGCGCAAAGACGGTTCTGTTACTGTAACATCTCAAGGAAGAACTAATAAGCTTCTGCTGAATAAAGATCATGTATTAATTGATGCAACACAATGGCCATTGACATATGGTCATGCCTATGCCGAGCAATGGGCTTATGACGCTCCTGTTACAGTTGATATGGGTAATGTCTCTGGGGTTTCTGATTATTATCCGTGTATTGCTCAGAAAACTATAGCAACGACCCATGGGTATAACACAAAAATTGAACTCGGCACTCTTCGTAACGGTGGAGCTCAATGGGGCCGAGGAATTATCCGTGTCGGTACATTTGGATACGAACCTGACAGAAACCGTCAAGGTGTTTTTACCTTTACAATTGAAGGTGATTTTATATCTCAACGGTATGTTACTGCTCCTCATTTCTTAACCGGAGTAGGATCATCAGCATATCCAAATAAACCTGGTATAACTATCGGTGATACAGATACCGGAATATATTGGGCCAGTGATGGTGTTGTTACCCACTGGGCAAATGCTCAGCAAATTGCCGTATTAGATACAGGTGGATTTAGAACCGAAGCTGGTAAATCATTAGTTTCTTATGGCGATTTGAACCAAGCTAGCGATTCACACTCCACTTATGTTCGCGATCTTTATGTTCGTTCGGATATTCGTGTTAAGAGTGAACTTCGTAAATTTGAATCTCCTTCTGAAACTCTTAAGAAGATGAATGGATATCTATATCTTCAGAAGAAAGGGTTCAAAGAAGACGGCTCTATTAATTGGGAACAGTCATCCGGTTTAATTGCTCAAGAAGTTCAAGCTGTATTGCCTGAGTTGATTTCAGTCGATAAAGATAATCCAGAAGGATTACTTCGTCTAAACTACAATGGTATTATTGCGCTAAACACTGCAACAATTAACGAACACACTGATGAGATTTCTGAATTAAAAGCTCGCATTCAGAAGCTTGAAGAAATCATTTCTGCATTAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dc0b4396686ace4e174c1b4e742fc6d79505077054aa67c6967024a7435d6521
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5665
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50