Protein

View in Explore
Genbank accession
QBX29931.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,58
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MLLDNERQGALNYYDDLWTRQLTTGSSAFEFSVYKKSLLGDNPLNHKYHALNDQAFVSFVHKDKVQLFNIMRVEETETTIHCYCENLNLELLNEYCNAYKATKAMSFEEYLVQFDILNWGALTIGTNEVKDKKLTLEWTGQDTKLARILSIANNFDAEIEFETQLHNNHTFKAFIVNVYKEYEEGVSYGVGRDRSDIVLRYQKNVTGITKKLDKRQIYNAIRPYGKKTVKGERVISNPVTRKVTKTVGSNRTYLGGDLKYYGHTIKKANVQSIINYAVQYNILPSGIICQLYLESLWGDSAVGKRDNNWAGISGGAQTRPSGVKVTTGMARPPSEGGTYMHYASVDDFLKDYTYLLAKQGLYNVVGKKNIADYTKGLFRVGGAKDDYAAAGYQSYTNLMTNIRNGINKVTGNILDTIDKLWQTPVQPITAVNVARRATKTMQALNEATRLKGRRIGSGQCYALSGWYAKKLDGAWIDSSIGGIRGRIGGGMAAALIGTDYNWGAYGWKVDKSPNARNLKAGGIYNVRANRGAPFYTTGWGHTGIIKSVSKTRVTVLEQNFVGRMYVVENSYDINSFASGLQTVCYPREIAQGMSVNGATTQQVTGGTQISYEEVVQEARTETYEEEQIIYIDNSIYKEWKDENGKVEYYLKNGFLYAPLSRDRYPSVLTGNETRDNWIRKDMEVETDSQEVLMSTGLKDLKAHAYPAITYEVDGYVDLELGDVVRIQDDGYEPPLILTARVVEQEISITNPSSNKTKFSNFVEKESQLASDLISDMLRLYDESIPYEIKLATSNGVAFKNGTGESVLTPSLQKNGKDYEAVYFYKNGDSLIDIGPSLIVKASDFNHVLNITVEAYLNEELVASTQISFTDTEDGADGKDGLPGPQGPPGIDGLQGPRGEQGIPGPAGADGKATYTHIAYALDETGTTGFSVSDNTGKTYIGMYVDDNIIDSNDPKKYKWNLIKGADGARGIQGPAGADGKTPYWHVAYANSSDGTVDFSVSDSANKRYIGQYTDYDAIDSSDPKKYRWTDMVGTVVVGTNNLIDGTKSFFGTDWFTSATLEDENLSNCPFTLKKWISGQKVSHAKDIMVEQGVTYTFSAYVKREVAGNLYFYLYDIADGFITSDTPRETIIKNVDSSLRRFEITFTPTKTGRIRPRFAMVSSEQGSFSSGGFMLVRGNKTGDWQESEADKASNLDSKADGAFTVEQLNAIAEEQRLMKANLEAAASLQEVQDKAKELLDQIKKIEDGQKVSEQTMISNANRVVQILAKLENVQLVTEAITQYMSYSNDGLVIKMKDGTSSVRVTTDRIAFYSGGTETAFISQGYLQIESGVFTLRLRIGSFLFEESSKGRLQIKKIRGIGG
Physico‐chemical
properties
protein length:1361 AA
molecular weight: 151099,65440 Da
isoelectric point:5,71257
aromaticity:0,10140
hydropathy:-0,44078

Domains

Domains [InterPro]
DC_0558
ATT
1–377
DC_0558 G3DSA:3.90.1720.60 G3DSA:2.60.120.260 Coil
IPR002901
ENZ
257–393
IPR002901 IPR007921
IPR002901
ENZ
272–387
IPR002901 IPR007921
DC_1027
STR
301–1360
DC_1027
QBX29931.1
1 1361
Architecture
ATT
STR
ATT 1-377 | STR 378-1360 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX29931.1
1 1361
Domain Start End Length (AA) Confidence
N-terminal 1 253 253 0,9809
Central domain 254 452 200 0,6547
C-terminal 453 1361 908 0,0582
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-253
Central
254-452
C-terminal
453-1361

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan52
[NCBI] 		2548232 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus agalactiae
[NCBI] 		1311 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX29931.1 [NCBI]
Genbank nucleotide accession
MK448971.1 [NCBI]
CDS location
range 32761 -> 36846
strand +
CDS
TTGCTTTTAGACAATGAGCGACAAGGAGCACTTAATTATTATGATGATTTGTGGACTAGACAGCTCACAACTGGTTCGTCAGCATTTGAGTTTTCTGTTTATAAAAAATCGCTGTTGGGTGATAATCCACTTAATCACAAATATCACGCACTAAACGATCAAGCATTTGTTTCTTTTGTACACAAAGATAAAGTACAATTGTTTAACATCATGCGAGTCGAGGAAACAGAGACAACAATACATTGCTATTGCGAAAATCTTAATTTAGAGTTACTAAACGAGTATTGCAACGCATATAAAGCAACTAAAGCAATGTCATTTGAAGAGTATCTTGTGCAGTTTGATATTTTAAATTGGGGTGCTTTGACAATTGGCACAAACGAAGTTAAGGACAAAAAACTGACATTGGAATGGACTGGTCAAGACACTAAGTTAGCTCGTATTTTGTCAATTGCTAATAATTTTGATGCAGAAATCGAATTTGAAACTCAATTACACAACAATCACACGTTTAAAGCGTTTATTGTAAATGTGTACAAGGAATACGAAGAGGGCGTGTCCTATGGCGTAGGTCGTGACCGCAGCGACATAGTGTTGAGATATCAAAAAAATGTAACTGGTATCACTAAAAAATTAGACAAGCGCCAGATTTACAACGCCATACGCCCGTATGGCAAAAAGACAGTCAAAGGCGAGCGCGTTATTTCTAATCCTGTAACTCGCAAAGTCACTAAAACAGTTGGGTCAAATCGTACATATTTAGGCGGAGACCTCAAATATTATGGTCATACAATCAAAAAAGCTAACGTACAATCTATTATTAACTACGCGGTGCAGTATAATATTTTGCCGAGTGGAATCATATGTCAACTGTACTTAGAAAGTCTTTGGGGTGATTCAGCAGTTGGTAAACGTGACAATAACTGGGCAGGTATAAGCGGCGGAGCACAGACACGCCCTAGTGGAGTAAAAGTCACTACTGGAATGGCTCGTCCTCCCAGCGAGGGTGGAACATACATGCACTACGCAAGTGTTGATGACTTTTTAAAAGATTATACTTATCTTTTAGCTAAACAAGGACTATATAACGTTGTTGGCAAAAAGAATATAGCAGACTATACAAAAGGTTTGTTTCGTGTCGGTGGCGCTAAAGATGATTACGCGGCAGCAGGATATCAAAGCTACACAAATTTGATGACTAATATCCGAAATGGTATCAATAAAGTAACTGGAAATATCCTAGATACTATTGATAAGCTGTGGCAAACGCCAGTACAGCCTATAACAGCCGTAAACGTAGCTAGAAGAGCTACTAAGACAATGCAAGCACTAAATGAAGCTACTAGACTTAAAGGTCGCAGAATCGGCTCAGGGCAGTGTTATGCTTTGTCTGGTTGGTACGCTAAGAAGTTAGACGGAGCTTGGATTGATAGTTCCATCGGTGGTATCCGTGGTCGCATTGGCGGTGGGATGGCTGCTGCTTTAATCGGTACTGACTATAACTGGGGGGCGTATGGTTGGAAGGTAGATAAATCACCTAACGCTAGAAACTTAAAAGCTGGTGGTATTTATAATGTACGAGCAAATCGAGGCGCTCCTTTTTATACCACAGGCTGGGGGCATACAGGTATTATCAAGAGTGTGTCCAAGACCAGAGTTACTGTTTTGGAGCAAAACTTTGTTGGCCGCATGTATGTTGTCGAAAACTCATATGACATTAACTCTTTCGCATCTGGATTGCAGACAGTATGTTATCCACGTGAAATAGCGCAAGGAATGTCTGTTAACGGGGCAACAACACAGCAAGTTACTGGTGGAACACAGATATCGTACGAAGAAGTTGTACAAGAGGCGCGAACAGAAACCTATGAAGAAGAACAAATCATCTATATTGACAACTCTATCTACAAAGAGTGGAAAGATGAAAACGGTAAAGTAGAGTACTATCTCAAAAATGGATTTTTGTACGCACCACTTTCAAGAGACCGCTATCCATCTGTTTTAACCGGTAATGAGACACGAGACAACTGGATACGAAAAGACATGGAAGTCGAGACTGATAGTCAAGAAGTCTTGATGTCAACAGGTCTAAAAGACTTAAAAGCACACGCATATCCAGCAATTACATACGAAGTTGATGGCTATGTTGACTTAGAACTTGGTGATGTTGTGCGGATACAGGACGACGGATACGAGCCACCGCTGATTTTGACAGCACGAGTAGTTGAGCAAGAAATATCCATAACAAATCCCAGCTCTAACAAAACTAAATTCAGCAATTTTGTCGAAAAAGAAAGTCAGTTAGCTTCTGATTTAATCAGTGATATGTTGCGTCTATACGATGAGTCAATTCCATACGAAATCAAACTAGCTACTTCGAATGGTGTCGCTTTTAAAAATGGCACTGGTGAATCTGTCCTAACTCCTAGCTTGCAAAAGAACGGGAAAGACTATGAAGCAGTTTATTTTTATAAAAATGGTGACTCGCTAATTGATATCGGACCATCGCTAATTGTTAAAGCAAGCGACTTTAACCACGTTTTAAATATAACAGTTGAGGCATATTTAAATGAGGAACTTGTAGCAAGTACGCAAATATCCTTTACAGACACAGAAGACGGTGCAGACGGAAAAGACGGGTTGCCAGGACCGCAAGGTCCACCGGGGATAGATGGTTTACAAGGTCCGAGAGGAGAACAGGGTATTCCTGGTCCGGCTGGTGCTGACGGAAAGGCAACGTACACACACATTGCTTACGCCCTTGACGAAACCGGAACTACTGGTTTTAGCGTATCTGATAATACTGGCAAAACATACATAGGTATGTATGTTGATGATAATATCATAGACTCAAACGACCCTAAAAAGTACAAGTGGAATTTGATAAAAGGCGCAGATGGTGCTAGAGGTATCCAAGGTCCAGCTGGTGCTGACGGTAAGACACCTTACTGGCATGTAGCGTATGCAAACAGCTCAGATGGGACAGTTGACTTTAGCGTGTCTGATAGTGCAAACAAGCGCTACATTGGGCAATATACTGACTACGATGCAATAGATTCAAGTGACCCTAAAAAATACCGCTGGACTGACATGGTTGGGACGGTTGTCGTCGGGACAAACAATCTGATTGATGGTACAAAATCATTTTTTGGGACTGATTGGTTTACTTCTGCAACGCTAGAAGACGAGAACCTCTCTAATTGTCCTTTCACGCTTAAAAAATGGATTAGTGGGCAAAAAGTGTCGCATGCAAAAGATATCATGGTCGAGCAAGGTGTAACGTACACTTTTAGTGCTTATGTTAAACGTGAGGTAGCTGGGAATTTATATTTTTATCTTTATGATATAGCAGATGGTTTTATTACTAGCGATACCCCACGAGAGACAATTATAAAAAACGTTGACTCTAGTCTCAGACGTTTTGAAATCACTTTTACACCAACTAAGACAGGTAGGATTAGACCAAGGTTCGCGATGGTGTCATCGGAGCAAGGTAGTTTCAGCTCTGGTGGGTTTATGCTCGTTAGGGGAAATAAAACAGGCGATTGGCAGGAATCGGAAGCTGATAAAGCAAGTAATCTTGATTCAAAAGCCGATGGTGCTTTTACTGTTGAGCAGTTAAACGCTATTGCGGAAGAACAGCGTTTGATGAAAGCTAATCTTGAAGCTGCTGCAAGTTTGCAAGAAGTACAAGATAAAGCAAAAGAGTTACTTGATCAAATTAAAAAAATAGAAGATGGTCAAAAAGTATCAGAGCAAACTATGATTTCAAACGCTAATAGAGTTGTTCAGATACTGGCTAAGCTCGAAAATGTACAACTTGTTACAGAAGCCATTACGCAGTATATGTCATACTCAAATGATGGTTTAGTTATCAAAATGAAAGATGGTACATCGTCGGTGAGAGTAACAACTGATCGCATAGCTTTTTATTCAGGTGGCACTGAGACTGCGTTTATTAGTCAAGGTTATCTACAAATCGAGTCTGGTGTTTTCACTTTGCGGCTTCGTATTGGAAGCTTTTTGTTTGAAGAAAGTTCGAAGGGGCGTTTACAAATCAAGAAAATTAGAGGGATTGGAGGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
86a30814b981ef9f0215d2260d0238e072712c69edf7c62cdc4fe4ac7d1facfa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7415
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank