Protein

View in Explore
Genbank accession
YP_002455801.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MKVKATLHTVASDSTDTLGLGVLTGATSMQVVRNANQIPHLTMSYKADAPLADELVSGRVIVCAMGKSSEEQNQKFRIINVSKDVGSMSISVTANHIAGDLSMMPIYKNISIANATPKDTFKAVMGSLAYGSNLADYQFSTDIQKVANVAWQFNEVENANSIFLGDDQAGDTVVQTIQAIYNGQWKFNNYHWSLLKHAGEDSGIIIKYGRNMLSAVEDHTTDSTYNAIMPYASYTPNTTLVDGSAMEGKGTVQYLGTGGAEVYDSPNKGNKVVGHVQNGAYYQVTAKAEDNTCNGNTWYKIGDGQWIDEHFFTFDKSGNYVINSTTGQGTIKITSDTDNNRGIVSDYRGVGTVVYAGLGRVRLWSSPLTGHRPMEQYVENGIQYKIWKIGYDEYGRKWYCIGNDNQWIPEEYFSVTKSSDYVTTPVTGILHVKTANAVSAYGPSGEALRSDKLAAGSFHKITSVSKANNGSSWYEIAPNFWVKGDDNIDFTQSGSVAVDEDTARKAIIQSSGKIAIYNSPDGTDASGKYLTTGDQVKITGQSDSNGHTFYRLDSGGWVDAAYFDFSSASDVGIGGANDADAQVETQTLMLDPPVLISQYATGQEALRVQAVDLSSYNVGNDKDKLKTVAEQYMREYRIGRPNYSLTVEYPNIEDEFSQLRQVDLYDYVGIQVDDLNILDKAMVNSITYDVLLGQNISVTIGQLPLTYEHLLGQMQHETTKQLATVEKKSNHLFGQMNQALKLQSDAQKASILKIGEDLKIESQVLNDNYDQLKDRIEAINNQVTDVQSWITSGGSGVITAYPNWQNPTELRASSASGGYMTFNGNGLGYTGADGTLRTAIDSQGRLVAESISGGTITGVILKGTQITADSIINIHQRYYTVLSGEYGFSVSDDEGNASAMTVDSIKVGGTTINGSQLYRVMEKCGVL
Physico‐chemical
properties
protein length:927 AA
molecular weight: 100920,89300 Da
isoelectric point:4,94797
aromaticity:0,08954
hydropathy:-0,35361

Domains

Domains [InterPro]
IPR007119
35–232
IPR007119 Coil
YP_002455801.1
1 927
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Lv-1
[NCBI] 		578234 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus jensenii
[NCBI] 		109790 Bacteria > Firmicutes > Bacilli > Lactobacillales > Lactobacillaceae > Lactobacillus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002455801.1 [NCBI]
Genbank nucleotide accession
NC_011801 [NCBI]
CDS location
range 14069 -> 16852
strand +
CDS
ATGAAAGTTAAAGCAACTTTACATACAGTCGCAAGTGATAGCACTGATACTTTGGGACTTGGGGTTCTTACGGGTGCAACATCAATGCAAGTTGTGCGAAATGCTAACCAAATTCCACACCTTACAATGAGTTACAAGGCTGATGCTCCTCTTGCAGACGAGTTAGTCAGTGGTCGTGTGATTGTTTGTGCTATGGGTAAGAGTTCTGAAGAACAGAACCAGAAGTTTCGTATCATAAACGTTTCAAAAGACGTTGGTTCAATGAGTATCTCAGTTACTGCTAATCACATTGCTGGTGACCTCTCAATGATGCCAATTTATAAGAATATTTCAATTGCCAATGCTACGCCTAAAGATACTTTTAAAGCAGTTATGGGTTCACTTGCGTATGGTTCAAATCTTGCAGATTATCAGTTTTCTACTGATATACAGAAAGTTGCTAATGTTGCTTGGCAGTTCAATGAAGTGGAGAATGCTAATAGCATTTTTCTTGGGGATGACCAGGCAGGTGATACAGTTGTTCAAACCATACAAGCAATCTACAACGGTCAGTGGAAATTTAATAATTACCACTGGTCGTTATTAAAGCATGCAGGGGAAGACTCAGGAATAATTATCAAGTATGGTCGGAATATGCTTTCAGCGGTTGAAGATCATACGACCGACTCCACTTACAATGCAATTATGCCGTACGCTAGCTACACACCAAATACGACTTTGGTTGATGGTAGTGCTATGGAAGGAAAAGGTACAGTTCAATATCTTGGAACTGGTGGTGCAGAAGTATACGATAGCCCGAATAAAGGTAATAAGGTAGTTGGTCACGTTCAGAATGGTGCTTATTATCAAGTTACTGCTAAAGCTGAAGACAATACATGTAATGGCAATACTTGGTATAAGATTGGTGATGGTCAATGGATTGATGAACACTTTTTCACGTTCGATAAAAGTGGCAACTATGTTATTAACTCTACAACAGGCCAAGGAACAATAAAGATTACTTCTGATACAGATAATAATCGAGGCATTGTTTCAGATTATCGGGGTGTTGGTACTGTTGTTTATGCTGGGCTTGGTAGAGTTCGGCTATGGTCTTCACCACTAACTGGACACAGACCAATGGAGCAGTACGTTGAAAACGGTATTCAATATAAGATTTGGAAAATTGGTTATGATGAGTATGGTCGTAAATGGTACTGCATTGGTAATGACAATCAATGGATACCTGAGGAGTACTTTTCTGTAACTAAATCTAGTGATTACGTTACAACTCCAGTAACTGGAATTCTCCACGTCAAGACTGCAAATGCTGTTTCAGCCTATGGACCATCTGGAGAAGCATTAAGAAGCGATAAATTAGCAGCAGGAAGTTTCCATAAAATAACCAGTGTATCTAAAGCAAATAATGGTTCGAGTTGGTATGAAATAGCCCCTAATTTTTGGGTTAAGGGTGATGACAATATTGACTTCACTCAAAGTGGTTCAGTTGCAGTTGATGAAGATACGGCAAGAAAAGCAATTATCCAATCATCAGGAAAAATAGCAATTTACAATTCTCCTGATGGTACTGATGCTTCTGGCAAATACTTAACTACAGGAGATCAAGTAAAGATAACGGGTCAATCTGATTCTAATGGTCATACTTTTTATAGACTTGATTCTGGTGGTTGGGTAGATGCAGCTTATTTTGATTTTAGTTCTGCAAGTGATGTTGGAATCGGTGGAGCTAATGACGCTGATGCCCAAGTTGAAACTCAAACCTTAATGTTAGATCCTCCAGTTTTAATTTCTCAATACGCAACTGGTCAAGAAGCTTTAAGAGTACAAGCAGTTGATCTATCTAGCTATAATGTTGGAAATGATAAAGATAAGCTTAAGACAGTAGCAGAGCAGTATATGCGAGAATATCGAATTGGTAGACCAAATTACTCATTGACGGTTGAATATCCAAACATTGAAGATGAATTTTCACAGCTTAGACAAGTAGATCTTTATGATTATGTTGGAATACAAGTAGATGACCTTAATATCTTAGACAAAGCAATGGTTAACTCCATAACTTACGATGTTTTGCTTGGTCAGAATATAAGTGTAACTATAGGACAGTTACCTCTAACTTATGAACATTTACTTGGACAAATGCAACATGAGACCACTAAACAACTTGCAACAGTTGAGAAAAAATCTAACCATTTGTTTGGACAAATGAATCAGGCATTGAAATTACAAAGTGATGCTCAAAAAGCATCGATTTTAAAAATTGGTGAGGATTTAAAGATTGAAAGTCAAGTTCTTAATGATAACTATGACCAACTTAAAGATCGAATTGAAGCTATTAACAATCAAGTAACTGATGTACAAAGTTGGATAACTAGTGGAGGTTCAGGTGTTATTACAGCCTATCCAAATTGGCAGAATCCGACTGAATTGCGTGCAAGTAGTGCTTCTGGTGGGTACATGACTTTTAACGGAAATGGGTTAGGCTATACTGGTGCTGATGGTACTCTAAGAACTGCTATAGATAGTCAAGGTCGACTTGTTGCGGAAAGTATAAGCGGTGGAACTATTACAGGGGTTATATTGAAAGGTACTCAAATAACTGCTGATAGTATCATAAATATCCATCAGCGTTACTATACTGTTTTATCGGGAGAATATGGCTTTTCTGTTTCTGATGATGAAGGCAATGCGTCGGCAATGACTGTAGATAGTATAAAAGTTGGTGGAACTACTATAAATGGTTCCCAACTTTATCGAGTTATGGAAAAATGCGGGGTGCTTTAA

Tertiary structure

PDB ID
4458e8964a1665dc2034315118a2fe590de227e3d49ba05766bd8ac4721c1abe
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2551
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage induction versus vaginal homeostasis: analysis of the lysogenic status of vaginal lactobacilli and characterization of a defective bacteriophage Martin,R., Soberon,N.E. and Suarez,J.E. 1902-07 — GenBank