Protein

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Genbank accession
ANT42498.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MINYSNLPNSALEITQQPEVKEITNELLKQLQNAINSNSLFTEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEWLSNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVTAILNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNQARENATTQITANKTESLEAITQAKENATTQITANKTESLEAITLAKTNANNEITEKQTQAINNINNAKENATTQINTNKQEVLNNIKEEKTQATSEITEAKKTAFNELLENLKPKFSGLFVGVYYIYNRIYVNGGWEQKVKDLSDYTLEKNKKYEIEVFFQFVSVSVENTGAYFGLKTNEGFLKESIQKITHKYVSQVYYKKLLVENVSGVLGLYHGYFYGNINYFNEAIITSVRELPNDTINSKVSNGSTFSNATTITQNLNDISDTTPTTRS
Physico‐chemical
properties
protein length:427 AA
molecular weight: 48354,48260 Da
isoelectric point:5,19278
aromaticity:0,08665
hydropathy:-0,51897

Domains

Domains [InterPro]
DC_0415
STR
3–198
DC_0415 Coil
Coil
Unmapped
115–142
Coil DC_0415
ANT42498.1
1 427
Architecture
STR
STR 3-425 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage UKEN31U
[NCBI] 		1852687 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Helicobacter pylori
[NCBI] 		210 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANT42498.1 [NCBI]
Genbank nucleotide accession
KX119174.1 [NCBI]
CDS location
range 13820 -> 15103
strand +
CDS
ATGATCAATTACTCTAATCTACCTAACAGCGCGCTAGAAATCACACAACAGCCAGAAGTGAAAGAAATCACTAACGAGCTTTTAAAGCAACTTCAAAACGCTATAAATTCTAATAGTCTTTTTACCGAGCAAGTGGAACTAAGCCTTAAAGGGATCGTTAGGATTTTAGAAGTGCTTTTAAGTTTGGATTTTTTCAAAAATGCGAATGAAATTGATAGCAGTTTAAGAAACTCCATTGAATGGCTGAGTAACGCCGGCGAGAGCTTAAAAACGAAAATGAAAGAATACGAGGGCTTTTTTAGCGATTTCAATACGAGCATGCGCACCAACGAGCAAGAAGTAACCGCTATTTTAAACGCTAACACCGAGAACATCAAAAGCGAGATTAAAAAGCTAGAAAATCAATTGATAGAAACCACTACAAGGCTTTTAACGAGTTATCAAATCTTTTTAAACCAGGCTAGAGAAAACGCTACAACGCAAATTACAGCCAACAAAACCGAAAGCCTTGAAGCGATCACGCAAGCTAAAGAAAACGCTACAACGCAAATTACAGCCAACAAAACCGAAAGCCTTGAAGCGATAACACTTGCTAAAACGAACGCTAACAATGAAATAACCGAAAAACAAACGCAAGCGATAAATAACATTAACAACGCCAAAGAAAACGCTACAACGCAAATTAACACGAATAAGCAAGAAGTTTTAAACAACATCAAAGAAGAAAAAACCCAAGCCACAAGCGAGATAACTGAAGCGAAAAAAACCGCATTTAACGAACTTTTAGAGAACCTAAAGCCGAAATTTAGCGGCTTGTTTGTGGGCGTGTATTATATTTATAATAGGATCTATGTTAACGGCGGATGGGAGCAAAAAGTCAAGGATTTGAGCGATTACACGCTAGAGAAAAATAAGAAATACGAAATAGAAGTATTTTTCCAGTTTGTGAGCGTGAGTGTAGAAAATACGGGCGCATATTTTGGATTAAAAACGAACGAAGGATTTTTAAAAGAAAGCATTCAAAAGATCACGCATAAGTATGTATCACAAGTTTATTATAAAAAGCTTTTAGTGGAAAATGTCAGCGGTGTTTTAGGTTTGTATCATGGCTATTTTTACGGGAATATCAATTATTTTAATGAAGCGATCATAACAAGCGTTAGAGAGCTACCAAACGATACGATTAACAGCAAGGTGAGTAATGGATCTACTTTTTCTAACGCTACAACGATCACGCAAAATTTGAACGACATAAGCGACACAACACCAACAACAAGGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5daa20d490261acdd9f3491f1b984dc25f7ab2eeb244b0311b013ba06abeb1da
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7183
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic structure and insertion sites of Helicobacter pylori prophages from various geographical origins Vale,F.F., Nunes,A., Oleastro,M., Gomes,J.P., Sampaio,D.A., Rocha,R., Vitor,J.M., Engstrand,L., Pascoe,B., Berthenet,E., Sheppard,S.K., Hitchings,M.D., Megraud,F., Vadivelu,J. and Lehours,P. 2017 28205536 GenBank