Protein

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Genbank accession
ALM62748.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MLGIFTSLLSSRSFSIVDQNTNQLVAADLRISRVNTRFSSVGQRHMLEDGTTKMDSRTVHPMEIIVEVFCPSIDVVDQINQLLLDRDTLYKVITRGMVFERMMCTSEALNQTPEMISATPARLTFSQVLVQNPKPIMFRNAGDSSIIDRGLALAEDVVGSASDLFDYAVNGVQNAADLF
Physico‐chemical
properties
protein length:179 AA
molecular weight: 19836,50210 Da
isoelectric point:4,82520
aromaticity:0,06145
hydropathy:0,07207

Domains

Domains [InterPro]
DC_0601
STR
1–178
DC_0601
IPR054442
ATT
4–165
IPR054442
ALM62748.1
1 179
Architecture
ATT
STR
ATT 1-165 | STR 166-178 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Nessie
[NCBI] 		1701864 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus PB1 >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALM62748.1 [NCBI]
Genbank nucleotide accession
KT372695.1 [NCBI]
CDS location
range 22571 -> 23110
strand +
CDS
ATGTTAGGGATTTTCACCAGCCTCCTAAGCTCGCGGTCTTTTTCGATTGTAGATCAGAATACAAACCAGCTAGTTGCTGCGGATTTGAGGATAAGCCGGGTTAACACCCGGTTTTCTTCTGTAGGGCAGCGCCACATGCTGGAAGACGGTACGACAAAGATGGACTCCAGAACGGTCCATCCTATGGAGATAATCGTTGAGGTATTCTGCCCTTCAATTGATGTCGTAGATCAGATTAATCAACTGCTCCTGGATCGTGATACGCTGTACAAAGTCATCACTCGCGGCATGGTATTCGAACGGATGATGTGTACCAGCGAAGCGCTTAATCAGACGCCAGAAATGATATCGGCAACTCCTGCGCGGCTGACATTTTCCCAAGTGCTCGTTCAGAATCCCAAACCAATCATGTTCAGGAATGCTGGAGACTCTTCCATAATCGACCGAGGGTTGGCCCTGGCCGAAGACGTTGTGGGCTCGGCCAGTGACCTGTTCGACTACGCAGTGAACGGCGTCCAGAACGCCGCAGACTTGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5b7ba9bccf5d245efad36425e119cb7a9b4f4b607102f8f51bab93b93ef9424
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8054
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Harvesting phage genomes from a metagenomic dataset Sible,E., Malki,K., Watkins,S.C. and Putonti,C. 2018-06-16 — GenBank