Protein

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Genbank accession
YP_005087526.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MGLTQVQTAGIATDAVANAHLANNAVTTAEVNADAITGAKIADDSIDSEHIVDGSIDTAHIANSSVTADKIAGNTINTARLVDASVTTAKIANAGVTADKIAGGAVTTARLADDAVTAAKLANTSVTAGSYGSATAIPAITVDAQGRVTAASTNTVNTTTNLATTTATGSVTVTSSTGNNATISEATGSAAGVMSTAHHDKLDGIASSANNYSHPNHSGDVTSSGDGATTIANDAITDGKIATNAVTTNKIAANAVTTGKLLNGNVTETKLANNAVTQAKIAAGAVGTTELAGTSVSSGKLATNAVTEAKIADDAVTQGKIADNAVNEARLQISNGGSNGQVLTKQSGNTGGLTWATISADGGNAATVDGIDSSSFLRSDAADTAGSDITFSGGAGAINIAANSDIRLASGDWTGNSLGKIQHHSNALYITGGSNGIIFRCGGSGNSDRWRVEQDGTLRPNSNNSYDIGSNSYRVKNIHTHDLNLSNEGSSNDVDGTWGNWTIQEGEENLFLINRRNNKKYKFNLTEVS
Physico‐chemical
properties
protein length:529 AA
molecular weight: 53168,99540 Da
isoelectric point:5,03215
aromaticity:0,03025
hydropathy:-0,22344

Domains

Domains [InterPro]
DC_1383
STR
2–83
DC_1383 DC_1194
DC_0140
STR
63–230
DC_0140
YP_005087526.1
1 529
Architecture
STR
STR 2-529
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_005087526.1
1 529
Domain Start End Length (AA) Confidence
N-terminal 1 121 121 0,9224
Central domain 122 320 200 0,1662
C-terminal 321 529 208 0,8606
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-121
Central
122-320
C-terminal
321-529

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage NATL2A-133
[NCBI] 		445692 Uroviricota > Caudoviricetes > Autographivirales > Tangaroavirus > Tangaroavirus NATL2A133
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_005087526.1 [NCBI]
Genbank nucleotide accession
NC_016659 [NCBI]
CDS location
range 4469 -> 6058
strand -
CDS
ATGGGATTAACACAGGTACAAACCGCTGGTATCGCCACAGATGCTGTAGCAAACGCTCATTTAGCAAATAACGCAGTCACCACTGCTGAAGTAAATGCAGATGCCATAACAGGAGCTAAAATAGCAGATGATTCAATAGATTCAGAACATATTGTTGATGGTTCTATTGATACTGCTCATATAGCAAATAGTTCGGTTACAGCAGATAAAATAGCTGGTAATACAATTAATACAGCTAGATTAGTAGATGCTTCCGTCACTACGGCTAAAATAGCAAATGCTGGAGTTACAGCAGATAAAATAGCTGGAGGTGCAGTTACTACAGCTAGATTAGCAGACGATGCAGTAACGGCTGCAAAACTTGCTAATACATCCGTAACAGCTGGTAGCTATGGTTCAGCCACAGCTATCCCTGCTATTACAGTTGACGCACAAGGACGTGTTACAGCTGCATCTACAAACACAGTAAATACAACAACAAACTTAGCTACTACAACAGCAACTGGTTCTGTGACTGTAACTAGCAGTACAGGAAACAATGCTACAATAAGTGAAGCTACAGGCTCTGCTGCTGGAGTAATGTCCACAGCTCATCATGACAAACTAGATGGTATAGCATCTTCAGCTAATAACTATAGCCACCCTAATCATAGCGGTGATGTAACTTCGTCTGGAGATGGGGCAACAACGATTGCTAATGATGCAATTACAGACGGTAAAATAGCAACAAATGCAGTTACAACCAATAAGATAGCAGCAAATGCTGTAACAACAGGTAAGTTATTAAACGGAAATGTAACTGAAACTAAACTAGCAAATAACGCAGTTACACAAGCAAAGATAGCAGCTGGTGCAGTAGGAACAACTGAACTTGCTGGTACATCCGTAAGTTCTGGAAAGTTAGCAACAAACGCAGTCACAGAAGCAAAGATTGCAGATGATGCAGTAACTCAAGGTAAGATTGCAGATAATGCAGTTAATGAAGCTCGGTTACAAATATCTAACGGTGGATCTAATGGTCAAGTATTAACAAAACAATCTGGTAATACAGGTGGTCTTACTTGGGCAACCATCAGTGCTGACGGTGGTAATGCAGCAACAGTTGATGGAATAGATTCGTCCTCATTTTTGAGGTCAGATGCTGCCGATACAGCTGGAAGTGATATTACATTTAGTGGTGGTGCTGGTGCTATAAATATTGCTGCTAACAGTGATATTAGATTGGCTAGTGGTGACTGGACTGGAAATAGTTTAGGTAAGATACAACATCATAGTAATGCTTTATATATTACTGGTGGGTCAAATGGAATCATTTTCAGATGTGGTGGTAGCGGTAATAGTGATAGATGGCGTGTGGAACAAGATGGTACACTACGTCCAAATAGTAACAACTCTTATGATATAGGTAGTAACTCTTATCGTGTAAAAAATATACATACACACGATTTAAACTTATCCAATGAAGGTAGCTCTAACGATGTAGATGGTACATGGGGTAACTGGACTATACAAGAAGGAGAAGAAAATCTATTCTTAATTAATCGCCGTAATAATAAAAAGTATAAATTCAATCTTACGGAGGTTTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
de1ce884b35319ed46b547b5f12763595c31fef4d4d7237fd58a11def3a1f281
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6397
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage NATL2A-133 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank