Protein

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Genbank accession
GENB_c3ca4e4076ee [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,53
Protein sequence
MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRVTWHSNEPSDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAHDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDGIGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV
Physico‐chemical
properties
protein length:771 AA
molecular weight: 85247,20050 Da
isoelectric point:4,94899
aromaticity:0,10895
hydropathy:-0,27328

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_c3ca4e4076ee
1 771
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,9331
Central domain 175 373 200 0,5536
C-terminal 374 771 397 0,2569
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-174
Central
175-373
C-terminal
374-771

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PA11
[NCBI] 		347327 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DQ163915.1_CDS_[complement(29472..31787)] [NCBI]
Genbank nucleotide accession
DQ163915.1 [NCBI]
CDS location
range 29472 -> 31787
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
0dbfe0875a1d74645c18276faf6c12f05cd52372d4e3a7a457697cac1803e150

                    

                    
                      ColabFold
                    
                  

                  

                  

                    

                      Source
                      ColabFold
                    

                    

                      Method
                      ColabFold
                    

                    

                      Resolution
                      0,3043
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50