Protein

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Genbank accession
WMM35241.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,71
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTAAVEASAASAAAAKDSEIAAKESETNAKDSENLAAIYATSSETSATQSAASATEAERQAGLSKDSADASAASATEAGTYKDAAELAAQNAETSRRLAEQAKTAAQQAQTAAETAKAGAETAKEGADAAAITAGEHAAAAKQSELNAKESEVNAAGSATEAGDKAIDATTEADRAKAEADRAAQIVDSKLDKEDISGFIKVYKTKEEADTDVSSRVLGEKILVWNQTDSKYGWYKVAGTVEAPVLELAETEQKLVSINNVRADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVTEEQWQAGATLYFSTGDGSTTFRLPDMMQGQAFRAPTKGEEDAGAIKEQIPYITTVNGIGPADDTGAIKLPYVAMVNGTIRPDESGNISLGNVVTKNVWDGINGEVLLRGAFGLGGAGLTLNEPDLVSLFKAMRAFGSGYYRNDTGIGGLPSYSAGFYSKTADTHSFICPQYSSGIVFVGTINDNQLDGENPTIHTNILYGSANKPDLNNDTQGILAINNGGTGATNAAGARANIELGEVNTPTFAQVAASLYNGFNSGLFYMRNHDASRNLISYSSIYNELQGSIAKTTIRTTRENGNTSFYQFDENGEFSAQKIKIGANYSFTMEGGEQNNLQLYAGSNVPLDDWANFTRYNWYNDMSLSGAVRSGSDKIKCHRIRVHSPGIDSQDFDFYPQGYLQTRAVNAGALYNNHGWGIEASQSGNAIPYNTISTVNNNGSFSPVVAGGTSTPNGYNIRFAIGMLSPGATGWSRTILKLLGDTDKHRGFEFNVDGSLGTWANAPGDMWGVGYDFAKNPTSDRDLKKEIVYTDGKESYDRVMQWLPTMFKYKWGNTQRYGLIAQDLAKIDLQYVKIVPGSPVFEDVIGVDEEGNEYVDRQIETDRADDTLALDSNVILTDMACAMVYMGNKMNKLEQELEQLKQAVTSLTPL
Physico‐chemical
properties
protein length:1019 AA
molecular weight: 108973,96660 Da
isoelectric point:4,63234
aromaticity:0,08243
hydropathy:-0,38783

Domains

Domains [InterPro]
DC_0608
ATT
2–575
DC_0608 IPR030392
PTHR47372
Unmapped
49–236
PTHR47372 DC_0195
Coil
Unmapped
125–145
Coil IPR030392 Coil
WMM35241.1
1 1019
Architecture
ATT
STR
ATT 2-575 | STR 576-1019
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM35241.1
1 1019
Domain Start End Length (AA) Confidence
N-terminal 1 500 500 0,9028
Central domain 501 699 200 0,2282
C-terminal 700 1019 319 0,8706
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-500
Central
501-699
C-terminal
700-1019

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage EH4
[NCBI] 		2986509 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM35241.1 [NCBI]
Genbank nucleotide accession
OR413345.1 [NCBI]
CDS location
range 80888 -> 83947
strand -
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAATATACAGTAGTTTTAGGTAATTCTATTAGTTCTATTACTGCTGGTGAACTAACTGCTGCTGTAGAAGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCTGAGATTGCAGCAAAAGAATCTGAAACAAATGCTAAGGACTCGGAGAACCTAGCTGCAATTTATGCTACTTCTTCTGAAACATCTGCAACTCAATCTGCGGCATCTGCTACCGAAGCAGAGAGACAAGCTGGTTTATCTAAAGATAGTGCTGATGCCTCTGCAGCATCTGCTACTGAAGCAGGCACCTATAAAGATGCTGCTGAACTTGCTGCTCAAAATGCGGAGACTAGTCGTAGACTTGCCGAACAAGCTAAAACTGCGGCTCAACAAGCTCAGACAGCTGCAGAGACAGCAAAAGCTGGAGCTGAGACAGCTAAAGAGGGAGCAGATGCTGCGGCTATAACTGCTGGAGAACACGCTGCTGCTGCTAAGCAATCAGAATTAAATGCTAAGGAATCTGAAGTTAATGCTGCTGGTTCTGCTACCGAAGCGGGGGACAAAGCTATTGATGCTACTACCGAGGCAGATCGTGCTAAGGCTGAAGCCGATCGCGCAGCTCAGATTGTAGATAGTAAGTTGGATAAAGAAGATATATCCGGCTTTATCAAAGTCTACAAGACCAAAGAAGAAGCGGATACTGACGTTAGTAGTCGTGTGCTAGGTGAAAAGATCCTAGTGTGGAACCAAACTGACTCAAAATATGGATGGTATAAAGTAGCTGGGACGGTTGAAGCTCCAGTGCTAGAGTTAGCAGAGACAGAGCAAAAGCTAGTTTCTATTAACAATGTTCGTGCAGATGACGCAGGTAACGTACAGATTACTCTTCCTGGTGGTAATCCCTCTTTATGGTTGGGCGAAGTTACTTGGTTCCCTTATGATAAAGATTCAGGTGTTGGCTACCCTGGTGTTCTTCCTGCTGATGGTCGTGAAGTTCTTCGTGTAGACTATCCAGATACTTGGGAAGCTATTGAGGCTGGCTTAATCCCTTCTGTTACTGAAGAACAATGGCAAGCTGGTGCAACTCTTTACTTCTCCACTGGTGATGGATCTACGACGTTCCGTTTACCAGATATGATGCAAGGGCAAGCATTCCGCGCTCCAACTAAGGGAGAGGAAGATGCTGGCGCAATTAAAGAGCAAATTCCCTATATCACTACTGTGAATGGAATTGGTCCTGCTGATGATACCGGAGCTATTAAACTTCCTTATGTAGCAATGGTTAACGGAACTATTCGCCCAGACGAGAGTGGTAATATTTCTCTAGGTAACGTTGTTACTAAGAATGTTTGGGATGGCATTAATGGTGAGGTTTTACTTCGTGGTGCTTTTGGCTTAGGTGGTGCAGGACTCACTTTAAACGAGCCTGATTTAGTATCTCTTTTTAAAGCTATGAGAGCTTTTGGTTCTGGCTACTATAGAAATGACACAGGAATAGGTGGACTACCGTCATATTCTGCAGGATTTTATTCTAAAACTGCGGATACTCACTCATTTATTTGCCCCCAATACTCTAGTGGTATTGTTTTTGTCGGGACTATAAATGATAATCAATTAGACGGTGAAAATCCTACTATCCATACTAATATTCTATATGGTTCTGCAAATAAGCCTGATTTAAATAATGATACCCAAGGAATTCTAGCTATTAATAATGGCGGTACAGGGGCGACGAATGCAGCAGGTGCAAGGGCTAACATAGAATTAGGCGAAGTTAATACACCTACCTTTGCTCAGGTTGCCGCTAGCTTATATAATGGATTCAATTCTGGGCTGTTTTATATGAGGAACCACGATGCTTCTAGAAACTTAATTTCGTATTCCTCTATTTATAATGAGCTGCAGGGTAGCATTGCAAAGACAACAATTAGAACAACAAGGGAAAACGGAAATACTAGTTTTTACCAGTTTGATGAAAATGGGGAGTTTAGTGCTCAGAAAATAAAAATTGGTGCTAATTATAGTTTTACAATGGAAGGTGGTGAACAAAACAATCTTCAACTTTATGCTGGGTCTAATGTTCCTTTGGATGATTGGGCTAACTTTACTAGGTATAACTGGTATAATGATATGTCATTATCCGGGGCTGTTAGATCTGGAAGTGATAAAATTAAGTGTCATCGTATCCGTGTACATAGCCCTGGTATTGATAGTCAAGATTTCGATTTCTACCCGCAAGGTTACTTACAAACCAGGGCGGTCAATGCAGGTGCTCTTTACAATAATCATGGATGGGGTATAGAAGCATCACAATCAGGAAATGCAATTCCTTATAACACTATCTCCACTGTAAATAACAACGGATCATTCAGTCCGGTAGTCGCGGGAGGCACTTCAACTCCAAACGGTTATAACATACGTTTCGCAATTGGTATGTTATCCCCGGGCGCCACTGGATGGTCCAGGACAATACTCAAGCTGTTAGGTGATACCGATAAACATAGAGGATTTGAGTTTAACGTAGATGGTAGTTTAGGAACATGGGCAAATGCTCCCGGCGATATGTGGGGGGTTGGTTATGATTTTGCAAAAAACCCAACTTCAGACCGTGACTTAAAGAAAGAAATTGTTTACACAGATGGAAAGGAAAGTTATGACCGTGTTATGCAGTGGCTACCTACTATGTTTAAATATAAGTGGGGTAATACTCAAAGATATGGTTTGATTGCCCAGGATCTTGCAAAAATAGATCTTCAATATGTAAAAATCGTACCTGGCTCTCCAGTTTTTGAGGACGTTATTGGAGTAGATGAAGAAGGTAATGAATATGTTGATAGACAAATAGAAACTGATAGAGCAGATGACACACTTGCTCTTGATAGTAATGTTATTCTAACAGATATGGCGTGTGCAATGGTTTATATGGGTAATAAGATGAATAAACTGGAGCAAGAGTTAGAACAACTTAAGCAAGCTGTTACATCTTTAACGCCACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0da77ef2e8f60af4d40553f2619dae78f7473ab755a0cd74734c0fccb8dfb651
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5830
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Salmonella and Escherichia coli-specific bacteriophages collected from Minnesota Wastewater Treatment Plant Cortes Ortega,E., Hansen,E.G., Farmer,M.L., Martinez-Villalobos,J.M. and Bowden,S.D. 2024-11-27 — GenBank