Protein

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Genbank accession
AFC21384.1 [GenBank]
Protein name
phage tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADYNDKVVNAELILPEGGAGETFVDDGQFHTEDTTTVTLLGNGTSTTPLKATVIVDPASGNALPPASTMQEGDTYVIGTHYWTVVNQQWVDLGDFAGPQGQDGIGLVIKGSFTDTAFLPQEGNTEGDTYIIQEQMWVWTGDEDGWQPVGQVGPTGPQGATGATGPQGPKGDKGDKGDKGDQGPQGIQGLTGAQGPKGDKGDKGNDAAIVKLKGTKATEADLPSFGNAVADAWVVQENNHVWVWTSDGAWEDIGSVQGPKGDQGDVGPQGPQGQKGDQGPIGPDGATGPAGADGPQGIQGPIGPKGDKGDTGLTGPVGPQGEMGPGVEIIGKLDNSSELPSTGTLGQGYLINGDFWGWTGTTYENLGPIQGPQGEVGPTGPTGPQGSQGIQGVKGDQGTLWLNFARNPGPADGRVGDYFINKSTLEYFQKTSATVWASLGYMGGGNVYDTSSTTPQARTSSGWVNVPVLEAPTDSGYYVRVNSAWKKLDRYDLLVTSTTGAMDVSVSQVFKVDGTANKTMSFTNLPANRAMTIVIVFTGSGASLTWPGNLAWSNGTSVTLGTTRTVVTILWDGTNLTGTTSLTVN
Physico‐chemical
properties
protein length:585 AA
molecular weight: 60431,56060 Da
isoelectric point:4,27250
aromaticity:0,07521
hydropathy:-0,43829

Domains

Domains [InterPro]
IPR050149
98–411
IPR050149
IPR008160
149–205
IPR008160 IPR008160 G3DSA:1.20.5.320
AFC21384.1
1 585
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_GAP31
[NCBI] 		1141135 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cronobacter sakazakii
[NCBI] 		28141 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Cronobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFC21384.1 [NCBI]
Genbank nucleotide accession
JN882284 [NCBI]
CDS location
range 99961 -> 101718
strand +
CDS
ATGGCAGATTACAATGATAAGGTCGTTAACGCCGAACTGATCCTCCCAGAGGGCGGTGCGGGGGAGACCTTTGTTGATGATGGTCAATTCCACACGGAAGACACGACCACCGTCACACTTCTCGGTAATGGTACATCCACTACCCCACTGAAGGCAACTGTTATTGTAGATCCTGCTTCCGGAAACGCACTTCCACCTGCATCAACAATGCAGGAAGGCGATACATATGTTATTGGAACACACTACTGGACTGTTGTAAACCAGCAATGGGTTGACCTTGGAGACTTCGCTGGTCCACAGGGTCAGGATGGTATCGGTCTGGTAATCAAAGGATCTTTCACCGACACTGCATTCCTTCCACAAGAAGGGAACACCGAAGGTGATACTTACATCATCCAGGAACAGATGTGGGTTTGGACCGGAGATGAAGATGGTTGGCAACCAGTAGGGCAAGTTGGACCAACTGGTCCACAGGGTGCCACTGGTGCTACAGGTCCACAAGGACCTAAAGGTGATAAGGGTGACAAGGGGGATAAGGGAGACCAAGGTCCTCAAGGCATCCAAGGTCTTACCGGAGCACAAGGTCCAAAGGGAGACAAAGGCGACAAAGGTAACGATGCTGCCATTGTTAAACTGAAAGGGACCAAGGCTACTGAAGCTGATCTTCCGTCCTTTGGTAACGCTGTCGCAGATGCTTGGGTTGTACAGGAAAACAACCACGTATGGGTTTGGACATCAGATGGTGCTTGGGAAGATATTGGCTCTGTACAGGGTCCGAAGGGAGACCAAGGCGATGTCGGTCCTCAAGGTCCACAGGGACAGAAAGGCGATCAAGGACCAATCGGTCCAGATGGTGCCACTGGTCCGGCAGGTGCAGACGGCCCTCAAGGTATTCAGGGACCAATCGGTCCAAAAGGCGACAAAGGGGACACAGGTCTAACTGGTCCGGTAGGCCCTCAAGGTGAAATGGGTCCTGGTGTAGAGATCATCGGCAAACTGGACAACAGTTCTGAACTTCCTTCTACTGGTACGCTGGGTCAGGGTTACTTGATCAATGGCGATTTCTGGGGATGGACAGGAACAACCTACGAAAACCTTGGGCCTATTCAAGGTCCTCAAGGGGAGGTTGGTCCAACAGGACCTACTGGTCCACAGGGTAGTCAAGGGATTCAGGGTGTTAAAGGTGACCAAGGTACTCTTTGGTTAAACTTTGCACGTAACCCAGGTCCTGCTGATGGTCGAGTTGGGGATTACTTCATTAACAAATCCACACTTGAATATTTCCAGAAAACCTCTGCTACGGTATGGGCTTCTCTCGGATATATGGGTGGTGGTAACGTTTATGATACCTCCTCTACCACACCACAAGCCCGTACAAGTTCAGGTTGGGTAAACGTACCAGTTCTTGAAGCACCTACTGACAGTGGTTATTATGTTCGTGTAAACAGTGCATGGAAGAAGCTTGATCGTTACGACCTTCTTGTGACTTCTACAACTGGGGCAATGGACGTTAGCGTGTCACAAGTCTTCAAGGTTGATGGTACTGCGAACAAGACCATGAGCTTCACAAACCTCCCTGCTAACCGAGCGATGACAATCGTGATCGTGTTCACGGGTTCCGGTGCGTCCCTGACGTGGCCTGGAAACCTAGCATGGTCAAACGGTACGTCAGTGACTCTTGGAACAACCCGTACAGTGGTTACTATCCTTTGGGATGGTACAAACCTGACAGGTACTACGTCCTTAACGGTTAACTGA

Tertiary structure

PDB ID
96cd93e63877d2b6981b201c403e95906ebc6ce294ffa4a8e24bf849bff113c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7249
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50