Protein

View in Explore
Genbank accession
WDS51313.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MNPQFAQPKGSTSKETNKDSIARKFGCKKSEVVYAKSGQSLSGYKVIYDKVSQRAYALPSNIGAVAVTSLVDGVLTHSGGTVDLGELAVLRGEFVALIEDFSDGFAIHTKNEMIRSNNSFYRWGGSLPKVVSSGLTIGNTGGVSGSAWIFVKNTASEKETYMSNWVSIGEDISGIMNDLLNAYDTIYLDIDVGLSSNVVNNLDGKRIIGNGNKINLLGNSFDTNKGAIELTGNYTEVSGVVFTTTTATVTPLRLGNTSYGSTDNTRRVGVRCNKCVFENTGFKGPNQGNLVVIGALYPEITYPRFVGVSRAGGNMEVLGCKGGYVSEGYAENGLLINFHGTSADGIGFPTTDFQFINCEGVMNSSVLGDVEGVVGGNNNIKFSRGCSGCKIIGGKFVSVSAGSFNGNDHVIAIQGCSNNTVEGVVVQMNNNGDYKSAFGISDHNVSLTDSYDNVIQNCFVQINTPGQYNRILQIQSNAGKSIRRNKLINVSFNCYNGSNTVDAVCEQTSTTSGLVSDTQILGCTGLGVTNVLLNRSGLASTAITYLQGNRIGTVMNSTVLNSGVVRIIDQPISVIVNGSGVLTSAVNCTVSKTSPGVWVINSFTSMNKLAVSFSSPGTGRYCVITKTSDYSWTITLYNPSAVVTEMEFNLIIG
Physico‐chemical
properties
protein length:653 AA
molecular weight: 69207,00800 Da
isoelectric point:6,92597
aromaticity:0,07963
hydropathy:-0,02466

Domains

Domains [InterPro]
IPR040775
RBD
100–151
IPR040775 DC_2141
WDS51313.1
1 653
Architecture
RBD
STR
RBD 100-151 | STR 152-653
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS51313.1
1 653
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,9952
Central domain 173 553 382 0,9847
C-terminal 554 653 99 0,9647
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-553
C-terminal
554-653

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SeF3a
[NCBI] 		2876784 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS51313.1 [NCBI]
Genbank nucleotide accession
ON809763.1 [NCBI]
CDS location
range 147316 -> 149277
strand +
CDS
ATGAATCCGCAATTTGCTCAACCAAAAGGTTCTACTTCAAAAGAAACGAATAAAGATAGCATCGCCCGTAAATTTGGGTGCAAAAAGTCGGAAGTCGTTTATGCGAAATCAGGGCAGTCCTTGTCTGGTTATAAAGTGATCTACGATAAGGTATCTCAACGTGCCTACGCTCTCCCTTCTAACATTGGTGCTGTAGCGGTCACCAGTTTGGTGGACGGTGTCCTCACGCACTCTGGAGGCACCGTAGATTTGGGAGAACTGGCCGTTTTGCGTGGGGAATTTGTTGCGTTAATAGAAGATTTTTCTGATGGATTTGCAATTCACACCAAAAATGAAATGATAAGAAGCAATAATTCCTTTTATCGTTGGGGTGGTTCTCTTCCAAAAGTTGTTTCTTCAGGGTTGACAATTGGGAACACAGGCGGAGTTTCTGGTTCAGCTTGGATTTTTGTAAAGAATACAGCTAGTGAAAAAGAAACTTACATGTCAAATTGGGTTTCTATTGGGGAAGATATTTCCGGCATAATGAATGACCTTTTAAATGCGTATGATACAATTTATTTGGATATTGATGTTGGGTTATCGAGTAATGTGGTGAATAATTTAGATGGTAAACGCATCATCGGAAATGGAAACAAGATCAATTTGTTGGGGAATTCTTTTGACACGAATAAAGGAGCTATAGAATTAACTGGAAATTATACTGAGGTTTCTGGTGTGGTGTTTACGACTACCACAGCGACAGTAACACCTTTGCGTTTAGGGAACACTTCTTACGGTTCAACCGATAATACTCGGCGTGTTGGTGTCCGGTGTAATAAATGCGTGTTTGAAAATACAGGGTTTAAAGGACCGAACCAAGGTAATTTGGTTGTTATAGGCGCACTATACCCAGAAATAACATACCCTCGGTTTGTTGGGGTTTCTCGTGCTGGGGGTAACATGGAAGTTCTTGGTTGTAAAGGTGGGTATGTTTCCGAAGGCTATGCAGAAAATGGTTTGCTAATCAATTTCCATGGGACATCCGCAGACGGGATCGGATTTCCAACGACTGATTTCCAATTCATTAACTGTGAAGGGGTAATGAATTCTTCTGTTTTAGGAGACGTAGAAGGAGTTGTGGGTGGAAATAACAATATCAAATTTTCTCGAGGATGTTCTGGGTGTAAAATAATTGGAGGGAAGTTTGTTTCCGTATCAGCGGGATCTTTTAATGGGAATGATCATGTTATAGCGATCCAGGGGTGCAGTAATAATACAGTTGAAGGCGTTGTTGTTCAGATGAACAATAACGGTGATTATAAATCTGCGTTTGGGATATCAGATCATAATGTTTCATTAACAGATAGTTATGACAATGTTATTCAAAATTGTTTTGTACAGATCAATACCCCAGGCCAATATAATCGGATATTGCAGATTCAGTCTAATGCCGGAAAATCAATACGGCGCAATAAATTGATAAATGTATCTTTTAATTGTTATAACGGAAGTAATACGGTTGATGCCGTTTGTGAGCAAACTAGCACCACTTCAGGTTTAGTGTCAGATACCCAAATATTGGGTTGTACTGGTCTGGGTGTTACGAATGTATTGTTGAACAGATCAGGGTTGGCATCTACTGCGATTACATATTTACAAGGGAACCGTATTGGAACTGTTATGAATTCAACCGTATTGAATTCTGGTGTTGTGAGGATTATTGACCAACCAATATCTGTAATTGTGAATGGTTCTGGTGTCCTTACTAGTGCCGTGAATTGTACGGTGTCTAAGACGTCGCCTGGTGTTTGGGTAATAAATTCTTTCACAAGTATGAATAAATTGGCTGTATCTTTTAGTTCTCCAGGTACTGGTAGATATTGTGTTATTACAAAAACCAGTGATTATTCGTGGACAATCACATTGTACAACCCATCAGCAGTTGTAACAGAAATGGAATTTAATCTTATAATCGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e34a7fa072d12d868da3ae9a1d32095872a5224bd2d5139d976a81c83887cb0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7710
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50