Protein

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Genbank accession
ALO80256.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAEPIIKNKNIQDIPITKVVGLEDALANSTGGGNEYNNIFRDSSNSGLTGAVNGVNISFTVSNNEYNVGTLNVYRNGQLYTNGSGITETSPSTGTFTLEDAPNTGDFIYATYQVGTTVSVSLNTVAPEQFGADPTGVVDSSDAFEDAFNDGRKVVLGHNATYLILQNKDFTRAGTIEVEGNGSTIITNPSVRQSRLFLFSTTVDLIKIKDLNVDGKNFLGVAFYIQTNFDFNNIRIKNIYDDVSAALAFRVDVGKQFTTSNFTNCYVDNVNAPIGGSIGDASGACRAIMVNWNYTDEPTQIRIKGGKYSNVFGNDGDIFQLAQANNNHTHNCKTIVEDVILENWSRRAIKGTSSGIELYRVRFISTVVGDPRTIGGTPSGMLTFSIHNSTTTPNERNKYGKAIDCIFDNRNGYDGRILATNTGSLQIKGCTFINSQFVFNSVVGNTELIDNTFQGQSSYMYNTDNPVFEGITNIKRNTYTREAGANGRGLFDLGSNTNTYKNINIENNTIIINTDGTEIVFGIGSFGSGTTLENVLIKNNTILRTVAGSRKELIRIDGDIIGGVSIIGNYQESVDGATGFSSGVGIDINGTGTPLIRDNYHSSGQQYPDSI
Physico‐chemical
properties
protein length:611 AA
molecular weight: 66048,20630 Da
isoelectric point:4,91847
aromaticity:0,09002
hydropathy:-0,28363

Domains

Domains [InterPro]
DC_1402
ATT
1–122
DC_1402
IPR012334
STR
116–369
IPR012334
IPR011050
STR
119–594
IPR011050
DC_1402
ATT
119–190
DC_1402
ALO80256.1
1 611
Architecture
ATT
STR
ATT 1-190 | STR 191-594 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALO80256.1
1 611
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9931
Central domain 142 599 459 0,9902
C-terminal 600 611 11 0,7280
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-599
C-terminal
600-611

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi4:1_18
[NCBI] 		1747285 Uroviricota > Caudoviricetes > Lightbulbvirus >
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALO80256.1 [NCBI]
Genbank nucleotide accession
KT962246 [NCBI]
CDS location
range 60241 -> 62076
strand -
CDS
ATGGCAGAACCAATTATAAAGAATAAAAACATTCAAGATATACCTATCACAAAAGTGGTGGGCCTTGAAGATGCACTAGCTAACTCTACAGGAGGTGGTAATGAATATAATAACATATTTAGAGACTCTAGTAATTCAGGATTAACAGGAGCTGTAAATGGAGTTAACATTTCCTTTACTGTTTCAAATAATGAATATAATGTAGGGACACTAAATGTATATAGAAACGGACAACTATACACTAATGGTTCTGGCATAACAGAAACATCTCCTTCAACTGGTACTTTTACTTTAGAAGACGCTCCTAATACAGGAGATTTTATTTACGCAACATATCAAGTAGGAACTACAGTATCTGTAAGCTTAAATACAGTTGCCCCAGAACAATTTGGAGCAGACCCTACAGGTGTTGTAGATAGTAGTGATGCGTTTGAAGATGCATTTAATGATGGGAGAAAAGTTGTGTTAGGTCATAATGCTACCTATTTAATTTTACAAAATAAAGATTTTACTAGAGCAGGAACAATAGAAGTAGAAGGTAATGGTTCAACAATCATAACCAACCCTTCCGTTAGGCAATCTAGATTATTTTTATTTTCTACAACTGTAGATTTAATTAAAATTAAAGATCTAAATGTAGATGGTAAAAACTTTTTAGGAGTAGCTTTTTATATTCAAACAAACTTTGATTTTAATAACATTAGAATTAAAAATATATATGACGATGTTTCAGCAGCTTTAGCTTTTAGAGTAGATGTAGGTAAGCAATTTACTACGTCTAATTTCACAAACTGTTACGTTGATAATGTAAATGCGCCTATCGGAGGTAGTATAGGTGATGCTTCTGGGGCTTGTAGAGCCATTATGGTTAACTGGAATTACACAGACGAACCAACTCAAATAAGAATAAAAGGTGGTAAGTATAGCAATGTATTTGGTAATGATGGTGATATTTTTCAATTAGCTCAAGCTAATAATAACCACACTCATAACTGCAAAACTATAGTTGAAGATGTTATATTAGAGAACTGGTCAAGAAGAGCAATCAAAGGTACTAGCTCAGGAATAGAGCTATATAGAGTTAGATTCATAAGTACTGTTGTTGGTGATCCTAGAACAATAGGTGGAACTCCTTCTGGAATGCTTACATTTTCAATACATAATTCAACTACTACTCCTAATGAAAGGAACAAATATGGTAAAGCTATAGATTGTATTTTTGATAACAGAAATGGCTATGATGGTAGAATCTTAGCAACAAATACTGGTAGCTTGCAAATAAAAGGATGCACATTTATAAATTCTCAATTTGTATTCAACTCTGTTGTTGGTAACACTGAACTTATAGATAATACTTTTCAAGGTCAATCTTCTTATATGTATAATACAGATAATCCAGTATTCGAGGGTATTACTAATATAAAAAGAAATACCTACACTAGAGAGGCTGGTGCAAATGGTAGGGGTTTGTTTGATTTAGGGTCAAATACCAACACTTATAAAAACATCAACATAGAGAACAATACTATAATTATTAACACAGATGGAACTGAAATTGTATTTGGAATAGGTAGTTTTGGTTCTGGTACAACTTTAGAAAATGTGCTTATAAAAAACAATACAATTCTAAGAACTGTAGCAGGTTCAAGAAAAGAGCTAATAAGAATAGATGGAGATATAATTGGTGGTGTATCTATTATAGGTAATTATCAAGAAAGCGTAGATGGAGCTACTGGATTTAGTTCAGGAGTAGGAATAGATATTAATGGAACAGGAACACCATTAATAAGAGATAATTATCATAGTTCAGGTCAACAATATCCTGATAGCATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
26f09358a30453822d51dbe3598d5398809c815d3b57349b8730ca5e90f69c79
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7815
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large-scale maps of variable infection efficiencies in aquatic Bacteriodetes phage-host model systems Holmfeldt,K., Solonenko,N., Howard-Varona,C., Moreno,M., Malmstrom,R.R., Blow,M.J. and Sullivan,M.B. 2016-06-27 — GenBank