Protein

View in Explore
Genbank accession
ALO80256.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAEPIIKNKNIQDIPITKVVGLEDALANSTGGGNEYNNIFRDSSNSGLTGAVNGVNISFTVSNNEYNVGTLNVYRNGQLYTNGSGITETSPSTGTFTLEDAPNTGDFIYATYQVGTTVSVSLNTVAPEQFGADPTGVVDSSDAFEDAFNDGRKVVLGHNATYLILQNKDFTRAGTIEVEGNGSTIITNPSVRQSRLFLFSTTVDLIKIKDLNVDGKNFLGVAFYIQTNFDFNNIRIKNIYDDVSAALAFRVDVGKQFTTSNFTNCYVDNVNAPIGGSIGDASGACRAIMVNWNYTDEPTQIRIKGGKYSNVFGNDGDIFQLAQANNNHTHNCKTIVEDVILENWSRRAIKGTSSGIELYRVRFISTVVGDPRTIGGTPSGMLTFSIHNSTTTPNERNKYGKAIDCIFDNRNGYDGRILATNTGSLQIKGCTFINSQFVFNSVVGNTELIDNTFQGQSSYMYNTDNPVFEGITNIKRNTYTREAGANGRGLFDLGSNTNTYKNINIENNTIIINTDGTEIVFGIGSFGSGTTLENVLIKNNTILRTVAGSRKELIRIDGDIIGGVSIIGNYQESVDGATGFSSGVGIDINGTGTPLIRDNYHSSGQQYPDSI
Physico‐chemical
properties
protein length:611 AA
molecular weight: 66048,20630 Da
isoelectric point:4,91847
aromaticity:0,09002
hydropathy:-0,28363

Domains

Domains [InterPro]
IPR012334
116–369
IPR012334
IPR011050
119–594
IPR011050
ALO80256.1
1 611
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi4:1_18
[NCBI] 		1747285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALO80256.1 [NCBI]
Genbank nucleotide accession
KT962246 [NCBI]
CDS location
range 60241 -> 62076
strand -
CDS
ATGGCAGAACCAATTATAAAGAATAAAAACATTCAAGATATACCTATCACAAAAGTGGTGGGCCTTGAAGATGCACTAGCTAACTCTACAGGAGGTGGTAATGAATATAATAACATATTTAGAGACTCTAGTAATTCAGGATTAACAGGAGCTGTAAATGGAGTTAACATTTCCTTTACTGTTTCAAATAATGAATATAATGTAGGGACACTAAATGTATATAGAAACGGACAACTATACACTAATGGTTCTGGCATAACAGAAACATCTCCTTCAACTGGTACTTTTACTTTAGAAGACGCTCCTAATACAGGAGATTTTATTTACGCAACATATCAAGTAGGAACTACAGTATCTGTAAGCTTAAATACAGTTGCCCCAGAACAATTTGGAGCAGACCCTACAGGTGTTGTAGATAGTAGTGATGCGTTTGAAGATGCATTTAATGATGGGAGAAAAGTTGTGTTAGGTCATAATGCTACCTATTTAATTTTACAAAATAAAGATTTTACTAGAGCAGGAACAATAGAAGTAGAAGGTAATGGTTCAACAATCATAACCAACCCTTCCGTTAGGCAATCTAGATTATTTTTATTTTCTACAACTGTAGATTTAATTAAAATTAAAGATCTAAATGTAGATGGTAAAAACTTTTTAGGAGTAGCTTTTTATATTCAAACAAACTTTGATTTTAATAACATTAGAATTAAAAATATATATGACGATGTTTCAGCAGCTTTAGCTTTTAGAGTAGATGTAGGTAAGCAATTTACTACGTCTAATTTCACAAACTGTTACGTTGATAATGTAAATGCGCCTATCGGAGGTAGTATAGGTGATGCTTCTGGGGCTTGTAGAGCCATTATGGTTAACTGGAATTACACAGACGAACCAACTCAAATAAGAATAAAAGGTGGTAAGTATAGCAATGTATTTGGTAATGATGGTGATATTTTTCAATTAGCTCAAGCTAATAATAACCACACTCATAACTGCAAAACTATAGTTGAAGATGTTATATTAGAGAACTGGTCAAGAAGAGCAATCAAAGGTACTAGCTCAGGAATAGAGCTATATAGAGTTAGATTCATAAGTACTGTTGTTGGTGATCCTAGAACAATAGGTGGAACTCCTTCTGGAATGCTTACATTTTCAATACATAATTCAACTACTACTCCTAATGAAAGGAACAAATATGGTAAAGCTATAGATTGTATTTTTGATAACAGAAATGGCTATGATGGTAGAATCTTAGCAACAAATACTGGTAGCTTGCAAATAAAAGGATGCACATTTATAAATTCTCAATTTGTATTCAACTCTGTTGTTGGTAACACTGAACTTATAGATAATACTTTTCAAGGTCAATCTTCTTATATGTATAATACAGATAATCCAGTATTCGAGGGTATTACTAATATAAAAAGAAATACCTACACTAGAGAGGCTGGTGCAAATGGTAGGGGTTTGTTTGATTTAGGGTCAAATACCAACACTTATAAAAACATCAACATAGAGAACAATACTATAATTATTAACACAGATGGAACTGAAATTGTATTTGGAATAGGTAGTTTTGGTTCTGGTACAACTTTAGAAAATGTGCTTATAAAAAACAATACAATTCTAAGAACTGTAGCAGGTTCAAGAAAAGAGCTAATAAGAATAGATGGAGATATAATTGGTGGTGTATCTATTATAGGTAATTATCAAGAAAGCGTAGATGGAGCTACTGGATTTAGTTCAGGAGTAGGAATAGATATTAATGGAACAGGAACACCATTAATAAGAGATAATTATCATAGTTCAGGTCAACAATATCCTGATAGCATATAA

Tertiary structure

PDB ID
26f09358a30453822d51dbe3598d5398809c815d3b57349b8730ca5e90f69c79
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7815
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large-scale maps of variable infection efficiencies in aquatic Bacteriodetes phage-host model systems Holmfeldt,K., Solonenko,N., Howard-Varona,C., Moreno,M., Malmstrom,R.R., Blow,M.J. and Sullivan,M.B. 2016-06-27 — GenBank