Protein

View in Explore
Genbank accession
XDJ14871.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MASNKTKLADANQKSAFDFDDDFESYFDDDFNTNKKKKPLQEFMAGFKDGLLDKNKNKSLLRAFLVNGAPKGYDRLFGAYDDLKRGATDLKDHLEKTNPGDLQYLFKRAESFLPSLKDKVSESTYDRLQSNIANKVDQYKYQIEANQDQKRVAIRRQQADDQKNMQEMLGEDLRSAVDQGTVVSQKLFNKGQQADDRRWNLDRIERGLRDQAQDKHNQYMSRGLAQAVDGITRMASYTEQVHYDFQRKGLELQFRSYIALRDMSKIAEATMDMQNKAFQALVRNTGLPDHLKSSMKDLLSMNMRQGIAQGGISMAGRSLSSFLGGYGSNVQNRVNQRASSTLSGIVQGLQTGESFSDFWDQRYNLAGGLAADAVHGGMRSYVAPMVGRMARPMMTRMSNKHGRGKHNQVGYMLDNMPAMMQEFVNNYQNSYGAKGVLQDMLRPFVPQFGLDTSTKSGSYQTIGQHTAFNQLTQRTITEILPGFQARILRELQRIRTGKEDIALTAFDITKGTWGTDKSAKDALQDRIVSKGTTRMVSGQISEALDKMDPENKLSKGARRALSERLMRDANTNKRFDPMRYGSKYGYKEGTSKETIAELESFFKEQFERDDKGKFADTAANHEKRKMYSDAFLDIRNVSRDPAAEIHRIIESGNTGMLREMGILETVEGQDRINYPMLWAMMSSQVSDTHAGDGYRYRESSGQVGDKNFVGPAFPGHASARAQNATIRFLEGPQAQRAKDAAKRGMGSAKDLMDQFRADPMQFMRDKYEAGLQGAKDKGGQLRDSAKAAADAAKAGGLPAVMEHFSAKEKLDMAKALLENTIEKEPPAMREARLKMAQALIASIDTAAEKGNQLLATETGQKAVAAGNQMLALGHDTAEQIRQSEAAGVVDLKLQEGKEVLIKATDMMQGKLIDVNTGKVIRRASDITGEVRNHLNQQVASASEVAQGLYSDRGKLMAQAREKLDSIQAVIKSTATNLAGQAKDKLDDMKDWCLEGKNEVIIKSRELLDGKYFDAESGEPIYSLDDIKGTLLDAQGRIIATGEELARGLRSMDGKKFDVPGMKEKASALAKQLWRGNTTSNILSMMGTAGSFMWKLARNTYARMTGDRDAYLPPNLKPILTVEKLKEGKYLNSKGEPYKSMGDINDSVIDADTGVALLDKGELKQLVDVNGKKHKIAKNRGLLRRMVKGAASGYWNLTKAYYRQLGKEFGMDAKAGAKTLLAPMGEFSKRQLANLSTTDQVLVQIRDAIRETVPKKNRKGSWMEKAEKKEQDAQNANGSDAKAEKERKGMFAGLTGAIGGLWDKLRGKKKDEEGDEDGEGGGILDTAQDALGTAADAKDLFGGRGGRRGRGAGRLGRMGSRIASSRVGQFVATQGGRMLATRGAMMVGTALAGLFSAPVLIGAAVVAGVGVAGYVGYKYYKSVNGELGNLRYLQYGVNGIRKRRKILALEKLLEKTAVRGQNAQLNLNADSGKEIMDIMGFSKDDEAEIHRFARWVDLRFKPVFIQWLRALDTVGQTQMSLADIDDKLDDKLKGTFLQEVQIEYGEGGPFSMRDNPFGDKEPLDDTIEETKEVFEKLKAKYKVDPEAEKKAGLPGVQPEASKDPDNVKRWEEGEAPANPAGTVVGAAATAAAKKAADEAKAVGKQGLEEKKKTAQDLSNKVNAIAKAAAVGSTAQFSNFVSNPVKLPNTTLPALDAIRMRAYGLETLDQAFVEALMTMEKSVHRQSKADQTGMIKFNGNMEYFVGACGSLLGMKTSENGPERVKFVNWMNQRFMPVCEAFLTSLRVTYRGQPDQASTQIQLGDQVRIANAIIGAQSPDSTAVWSTPSIFVIAGELQDLKRLADIDLDDLKKKAAAVLSSPTQSAGAQEAGKNAAAGGKSFLDGITDTLSGAAKATGSFISGAVDGVGSALSGAVSGIKSFFGGSSDTSSGSSYSGSQTGQDVAAVEGQQFGYIQAGNGGSWEQIPMPTAKTAKGSRATMEAVAKMVGVPVEYLMIFCAMESGFDWTIKAGAGGSATGWFQFINSTWDWMLQQHSKKYGIPPDVGRRLRLDPRINALMGAEYMKYSMQVIKKGCGKDPTDIDIYLAHFLGPGTAVKWLKMPKNTVGAYAFPREAAANPSIFKGGRTLGQIEQSFDKRMDQFRAMASAGTSTGAAVPLKTEDVEKATAEEAAKKAEAEAKKDDKFIPGVSAMPGGPSVTGSTPTNAGTGGATQPGVTGGGATTAPAGGQTAPVGVMAPTQSQTESPDAGASSTGGNAYQQAQAAAQAAAAAKDAERAKQVGQETQGAQSILSINQEMLSVQKAQLEALKALVQGQGLGGQGNSMPKASPTRGANNSPFPVTV
Physico‐chemical
properties
protein length:2339 AA
molecular weight: 253532,08330 Da
isoelectric point:9,15343
aromaticity:0,06627
hydropathy:-0,52899

Domains

Domains [InterPro]
DC_0124
STR
1–983
DC_0124 Coil Coil G3DSA:1.10.530.10 Coil
PTHR47372
Unmapped
756–1666
PTHR47372 IPR023346
DC_0124
STR
952–2079
DC_0124
IPR008258
ENZ
1980–2100
IPR008258
XDJ14871.1
1 2339
Architecture
STR
RBD
STR 1-2106 | RBD 2107-2141 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage RVTF4
[NCBI] 		3236931 No lineage information
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ14871.1 [NCBI]
Genbank nucleotide accession
PQ015378.1 [NCBI]
CDS location
range 259854 -> 266873
strand +
CDS
ATGGCAAGCAATAAAACAAAACTGGCGGATGCAAACCAAAAATCAGCATTCGATTTCGATGACGATTTCGAGTCGTACTTTGACGACGATTTCAACACGAATAAAAAGAAGAAGCCCCTCCAAGAATTCATGGCGGGTTTCAAAGATGGTCTGCTGGACAAGAATAAAAACAAGAGCCTGTTACGGGCATTCTTGGTAAACGGTGCCCCTAAGGGCTACGACCGTTTATTTGGCGCTTACGATGATCTCAAACGTGGCGCTACTGATCTCAAAGACCACTTGGAGAAAACAAACCCAGGTGATCTGCAATACCTGTTCAAACGAGCCGAGTCTTTCCTGCCGTCCCTCAAGGACAAGGTCTCGGAAAGTACTTATGATCGCTTACAGTCGAACATAGCTAATAAGGTTGACCAGTATAAATATCAGATCGAAGCTAACCAAGATCAGAAGCGTGTCGCTATTCGTCGTCAACAGGCGGACGATCAGAAGAACATGCAGGAGATGCTCGGTGAGGATCTGCGCAGTGCTGTCGACCAAGGTACCGTAGTAAGTCAGAAGCTGTTTAATAAAGGACAGCAAGCTGATGACCGTCGGTGGAACCTCGACCGGATTGAACGTGGTCTTCGTGATCAAGCTCAAGACAAGCACAACCAGTACATGTCTCGTGGACTGGCTCAAGCTGTCGATGGCATCACCCGGATGGCTTCGTACACAGAACAAGTTCATTACGACTTCCAACGTAAGGGTCTGGAACTTCAGTTCCGCTCTTACATTGCTCTCCGCGATATGTCCAAAATCGCCGAAGCAACGATGGACATGCAGAACAAAGCTTTCCAAGCACTGGTGCGTAACACTGGCTTGCCAGACCACTTGAAGTCTTCGATGAAAGATCTGCTATCGATGAACATGCGTCAGGGTATCGCCCAAGGTGGTATCTCGATGGCTGGCCGTAGCCTCTCCAGCTTTCTGGGTGGCTATGGGAGCAACGTTCAGAACCGTGTGAACCAACGTGCTAGCTCGACACTGTCGGGCATCGTACAGGGCTTACAGACCGGTGAATCGTTCTCCGACTTCTGGGACCAACGCTACAACCTAGCGGGTGGTCTGGCTGCTGACGCCGTTCATGGTGGGATGCGTTCCTATGTCGCTCCGATGGTCGGTCGTATGGCTCGCCCTATGATGACTCGGATGTCGAACAAGCATGGTCGCGGTAAGCATAACCAAGTCGGTTACATGCTGGACAACATGCCAGCGATGATGCAGGAGTTCGTCAACAACTACCAGAACTCTTACGGTGCCAAAGGCGTACTGCAAGACATGCTGCGCCCGTTCGTCCCTCAGTTCGGACTGGACACATCTACCAAATCAGGTAGCTATCAAACGATTGGTCAGCACACCGCTTTCAACCAATTGACCCAGCGTACCATCACGGAAATCCTACCGGGCTTCCAAGCTCGTATCTTGCGCGAGCTGCAACGTATTCGTACAGGTAAGGAAGACATCGCCCTTACTGCTTTCGACATCACCAAGGGGACGTGGGGGACCGACAAGAGCGCTAAGGACGCCCTGCAAGACCGTATCGTTTCCAAAGGTACGACTCGCATGGTATCCGGTCAGATCTCTGAAGCTCTGGACAAGATGGACCCAGAGAACAAACTGTCTAAAGGTGCGCGTCGTGCTCTGTCCGAACGACTGATGCGCGACGCTAACACCAACAAACGTTTCGACCCAATGCGTTACGGTTCGAAGTACGGCTATAAAGAAGGAACCTCGAAAGAGACCATCGCAGAGCTGGAGTCGTTCTTCAAAGAACAATTCGAACGGGATGATAAAGGTAAGTTCGCAGACACTGCAGCTAACCATGAGAAGCGGAAGATGTATTCCGACGCTTTCCTCGACATCCGTAACGTATCGCGTGATCCAGCTGCTGAGATCCACCGCATCATCGAATCGGGTAACACCGGTATGTTGCGTGAGATGGGTATCCTGGAAACCGTAGAAGGTCAAGACCGTATCAACTATCCGATGCTCTGGGCGATGATGTCGTCTCAGGTAAGTGATACCCATGCTGGTGACGGCTATCGGTATCGTGAGTCGTCGGGTCAAGTCGGTGACAAGAACTTCGTAGGTCCTGCTTTCCCTGGCCATGCATCAGCGCGTGCTCAAAACGCAACCATTCGCTTCCTGGAAGGTCCACAAGCACAACGTGCTAAGGATGCAGCCAAACGCGGCATGGGTTCCGCTAAAGATCTCATGGATCAATTCCGTGCCGATCCAATGCAGTTCATGCGTGACAAGTACGAAGCTGGTCTACAGGGTGCGAAGGACAAAGGTGGTCAACTCCGCGATTCCGCTAAGGCGGCAGCTGATGCCGCTAAAGCCGGTGGTTTGCCAGCAGTCATGGAACACTTCTCTGCCAAAGAGAAACTGGACATGGCTAAGGCACTGCTAGAGAACACGATCGAGAAAGAACCACCAGCGATGCGTGAAGCTCGTCTGAAGATGGCTCAAGCGCTGATCGCTTCTATCGACACGGCCGCTGAGAAAGGTAACCAACTGCTCGCTACCGAAACTGGTCAGAAAGCTGTTGCTGCCGGTAACCAGATGTTGGCCTTGGGTCATGACACCGCCGAACAGATCCGTCAATCGGAAGCTGCAGGTGTTGTCGACCTGAAGCTCCAGGAAGGTAAAGAAGTACTCATCAAAGCCACTGACATGATGCAGGGTAAGCTGATCGACGTGAACACCGGTAAGGTTATCCGTCGTGCTTCCGATATCACTGGTGAAGTTCGTAACCACCTGAACCAACAAGTTGCCTCTGCTTCCGAAGTCGCACAGGGTCTCTACTCTGATCGCGGTAAGCTGATGGCACAAGCCCGTGAGAAACTCGACAGTATCCAAGCCGTCATTAAATCCACTGCGACTAACCTGGCTGGCCAGGCTAAAGACAAACTGGATGACATGAAAGACTGGTGCCTGGAAGGCAAGAACGAGGTCATCATAAAGTCTCGTGAACTGCTGGATGGTAAATACTTCGATGCTGAATCGGGTGAACCGATCTACTCACTCGACGACATTAAAGGTACGCTGTTAGATGCCCAAGGTCGTATCATCGCAACGGGTGAAGAACTCGCTCGCGGTCTTCGGTCGATGGATGGCAAGAAGTTCGATGTTCCTGGCATGAAAGAGAAAGCTTCTGCTCTGGCTAAGCAACTCTGGCGAGGTAACACTACGTCGAACATTCTGTCGATGATGGGAACTGCTGGTTCCTTCATGTGGAAGCTGGCTCGTAACACGTATGCTCGGATGACGGGTGATCGCGATGCTTACTTGCCTCCTAACCTGAAGCCGATCCTTACAGTTGAGAAACTGAAAGAAGGCAAGTACCTTAACTCCAAAGGCGAACCCTACAAATCGATGGGTGATATCAATGACTCGGTAATTGATGCTGATACTGGTGTGGCATTGCTGGACAAAGGTGAGTTGAAACAACTCGTCGATGTCAACGGTAAGAAGCACAAGATCGCTAAGAACCGTGGTCTGCTCCGTCGGATGGTTAAAGGGGCAGCAAGTGGGTACTGGAACCTGACGAAGGCGTACTATCGTCAACTGGGTAAAGAGTTCGGCATGGATGCAAAAGCGGGTGCTAAAACCCTGCTGGCCCCAATGGGTGAATTCTCTAAACGTCAATTAGCCAACCTGTCCACTACCGACCAAGTGTTGGTACAGATCCGTGACGCCATCCGTGAAACCGTTCCGAAGAAGAATCGGAAAGGTAGTTGGATGGAGAAAGCCGAGAAGAAAGAACAAGATGCTCAGAATGCTAATGGTTCCGATGCGAAAGCAGAGAAAGAACGCAAAGGCATGTTCGCCGGGTTGACTGGTGCTATCGGTGGTCTGTGGGACAAACTGCGTGGGAAGAAGAAAGATGAAGAAGGTGATGAGGACGGCGAAGGTGGTGGGATCCTGGACACTGCACAAGATGCTCTGGGTACCGCGGCAGATGCTAAGGATCTGTTCGGCGGTCGGGGAGGCCGTAGGGGACGCGGTGCAGGCCGACTAGGTCGTATGGGTTCTCGGATTGCCAGCTCTCGGGTTGGTCAGTTCGTAGCTACCCAAGGTGGCCGTATGTTGGCTACCCGTGGTGCCATGATGGTTGGTACTGCTCTGGCTGGTCTGTTCTCTGCACCGGTTCTGATCGGTGCAGCTGTAGTTGCAGGTGTTGGCGTGGCTGGTTACGTCGGCTATAAATACTACAAGTCAGTTAACGGTGAGTTGGGTAACCTGCGTTATCTGCAGTACGGTGTGAACGGTATCCGTAAACGTCGTAAGATCCTGGCACTGGAAAAGCTTCTGGAGAAAACCGCCGTTCGTGGTCAGAACGCACAGTTGAACTTGAATGCCGACTCTGGTAAAGAGATCATGGACATCATGGGCTTCTCCAAAGATGACGAAGCCGAGATCCATCGGTTCGCTCGTTGGGTTGACCTACGCTTTAAGCCAGTGTTCATTCAGTGGCTCCGTGCACTCGATACCGTCGGTCAAACCCAAATGTCTCTGGCGGATATCGATGACAAGCTGGACGATAAACTGAAAGGCACGTTCCTCCAGGAAGTTCAGATCGAGTACGGTGAGGGTGGTCCGTTCTCAATGCGTGATAACCCATTCGGTGATAAAGAGCCGTTGGATGATACCATCGAAGAAACCAAAGAAGTCTTCGAGAAGCTGAAGGCCAAGTACAAGGTCGATCCAGAAGCCGAGAAGAAGGCTGGTCTCCCAGGTGTACAACCTGAGGCATCGAAAGATCCCGATAATGTCAAGCGTTGGGAAGAAGGTGAAGCTCCGGCTAATCCGGCAGGTACTGTCGTAGGCGCCGCTGCAACCGCTGCTGCGAAGAAAGCTGCAGATGAGGCTAAGGCCGTCGGTAAGCAAGGGCTGGAAGAGAAGAAGAAGACTGCGCAAGATCTGTCGAACAAAGTCAACGCAATCGCGAAGGCTGCAGCGGTAGGTTCCACTGCACAGTTCTCCAACTTCGTATCTAACCCAGTTAAGCTACCGAACACTACACTTCCAGCATTGGACGCGATCCGTATGCGTGCGTACGGTTTGGAGACTCTGGACCAGGCATTCGTTGAGGCTCTGATGACCATGGAGAAATCCGTGCATCGTCAATCCAAAGCGGATCAGACTGGAATGATCAAGTTCAACGGCAACATGGAATACTTCGTGGGTGCATGTGGTAGCTTGCTCGGGATGAAGACCTCGGAGAATGGTCCTGAACGAGTCAAGTTCGTGAACTGGATGAACCAGCGTTTCATGCCGGTGTGTGAAGCCTTCCTGACTTCTCTGCGGGTTACCTACCGCGGACAGCCAGACCAAGCATCTACCCAGATTCAGTTGGGTGATCAGGTTCGTATTGCAAATGCCATCATCGGGGCGCAGTCACCAGACTCTACAGCTGTGTGGTCCACGCCTTCGATCTTCGTTATCGCTGGTGAATTACAAGACCTGAAGCGTCTGGCCGATATCGACCTGGATGATCTGAAGAAGAAAGCTGCCGCTGTGTTGTCCTCGCCGACTCAATCAGCTGGCGCGCAGGAAGCGGGTAAGAACGCAGCGGCTGGTGGTAAGTCCTTCCTGGATGGTATCACCGACACGCTGTCCGGTGCTGCTAAAGCTACTGGTTCGTTCATCTCTGGCGCGGTCGATGGTGTGGGTAGTGCACTGTCCGGCGCGGTATCTGGTATCAAGTCGTTCTTCGGCGGTTCTTCTGATACGTCGAGTGGTTCGTCTTACAGTGGTTCTCAAACGGGTCAAGACGTGGCTGCTGTCGAAGGGCAACAGTTCGGCTATATCCAGGCGGGTAACGGCGGTAGCTGGGAACAGATCCCAATGCCAACTGCTAAGACGGCTAAGGGTTCTCGCGCAACCATGGAAGCGGTTGCCAAGATGGTTGGTGTTCCTGTTGAATACCTGATGATCTTCTGTGCTATGGAATCCGGTTTCGACTGGACCATTAAAGCAGGGGCAGGTGGTTCGGCCACTGGTTGGTTCCAGTTCATCAACTCGACCTGGGATTGGATGCTGCAACAGCATTCCAAGAAGTACGGTATTCCACCGGACGTAGGTCGTCGTCTCCGTCTCGATCCACGTATCAACGCCCTGATGGGTGCCGAGTACATGAAGTACTCCATGCAGGTCATCAAGAAGGGTTGTGGTAAAGATCCTACCGACATCGACATCTACCTGGCTCACTTCTTGGGGCCTGGTACTGCAGTGAAGTGGTTGAAGATGCCGAAGAACACTGTGGGAGCTTACGCCTTCCCTAGAGAGGCTGCAGCTAACCCATCGATCTTCAAGGGTGGTAGAACACTCGGCCAGATCGAACAGTCGTTCGACAAACGTATGGACCAGTTCCGTGCAATGGCTTCCGCTGGTACGTCCACTGGCGCAGCGGTCCCTCTGAAAACTGAGGACGTTGAAAAGGCCACGGCAGAAGAAGCCGCCAAGAAGGCAGAAGCTGAAGCCAAGAAAGATGACAAGTTCATCCCTGGTGTATCGGCAATGCCTGGTGGTCCTTCGGTCACAGGTTCGACTCCTACCAACGCAGGTACTGGTGGCGCTACACAGCCAGGTGTAACGGGTGGTGGTGCGACTACAGCTCCGGCTGGCGGTCAAACTGCACCAGTGGGTGTAATGGCGCCGACTCAATCGCAAACCGAGTCTCCGGACGCAGGTGCATCGAGTACGGGTGGGAACGCGTATCAACAAGCACAAGCCGCGGCACAAGCGGCAGCTGCAGCGAAAGATGCTGAACGCGCGAAGCAGGTCGGCCAGGAAACTCAAGGTGCACAGAGTATCCTGTCGATCAACCAAGAGATGTTGTCTGTACAAAAGGCACAACTCGAAGCTCTGAAGGCGCTGGTACAAGGCCAAGGGCTTGGTGGTCAGGGCAATAGTATGCCCAAGGCTTCACCCACACGGGGAGCAAACAACTCACCGTTCCCGGTGACTGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cf41049b2fa5f9952ffede13f7f8db25cae21d17870fbf519e8f1f7383015679
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5012
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50