Protein

View in Explore
Genbank accession
URG13721.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,78
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MKIHSGEASLNGVDGVFACGNGTGPKISGVTAMNNKRIGILAYGRTEAPTGFDVTNCNLLNNGLNSLCYTGIRSGSIADNVMGGTKSWSLKMEGKNGLLNPMGLTVCNNTFEVESVSGDIFANIGGYTDGGNPGIINVTDNKYNDRNPVHSIASYNRSKSLFRPSGRMGFTSAYTAAVGGSISVSLSFIKPDSNAADISSGIVEMQIGDTATMLAATTVSSATRNAGVELYNGATTNGKIIAAAAYGALTYSFTSTTAKTVYLKVRSPWGDAIISLTWS
Physico‐chemical
properties
protein length:279 AA
molecular weight: 28951,19920 Da
isoelectric point:8,61177
aromaticity:0,07527
hydropathy:-0,04301

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG13721.1
1 279
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0026
Central domain 11 199 190 0,8280
C-terminal 200 279 79 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-199
C-terminal
200-279

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage T751
[NCBI] 		2945939 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG13721.1 [NCBI]
Genbank nucleotide accession
ON323462.1 [NCBI]
CDS location
range 115091 -> 115930
strand -
CDS
ATGAAGATTCACTCAGGTGAAGCTAGTCTTAATGGTGTTGATGGGGTGTTTGCTTGTGGTAATGGTACTGGTCCAAAAATCAGTGGAGTTACTGCAATGAATAATAAACGCATTGGCATTCTTGCATACGGTCGCACGGAAGCCCCTACAGGGTTTGACGTGACCAACTGTAATTTATTGAATAATGGTCTCAATAGTCTTTGTTATACCGGTATACGCTCTGGCTCTATAGCAGATAATGTAATGGGTGGTACTAAATCCTGGTCTTTAAAAATGGAAGGTAAGAACGGTTTACTTAACCCAATGGGCCTAACTGTCTGCAATAACACCTTTGAAGTGGAGTCAGTCTCTGGTGATATATTTGCTAATATCGGTGGTTACACTGATGGTGGAAACCCCGGTATTATTAATGTCACCGACAACAAATATAATGATCGGAACCCAGTCCATTCTATAGCGTCCTATAATCGTTCTAAAAGTTTGTTTAGACCTTCTGGAAGAATGGGGTTTACTTCTGCGTATACTGCTGCTGTCGGTGGATCTATTAGTGTTTCTCTATCTTTCATAAAACCAGATTCCAACGCAGCTGATATTTCATCTGGGATAGTAGAGATGCAAATAGGTGACACAGCTACTATGTTAGCAGCTACAACCGTCAGTAGCGCGACCAGAAATGCTGGAGTTGAATTATATAACGGAGCCACTACAAACGGGAAAATCATAGCTGCCGCCGCTTATGGGGCTTTGACTTATTCCTTTACTTCCACTACAGCGAAAACTGTTTATCTCAAGGTACGATCTCCTTGGGGTGATGCGATAATTTCATTAACTTGGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1b4f5b47a69c82e4e1cc41c9cff1491d4001ada6e6bcc6537c252f4d9888ab23
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7126
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phenotypic and genotypic characterization of lytic phages against Klebsiella pneumoniae resistant to carbapenems Nolivos,K.V., Cabezas-Mera,F.S., Tisalema,E.E., Reyes,J.A., Fierro,I.M. and Pazmino,L.A. 2023-06-01 — GenBank