Protein

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Genbank accession
AUR93201.1 [GenBank]
Protein name
FCCH domain ubiquitin-activating enzyme E1
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPQITQRSFTSGEIAPALQSRADMTKYATGLHLCENFLVRAQGGVYSRPGFRFVGELDNSARVGRLIPFSFNTEQTYILVFEHLKVRVIKDGGFVLDGGGPAIFELATPYTESQLPRLGFTQNADVMTIVHPDHDPRNLNRMADDDWSLTTIDYAPTVDSPTFSSGSVDKAITGISQSNPAVVTAVAHGFVTGNLISINGVAGMTQVNGRSFIITALTTDTFELNGEDSTGHDPYTSGGTASRQNGATTIGEGFGDFDKTYTYVVTAVDAEGSESLASAEVSITTGSLATTAGVRLTWDTVPEAEYYRVYKDPSVGTGIYGWIGDSNNNSFDDYNIAPITSDAPPSDRQPFNGEGNKPSTVTYYQQRQVFANTYNEPQATFTTQTNNFDSLRVSNPARDDDAVTFTIAARQVNEIRHLLPLDSLILLTSGGEWIMTEGQDRVLTPATVGVRIQSYNGCSIIPPVVINSTALYLQEKGTRLRDLGYEFSSDKYTGNDLSLMSEHLFEGHTIVSMAYADEPYSIVWCVRDDGVLLGLTYQREHQVWGWHKHTTQGEFEYVATVTEGSRDAVYAIVKRTINGSVVRYVERLEPRESINAEDCFYLDSGLTYDGAPATVISGLDHLNGETVSILTDGYTVPDQVVSEGQITLQRAASKVHVGLSYLPAIETLDIDTPSPSQTLKAQSVSVSKVTIEVDGSRGGWVGPRQDNGSPAPMSEIKPRFDSDNYDPIALKTYKSEVFIQPQWGKGGGVRIEQRAPLPMSILSIIPQIDIGGN
Physico‐chemical
properties
protein length:773 AA
molecular weight: 84192,50690 Da
isoelectric point:4,71112
aromaticity:0,08926
hydropathy:-0,27917

Domains

Domains [InterPro]
DC_0058
STR
1–768
DC_0058
IPR042302
STR
168–243
IPR042302
IPR032418
RBD
179–242
IPR032418
AUR93201.1
1 773
Architecture
STR
STR 1-768 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR93201.1
1 773
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,9940
Central domain 157 359 204 0,1441
C-terminal 360 773 413 0,0745
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-359
C-terminal
360-773

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.185.O._10N.286.49.C2
[NCBI] 		1881392 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR93201.1 [NCBI]
Genbank nucleotide accession
MG592551 [NCBI]
CDS location
range 9490 -> 11811
strand +
CDS
ATGCCGCAAATCACACAACGCAGCTTTACATCCGGTGAAATTGCACCAGCATTACAATCTCGTGCTGACATGACAAAGTACGCCACAGGTTTGCATCTTTGTGAGAACTTCCTGGTGCGTGCACAAGGTGGTGTTTACTCACGCCCTGGGTTCAGGTTCGTCGGTGAGCTTGATAATTCTGCTCGTGTGGGTCGCCTTATCCCGTTCAGCTTCAACACTGAACAGACTTACATACTCGTGTTTGAGCACTTGAAAGTCCGTGTGATTAAAGACGGTGGGTTCGTGCTTGACGGTGGTGGACCTGCAATCTTTGAACTTGCTACACCTTACACTGAATCACAATTACCACGTTTAGGGTTCACACAGAACGCTGATGTGATGACAATCGTTCACCCTGACCATGATCCTCGTAATCTAAACCGCATGGCTGATGATGATTGGTCATTGACGACAATTGATTATGCACCGACTGTTGACAGCCCAACGTTCAGCAGTGGGTCAGTGGATAAAGCAATCACAGGTATTTCTCAATCGAACCCTGCTGTGGTAACTGCTGTGGCTCATGGGTTCGTCACTGGTAACCTGATCAGCATCAACGGTGTAGCAGGTATGACACAGGTGAATGGTCGGTCATTCATCATCACAGCGTTGACCACTGACACCTTTGAGTTGAACGGTGAAGACTCCACAGGTCACGACCCGTACACGTCTGGTGGTACAGCTAGTCGTCAGAATGGTGCAACAACCATTGGTGAAGGGTTTGGTGACTTCGACAAGACTTACACATACGTTGTGACTGCTGTTGATGCTGAAGGTTCTGAATCATTGGCATCTGCTGAAGTGAGTATCACAACAGGTTCACTGGCAACGACTGCCGGTGTACGTTTGACCTGGGACACTGTACCTGAAGCAGAGTATTACCGTGTCTACAAAGACCCGTCAGTGGGTACAGGTATCTACGGTTGGATCGGTGACTCGAATAACAATTCATTCGATGACTACAACATTGCACCGATTACTAGTGATGCACCACCAAGCGACAGACAACCGTTCAACGGTGAAGGTAACAAACCGTCAACTGTGACGTACTACCAACAGCGTCAAGTGTTCGCTAACACATACAATGAACCACAAGCGACATTCACCACTCAGACAAACAACTTCGATTCACTGCGAGTGTCTAACCCTGCTCGTGATGATGATGCTGTGACGTTCACCATTGCTGCACGACAGGTCAATGAAATTCGTCACCTGCTACCGCTTGATTCGCTTATTCTGCTGACATCCGGTGGTGAGTGGATCATGACTGAAGGTCAAGACAGAGTTCTGACACCTGCAACAGTGGGTGTGCGTATCCAGTCATACAACGGTTGTTCAATCATCCCACCGGTTGTGATCAACAGTACAGCGTTATACCTGCAAGAGAAAGGTACACGACTGCGTGACCTGGGTTATGAGTTCAGCAGTGACAAGTACACAGGTAACGATTTATCACTGATGTCAGAACACCTGTTTGAAGGTCACACGATTGTATCAATGGCGTATGCAGATGAACCATACAGCATTGTGTGGTGTGTCCGTGATGACGGTGTACTGTTGGGTTTAACTTATCAGCGTGAACATCAGGTGTGGGGTTGGCACAAGCACACGACACAGGGTGAATTTGAATACGTCGCAACAGTCACTGAGGGAAGTCGTGACGCTGTGTATGCTATCGTGAAGCGCACAATCAATGGTTCAGTAGTTCGATATGTTGAGCGACTTGAACCACGTGAGTCAATCAATGCTGAAGACTGTTTCTATCTCGATTCTGGTCTGACGTATGACGGTGCACCTGCAACCGTGATCAGTGGTCTTGACCATTTGAACGGTGAGACTGTGAGCATCTTGACTGACGGTTACACTGTACCTGATCAGGTTGTATCTGAAGGTCAAATCACACTGCAACGTGCAGCATCAAAGGTTCATGTGGGTCTGAGCTACTTACCTGCAATTGAAACATTGGACATTGACACACCGTCACCAAGTCAGACATTGAAAGCACAATCAGTCTCGGTGTCGAAAGTCACTATTGAGGTTGATGGTTCTCGTGGCGGTTGGGTAGGTCCACGTCAAGACAATGGTTCACCTGCACCGATGAGTGAGATTAAACCTCGTTTCGACAGTGACAACTATGACCCGATTGCATTGAAGACTTACAAATCAGAAGTGTTCATTCAACCGCAATGGGGCAAAGGTGGTGGGGTTCGCATTGAACAGCGTGCACCGTTACCAATGTCTATACTTTCAATAATTCCACAAATCGACATAGGCGGTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
60db1635fe1a897bf3a326741f9221e7184040ce06a3133d5a7e30be859de02a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9163
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank