Protein

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Genbank accession
YP_009791500.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MAIDYKQRYPDQVATDANYPQGKARNKSTPAAIDGTPFEEDYINDQWGFFQALLKEGGLTPSGNADNANNSQYLEAIRGIVKEPLTLKIFQSPTDNLTKVTTFAGGAGVAYEVRKTSDNSLATIYSDKDGANEILQNGTSNVSDSSGVVAFYIADGDYYVEVDSIQISFEVDVLRQELAATDSNTQVGGEAAGDIANNMIAPVLRGKSITPPIMTGLIPSRKSALLKISDEQYRSYLHLGGRTWQVSDFANSGLDAAGNTTPFGWNQTMIQDFAESIIWGDAEVTTGSGTWTDLSSSDPNPYLGHRAAQTTTVGAFVEVSLQVGSGEADITLNFTGRNNGNIIDVTIDGSTALVNEATTVDTYTPIDLTHRQTKLVASGLPARVSPYLVRFTLSAAKNQSSLAGDRFIFSGLTIEGDSFGNPWSPSVRPKVWMPTTAYAQYEEVIGGGGRIYVCTVAGTSGTEIPSHTSGSATDGNVTWLLIKRSAFVTDSNRSDTLQAAGSQLEYAYEFRPTLSDPYQDVGGNLHGNEYLTSALTISADGLTKSLENGSYAVGYQLILNQKIRAYYGIVTATSTDICDTSLTHSIGNGKIVVSHESKMLSDGNFGYHYPAMWPVVHFNGVTAKLVCPQMELAQTGRVDLIDYAGIVNPFVGASTDLQMRAIGDIYRPIGAGGVPSTDDGEYHCIMSLTASNYGVGDYEYGSRLASIAPNLSGAVTPSGFSSWVGKMYFARSNTDKPEPVTIGQVIRADNEYKVSLFRK
Physico‐chemical
properties
protein length:759 AA
molecular weight: 81438,41440 Da
isoelectric point:4,75495
aromaticity:0,09223
hydropathy:-0,23412

Domains

Domains [InterPro]
DC_0934
STR
1–503
DC_0934
YP_009791500.1
1 759
Architecture
STR
STR 1-503 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009791500.1
1 759
Domain Start End Length (AA) Confidence
N-terminal 1 497 497 0,4281
Central domain 498 696 200 0,6568
C-terminal 697 759 62 0,9817
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-497
Central
498-696
C-terminal
697-759

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage J2-1
[NCBI] 		2023998 Uroviricota > Caudoviricetes > Qingdaovirus >
Host Pseudoalteromonas sp.
[NCBI] 		53249 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009791500.1 [NCBI]
Genbank nucleotide accession
NC_047839 [NCBI]
CDS location
range 89770 -> 92049
strand -
CDS
ATGGCAATAGATTATAAACAAAGGTATCCCGATCAAGTCGCAACGGATGCCAACTACCCGCAAGGTAAAGCCCGTAACAAAAGTACCCCTGCCGCAATAGATGGTACACCATTTGAAGAAGACTACATTAATGATCAATGGGGTTTCTTCCAAGCGTTATTGAAGGAAGGGGGTCTAACTCCTTCTGGAAATGCTGATAATGCTAATAACAGTCAATACTTAGAGGCTATTCGTGGTATTGTTAAAGAGCCTCTTACACTAAAAATATTCCAATCGCCTACCGACAACCTAACCAAAGTTACAACGTTTGCAGGTGGCGCAGGGGTTGCTTATGAAGTACGTAAAACGTCTGATAATTCTCTAGCTACTATTTACAGTGATAAAGATGGTGCAAATGAGATTTTGCAGAATGGTACGAGTAATGTATCTGATAGCTCTGGAGTTGTTGCTTTTTATATTGCTGATGGTGATTATTATGTTGAGGTTGATTCTATTCAGATTAGTTTTGAGGTTGATGTGCTGCGGCAGGAGCTAGCCGCCACAGATAGCAATACTCAAGTTGGTGGAGAAGCAGCGGGAGACATCGCTAACAACATGATAGCACCAGTACTGCGCGGTAAGTCAATAACTCCCCCAATTATGACTGGGCTAATACCATCTAGAAAATCGGCATTACTGAAAATCTCAGATGAGCAATACCGCAGCTACTTACACTTGGGCGGAAGAACTTGGCAAGTAAGTGATTTTGCAAACAGTGGACTAGACGCAGCTGGGAACACTACACCGTTTGGCTGGAATCAGACAATGATTCAGGACTTTGCGGAGTCTATAATTTGGGGTGATGCAGAAGTCACGACTGGTTCTGGTACATGGACAGACCTTAGCTCTAGCGACCCAAATCCATATTTAGGACATCGTGCTGCACAAACTACTACTGTTGGTGCGTTCGTGGAGGTAAGCTTGCAAGTTGGCTCTGGTGAGGCCGATATAACGTTGAATTTCACGGGTCGAAACAACGGGAATATTATTGACGTGACCATCGACGGATCAACAGCATTAGTTAATGAGGCGACCACAGTTGACACATACACGCCCATTGATTTAACGCATCGACAGACAAAACTGGTCGCGTCTGGTTTACCCGCTAGAGTTTCACCGTACTTAGTTAGATTCACACTGTCAGCAGCTAAGAACCAGTCAAGTTTGGCTGGGGATAGATTTATATTTTCAGGATTAACAATTGAGGGGGATTCGTTCGGAAACCCGTGGAGTCCCAGTGTAAGGCCTAAAGTTTGGATGCCGACTACAGCTTATGCTCAGTACGAGGAAGTGATAGGTGGTGGTGGTCGCATTTATGTTTGTACAGTTGCTGGGACGTCTGGTACGGAAATACCAAGCCATACGAGCGGTAGCGCAACAGATGGGAATGTGACTTGGTTACTTATAAAGCGCTCAGCATTTGTTACCGACTCAAACAGATCTGATACGCTACAGGCTGCTGGTAGTCAGCTTGAGTACGCATACGAGTTTAGACCGACACTAAGCGATCCGTATCAAGATGTAGGAGGAAATCTCCACGGTAATGAATACTTAACATCTGCTTTGACTATCTCAGCGGACGGTCTTACAAAATCTTTGGAAAATGGAAGTTACGCAGTAGGTTATCAATTAATTTTGAATCAGAAGATCCGAGCGTACTATGGCATTGTTACTGCTACGTCAACGGACATTTGTGATACATCACTGACTCATAGCATCGGGAATGGTAAAATTGTTGTAAGCCACGAAAGCAAAATGCTATCCGATGGCAACTTCGGATATCACTATCCTGCTATGTGGCCTGTAGTCCACTTTAACGGTGTTACAGCTAAGTTAGTATGTCCGCAAATGGAGTTGGCACAAACTGGTCGAGTTGATTTAATAGATTACGCTGGGATAGTTAACCCGTTTGTAGGAGCGAGTACCGACTTACAAATGCGAGCAATAGGTGATATTTACCGACCTATCGGTGCGGGAGGAGTCCCATCAACAGACGATGGTGAGTATCACTGCATTATGTCACTAACAGCATCTAATTACGGTGTTGGTGATTATGAATACGGGTCAAGATTAGCTAGTATTGCCCCTAACCTGTCAGGAGCAGTGACACCAAGTGGTTTTAGTAGTTGGGTAGGAAAAATGTACTTTGCTAGAAGTAACACAGATAAACCTGAACCTGTAACTATCGGGCAGGTCATACGCGCAGACAATGAGTATAAAGTGTCGCTATTTAGAAAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
69d33b265fb36aae307091911d7ab198941b9103c5d7d263a99bcfcf6041e0ee
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6020
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Novel Lytic Pseudoalteromonas phage Isolated from Qingdao coast of China Li,H. 2018-06 — GenBank