Protein

View in Explore
Genbank accession
XDJ00551.1 [GenBank]
Protein name
tail fiber
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence GenBank
Probability 1,00
Protein sequence
MYYSLMRESKVIVEYDGRAYHFDALSNYDINTSYEEFKTLRRTIHRRTNYADSIINAQTPSSISLAINFSNTLTEANFFEWMGFDREGNTFLLPLYSTNIEPTMFNIYIVNKDNNCVYFENCYVSTVDFSLDKSVPILNVGIESGKFSEVSTFTPAGSIVQGEVMSYSPPRVSTNSNVLPALLSASMSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATIAFYYTKRFAGDMFYNIEPETDIPLTIRNEHISIDFPSARITKRLQFSDIYRVEWDVIPTADSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:299 AA
molecular weight: 34502,34220 Da
isoelectric point:4,97798
aromaticity:0,14047
hydropathy:-0,30870

Domains

Domains [InterPro]
IPR056389
1–298
IPR056389
XDJ00551.1
1 299
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PMBT26
[NCBI] 		3229745 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ00551.1 [NCBI]
Genbank nucleotide accession
PP926508.1 [NCBI]
CDS location
range 8864 -> 9763
strand +
CDS
ATGTACTACTCTCTAATGCGAGAGTCAAAAGTTATAGTTGAGTACGATGGCAGGGCTTATCATTTTGATGCCCTGTCAAATTACGATATCAATACGTCCTATGAGGAATTTAAAACTCTTCGTAGGACTATCCATCGTAGAACCAACTATGCTGACTCTATTATTAATGCACAAACTCCATCTTCAATATCGCTGGCTATAAATTTTAGTAATACCCTTACTGAGGCTAACTTCTTTGAATGGATGGGCTTTGATAGAGAGGGTAACACATTCTTACTACCACTTTATAGTACAAATATTGAGCCAACAATGTTTAATATATACATAGTTAATAAAGATAATAACTGTGTGTACTTTGAGAATTGCTATGTATCTACTGTAGACTTTTCTCTAGACAAAAGCGTTCCTATCCTAAACGTAGGAATTGAATCTGGTAAGTTCTCTGAGGTGTCTACTTTTACTCCTGCTGGTTCTATTGTTCAGGGTGAAGTTATGTCATATAGTCCTCCTAGAGTATCTACCAACAGTAATGTTTTACCAGCTCTTTTATCCGCTTCTATGTCATTCCAGCAACAATGTTCTTGGAGAGAAGATAAAAGCGTATTTGACATAAACAAAATATATAATAATAAGAGAGCTTATGTTAATGAAATGAATGCTTCGGCAACAATTGCATTTTACTACACTAAGCGATTTGCTGGTGATATGTTTTATAATATTGAACCCGAAACTGACATACCATTAACCATCCGAAATGAACATATTTCGATTGACTTTCCTTCAGCACGTATAACAAAACGCCTACAATTCTCGGATATATACAGAGTTGAATGGGATGTAATCCCTACTGCAGACTCTGATCCGGTAAGAATCGACTTCTTTGGAGAAATAAAGAAATGA

Tertiary structure

PDB ID
d0fac0fff1a927392649b84552f9e360b7d743c9f701eb34622288584f798edf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8390
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S., Brinks,E. and Hille,F. 2020-12-18 — GenBank