Protein

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Genbank accession
WVW37939.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MRTLVARQGDVIRIGGGTQRIFPAGTRLVMEGSSRFESLVTLGSSSSDLFYFTAGCITEGLEFNCLDGSAFRRLIGYVTNNRVYDQLVTAETQINNQGASPLLDFCVRYFGQDQKVFGSKIVNVDKGHFVYGDGGDGDPMIGARLYGLEAESYVTGIDLRNLRDAKCIGASTKTRSSNATQDPGHNAIVHEGVFEYELLDFSFKDAGEHGARFGGTRNSEQSSGLITVGNGSIYRSGQCGLKFFTGTAGQVFERVNVGNVNVVDCQYEPENPSELPGFNDEGFLFQQMRGLAGHGLSVSKQSSTTGYSCDCGIFITTSEDINLDGAHIDDPYRNAIRIAEFDDGAGSAPVETTSNNGISIKNVRANAVREHGIFIDHPTQSIRDLTIEADLIGSGTGSFYAISGNGAAARYAQPCLFELKQRAFTSGISGLPGTANIKTRDRFGSTY
Physico‐chemical
properties
protein length:447 AA
molecular weight: 48082,73910 Da
isoelectric point:5,21460
aromaticity:0,09396
hydropathy:-0,27092

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVW37939.1
1 447
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,8937
Central domain 11 436 427 0,9637
C-terminal 437 447 10 0,6509
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-436
C-terminal
437-447

Taxonomy

  Name Taxonomy ID Lineage
Phage Labrenzia phage vB_LagS-V1
[NCBI] 		3113644 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Roseibium aggregatum
[NCBI] 		187304 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVW37939.1 [NCBI]
Genbank nucleotide accession
PP058680.1 [NCBI]
CDS location
range 15417 -> 16760
strand +
CDS
GTGCGCACACTGGTTGCCCGTCAGGGTGACGTGATCCGGATCGGTGGCGGAACCCAGCGGATTTTTCCTGCCGGCACTCGGCTGGTCATGGAAGGCAGCAGCCGGTTCGAAAGTCTCGTAACTCTTGGGTCCAGTTCGAGCGATCTTTTCTACTTCACTGCCGGCTGTATCACGGAAGGCCTCGAGTTCAATTGCCTGGATGGGTCTGCTTTCCGGCGTCTCATCGGGTACGTCACGAACAACCGGGTCTACGACCAGCTTGTGACGGCAGAAACGCAGATCAACAATCAGGGTGCATCGCCACTGTTGGACTTTTGCGTCCGTTACTTCGGGCAGGATCAGAAGGTTTTCGGGTCTAAGATTGTCAACGTGGACAAGGGACATTTCGTCTACGGCGATGGCGGTGATGGCGATCCGATGATCGGTGCCAGGCTTTATGGCCTGGAGGCGGAAAGCTATGTTACAGGCATTGATCTGCGAAACCTTAGAGATGCCAAGTGCATCGGTGCTTCAACAAAGACACGTTCCTCAAACGCTACACAAGACCCCGGCCACAACGCTATCGTTCATGAAGGGGTCTTCGAATACGAGCTTCTCGACTTCTCCTTCAAAGACGCAGGAGAACACGGTGCGCGTTTTGGTGGCACAAGAAACAGCGAGCAGTCTTCAGGTCTCATCACTGTTGGCAATGGGTCGATTTATCGGTCTGGCCAATGCGGACTGAAGTTCTTCACCGGTACAGCGGGGCAGGTTTTTGAAAGGGTCAACGTTGGCAACGTGAACGTCGTTGATTGCCAGTATGAGCCTGAAAATCCCTCCGAGCTTCCTGGCTTCAATGATGAAGGGTTTCTCTTCCAGCAGATGCGTGGTCTGGCCGGTCACGGTCTCAGCGTGTCCAAGCAGTCCAGCACGACAGGCTATTCTTGCGATTGCGGGATTTTTATCACCACGTCAGAAGATATCAATCTCGATGGTGCTCACATTGATGACCCCTATCGGAACGCAATCAGAATTGCGGAATTTGACGATGGTGCTGGGTCTGCGCCGGTGGAGACAACGTCAAACAACGGTATCTCGATCAAGAACGTAAGAGCCAATGCTGTGCGAGAACATGGCATTTTTATTGATCATCCGACCCAGTCCATTCGGGACCTGACAATCGAGGCAGATCTCATCGGTTCGGGGACCGGTAGCTTTTATGCCATTTCTGGTAATGGTGCCGCTGCCCGGTATGCGCAGCCGTGTCTTTTTGAGCTGAAACAGCGTGCTTTCACGTCAGGGATTAGCGGCTTGCCTGGAACGGCAAATATCAAAACCCGTGACAGGTTCGGCTCAACCTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
deb0c660f975b2b3bdb9dc760784e5bb97f5499d520f4b2c41270c54d661145d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8249
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50