Protein

View in Explore
Genbank accession
QBP05601.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRVLFTKDDQGNIIDLGFAKGGSIDGNVIHIGNYNQTGDYTLNGTFTQTGNFNLTGIARVTRDIIAAGQIMTEGGELITKSSGTAHVRFFDGNSRERGIIFSPNNAGATTQVVNIRVQDYAADSESIYAFSGNGVFSSPEVSARKSISSPQILTDKVITDGKKTGDYDISSLSNNTPLAESETAINHLRVMRNAVGAGIFHEVNVNDGITWYSGDGLDTYLWSFNWAGGLKAGHSISVGLPGGPKGYSELGTASIALGDNDTGLKWYQDGYFYVVNNGTRTFLYSPESTVSLRKMVMGYSVNGNDLTTPPTENYALATVVTYHDNNAYGDGQTLLGYYQGGNYHHYFRGKGTTNINTHGGLLVTPGNIDVIGGSVNIDGRNNASTLMFRGNTTGSSSVDNMTINVWGNTFSTVDGFRKNVMEISDAIGWMHYIQRNKDNTIEAVLNGQQTINENLVVKKDILVDRAVHTAGEITTSAVNGLRIWNNDYGAIFRRSEGSLHIIPTAFGEGMSGDIGPLRPFSLALDTGKVTIPDLQSSYNTFAANGYIKFVGHGAGAGGYDIQYAQAAPIFQEIDDDAISKYYPIVKQKFLNGKSVWSLGTEINSGTFVLHHIKEDGSQGHTSRFNQDGTVNFPDNVLVGGGEAAIARNGNIFSDIWKTFTSAGDITNIRDAIATRVAKEGDTMTGTLWINKDAAGIVLNPPLSSDSSFIRSDTAGANNWYIGKGGADNGLGFYSYITQGGVYITNTGEISLSPQGQGTFNFNRDRLYINASQWVAHKSGAWGDQWGLEAPIFVDFGGVGNDSYYPIIKGKSGITNEGYISGVDFGMRRITNTWAQAIIRVGNQESESNPQAIYEFHSNGTFYAPSLLKSNRVSAGGGDPAWGSPCIVLGDNDTGFLWEADGIFNAYANGQGVFSFRAGLAQTFGNVNFHCNAGMYVRDNIDVNDVYIRSDIRCKSEIKLIKNAQEKSKLLGGYTYLLKNPVTDEVKPSAGLIAQEVQEILPELVSEDKETGLLRLNYNGIIGLNTATINEHTDEIKELKSEIAELKALIKSLIK
Physico‐chemical
properties
protein length:1088 AA
molecular weight: 117481,24630 Da
isoelectric point:5,44781
aromaticity:0,09743
hydropathy:-0,27776

Domains

Domains [InterPro]
DC_0538
STR
1–707
DC_0538 G3DSA:6.20.80.10 IPR030392
DC_0339
STR
621–1041
DC_0339 Coil
IPR030392
CHP
983–1038
IPR030392
DC_0218
STR
1023–1088
DC_0218
QBP05601.1
1 1088
Architecture
STR
STR 1-1088
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBP05601.1
1 1088
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,3909
Central domain 151 349 200 0,6197
C-terminal 350 1088 738 0,6658
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-150
Central
151-349
C-terminal
350-1088

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PHB12
[NCBI] 		2530037 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP05601.1 [NCBI]
Genbank nucleotide accession
MK524178.1 [NCBI]
CDS location
range 48597 -> 51863
strand +
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGAGCACGTCCTGCCGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAATTTAAAAGACCGCGTACTTTTTACTAAAGATGACCAAGGAAATATCATTGATCTGGGTTTTGCTAAAGGCGGTAGCATTGACGGGAATGTTATTCATATAGGAAATTATAATCAAACTGGTGATTATACTTTAAATGGCACTTTCACTCAGACAGGTAATTTTAATTTAACTGGTATTGCTCGAGTAACTCGTGATATTATTGCCGCCGGGCAGATTATGACTGAAGGCGGTGAACTTATTACAAAAAGTTCAGGTACAGCACATGTTCGTTTTTTCGATGGCAATAGCCGCGAACGTGGCATTATCTTTTCGCCAAATAATGCTGGAGCGACCACTCAGGTAGTTAATATTCGCGTACAAGATTATGCCGCTGATAGCGAAAGCATTTATGCGTTTTCAGGCAACGGTGTATTTTCTTCACCTGAAGTATCGGCACGGAAATCTATTTCGTCTCCACAAATTCTGACCGATAAAGTTATTACAGATGGGAAGAAGACGGGCGATTATGATATATCTTCATTATCAAATAACACTCCATTGGCAGAAAGCGAAACGGCTATTAACCACCTCCGTGTTATGCGAAATGCTGTAGGAGCAGGTATTTTCCACGAAGTTAATGTTAATGACGGAATAACCTGGTATTCCGGAGATGGACTTGACACTTATCTTTGGTCGTTTAACTGGGCCGGTGGATTGAAAGCCGGTCATTCTATTTCTGTAGGTCTTCCAGGCGGCCCTAAAGGATATTCTGAGTTAGGAACGGCCTCAATTGCTCTTGGTGATAATGATACCGGATTAAAATGGTATCAAGATGGTTATTTCTATGTAGTAAACAATGGTACGAGAACTTTCCTTTATAGTCCTGAATCAACCGTAAGCCTTAGAAAAATGGTTATGGGTTATTCTGTAAATGGCAATGATTTGACTACTCCTCCGACTGAAAACTATGCTTTGGCTACTGTTGTTACTTACCATGATAATAATGCGTATGGTGACGGTCAGACTCTTTTAGGATATTACCAAGGCGGTAATTATCATCACTATTTCCGTGGTAAAGGTACTACAAATATTAATACTCACGGCGGTTTATTAGTCACTCCTGGTAATATTGACGTTATTGGTGGTTCTGTTAATATTGATGGTCGTAATAATGCTTCTACGCTGATGTTTAGAGGTAACACAACTGGTAGCAGTTCAGTTGATAATATGACTATCAACGTTTGGGGTAACACCTTTAGTACAGTAGATGGTTTTCGTAAAAACGTGATGGAAATATCTGATGCTATTGGTTGGATGCATTATATTCAGCGCAATAAAGATAATACCATTGAGGCTGTATTAAATGGACAACAAACTATTAACGAAAATCTTGTTGTTAAAAAAGATATTTTGGTTGATAGAGCGGTCCATACCGCAGGCGAAATTACTACAAGTGCTGTTAACGGGCTCCGCATCTGGAACAACGATTATGGCGCCATTTTTAGACGTTCGGAAGGAAGTCTTCATATTATTCCTACTGCATTCGGTGAAGGCATGTCCGGTGATATTGGCCCACTTCGCCCGTTTAGTTTGGCTTTAGATACTGGTAAAGTTACTATTCCAGATTTACAATCAAGTTACAATACGTTTGCTGCTAACGGTTATATTAAATTTGTTGGTCATGGAGCGGGTGCCGGTGGATATGATATTCAATATGCCCAAGCGGCTCCTATTTTCCAGGAAATTGATGATGATGCTATAAGCAAATATTATCCTATTGTTAAACAGAAGTTTTTAAACGGTAAATCCGTTTGGTCTTTAGGTACTGAAATTAATTCGGGTACATTTGTTTTACACCATATCAAAGAAGATGGATCACAAGGACATACATCTCGTTTTAATCAAGACGGTACTGTTAACTTCCCGGATAACGTTCTGGTCGGCGGTGGCGAAGCTGCTATTGCTCGTAATGGTAATATTTTCTCGGATATCTGGAAAACGTTTACTTCAGCAGGAGACATTACAAATATTCGCGATGCAATAGCTACTCGTGTTGCTAAAGAAGGCGATACGATGACCGGCACTCTTTGGATTAATAAAGATGCTGCTGGAATAGTTCTTAATCCTCCTTTGTCTAGTGATTCATCATTTATTCGTTCTGATACGGCCGGGGCCAATAATTGGTATATTGGTAAAGGCGGTGCCGACAATGGTCTAGGTTTTTACAGTTACATTACACAAGGCGGTGTATACATAACAAATACCGGTGAAATATCGCTTTCTCCTCAAGGACAAGGAACATTTAATTTTAATAGAGACCGCCTTTATATAAATGCTAGTCAATGGGTTGCACATAAATCTGGCGCTTGGGGCGACCAATGGGGCTTAGAAGCTCCTATATTTGTGGATTTTGGTGGTGTCGGTAATGATAGTTATTATCCGATTATCAAAGGAAAATCTGGTATTACCAATGAAGGATATATATCGGGTGTAGATTTCGGTATGCGTCGTATTACTAATACATGGGCCCAAGCTATTATCCGTGTTGGTAACCAGGAAAGCGAGTCGAACCCGCAAGCTATCTATGAATTCCACTCTAATGGCACTTTTTATGCTCCGAGCTTACTTAAGAGTAACAGAGTATCGGCTGGTGGTGGTGACCCAGCATGGGGCAGTCCTTGTATTGTATTAGGTGACAATGATACCGGATTTCTTTGGGAAGCAGATGGTATTTTCAACGCATATGCAAACGGCCAAGGCGTATTCAGTTTTAGAGCTGGTCTCGCACAAACGTTCGGTAACGTTAACTTCCACTGTAACGCCGGTATGTATGTTCGTGATAACATTGATGTTAACGATGTTTATATCCGTTCTGATATTCGTTGTAAGTCAGAAATTAAGCTTATTAAGAACGCTCAAGAGAAATCTAAACTCTTAGGCGGCTATACTTATCTGCTTAAAAACCCTGTTACAGACGAAGTTAAACCGTCTGCAGGTTTAATTGCTCAGGAAGTTCAAGAAATATTGCCTGAACTTGTTTCTGAAGATAAAGAGACCGGCTTACTTCGTTTAAACTATAACGGTATTATCGGTTTAAATACTGCTACTATCAACGAGCATACTGACGAAATCAAGGAATTGAAATCTGAAATTGCTGAATTGAAAGCATTAATTAAATCATTGATAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cc70f552e2d9defdd135291c18164a26001774b2a3f86bac2f419f66195217d5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5433
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identifican and characterization of a broad host-range O157 phage against Escherichia coli O157 Chen,Y., Yang,L., Song,J., Qian,P. and Li,X. 2023-09 — GenBank