Protein

View in Explore
Genbank accession
XOA00280.1 [GenBank]
Protein name
long-tail fiber proximal subunit protein
RBP type
TF
Evidence RBPdetect
Probability 0,64
TF
Evidence RBPdetect2
Probability 0,66
Protein sequence
MADQFKPAFRATSGLDAAGEKVVNVAKADFGTLTDGVNVDFFIEENTLQQYDSTRGYRQNFAVIYDNRVWVSNQDIPAPAGAFAELRWKAVRTDPKWVEIKQPVYQLKSGDYVTVNSEQSPCNMSLPSSPQDGDTIVIKDIGNNAGYNEMKVRATNQSIVRFGQQVTETLLTKPLSYNILIFSNRLWNFYQTAQEERGIRVEPLVEFKAQAGDSIFRRYTSANPVTILLPKYANQGDIIKSVDIDGLGPMYHLIIKSSDPTIGIDSPGVLQKEYRTSGDGLLTYVAADRVWKTWDGDIRTRLRIVRDNVKLMPNESITVFGDNNMVSQTINIELPTDVSIGDTIKIALNYLRKQQTVILKTTGGDKIATDIKLLQFPKRSEYPPDATWVTVSQLEFNGDINYTPVIEFSYTEEAGAGVWIVQQNVPTVERVDSKDNNTRKRLGVISLASQTEANVDFENAPIKESAITPETLANRVATESRRGIARIATTAQVNQDTTFAFQDDLIISPKKLNERTATETRRGLAEIATQTETNQGTDDSTIITPLKLTARKASETLTGIAKLVSTVGTAPGVDRPTLGTNVYNSANNIDIVTPMSLSQLKGTYTEQGLWIGAIESEVIAGVMNNGFPNGVVTPEMLHKKTSTDSRIGLIQIAKQTEVDAGTDYTKAVTPKTLNDRKASETLTGIAEIATQAELDGGTDDVRISTPLKIKTHFADTTRREVTAASGLEVTGTVWDKISFNIKPSAEAQRGTSRLATQGEVDTGTDDATIVTPLKLQRKKATEGTEGIIQVATQAEVIAGTNGLKAVPPVHLKYIAQTEKTWEATAARRGFVKLTENTLTFKGDAVNGSGRLLPDGSANLPALDGLMKDGFAVSPYEMNRALQYFLPANAKAVDTDKLDGLDSLQFIRRDVDQSVEGKLTLTKETILTAPLTSSTYASFAGTLSAKDIATEGPIIILNGTNRWNIRALNNATTLTFGNTANVLTINSATGNVAAQNNLSAGAEVSATTKYNLNSRTVIETTAGTPNATLAVGDNAQNLVLKTLDAGNIVANGGGAYKVLTEKNAKEIVDRDFVKKEGDTMGGKLNINAPVLPKITEAQALAPLNTNNFGFWTADITTPTEYQKLPGYAVPVMEIIDGSSTGHVDHYDYVKAPGVMTGTGTSLTSMTRTWTPRPQSIQDNHNANTIWISVWDLARNKWGEWGRVYTNQAPPTAAEIGAVSSSGSAFNNLTIRDWLQVGQVRIEPDPDTRSVKFTWVDIP
Physico‐chemical
properties
protein length:1257 AA
molecular weight: 136711,01660 Da
isoelectric point:5,37352
aromaticity:0,06762
hydropathy:-0,32355

Domains

Domains [InterPro]
IPR048391
1106–1203
IPR048391
XOA00280.1
1 1257
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KM5a1-KLB31
[NCBI] 		3145205 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOA00280.1 [NCBI]
Genbank nucleotide accession
PP582757 [NCBI]
CDS location
range 156272 -> 160045
strand +
CDS
ATGGCCGATCAATTTAAACCTGCATTCCGTGCCACGTCTGGTCTCGATGCAGCAGGCGAAAAGGTTGTCAACGTTGCCAAAGCCGACTTCGGTACATTAACTGACGGTGTTAACGTTGACTTTTTCATCGAAGAAAACACTCTTCAACAGTATGATTCGACTCGTGGTTATCGCCAGAACTTCGCAGTTATCTATGATAACCGTGTTTGGGTCTCTAACCAGGATATCCCTGCACCTGCTGGCGCATTCGCAGAACTTCGTTGGAAAGCAGTTCGTACCGATCCAAAATGGGTCGAAATCAAACAACCTGTTTACCAACTCAAATCAGGTGATTATGTAACTGTTAACTCAGAACAATCACCGTGCAATATGTCTTTACCATCGTCTCCACAGGATGGCGATACCATCGTTATTAAAGATATCGGTAATAATGCCGGTTATAACGAAATGAAAGTACGTGCGACTAACCAATCAATTGTTCGTTTTGGTCAGCAAGTAACTGAAACTCTTTTAACCAAGCCACTGAGCTATAATATTCTTATTTTTAGTAATCGTCTGTGGAACTTCTACCAGACTGCTCAGGAAGAACGTGGTATTCGTGTAGAACCTTTAGTAGAATTCAAGGCTCAAGCCGGTGATTCAATTTTCCGTCGTTATACTTCGGCAAACCCGGTTACTATTCTTCTGCCAAAATACGCTAACCAAGGCGACATCATTAAGTCTGTTGATATTGACGGCTTAGGTCCGATGTACCACCTGATTATTAAATCAAGTGACCCAACCATTGGTATCGATTCTCCTGGTGTTTTACAGAAAGAATATCGTACGAGTGGTGATGGCCTGCTTACTTATGTTGCAGCCGATCGTGTCTGGAAAACTTGGGACGGTGATATTCGTACACGTCTTCGTATTGTTCGTGATAACGTTAAGCTTATGCCTAATGAAAGTATCACGGTATTCGGCGACAACAATATGGTTTCTCAGACAATCAATATTGAACTGCCTACTGATGTTTCTATCGGTGACACAATCAAGATTGCTCTGAACTATCTTCGTAAACAACAGACTGTTATTCTTAAAACGACTGGTGGTGATAAGATTGCGACTGATATTAAGTTGCTTCAATTCCCTAAACGTTCTGAATATCCGCCTGATGCTACTTGGGTCACTGTGTCTCAGTTAGAATTTAATGGTGATATTAACTACACCCCGGTAATTGAGTTTAGTTATACGGAAGAGGCTGGTGCAGGTGTTTGGATTGTTCAACAGAACGTTCCAACCGTCGAACGTGTCGATTCTAAAGATAATAACACTCGTAAACGTCTTGGTGTTATCTCACTGGCAAGCCAGACTGAAGCGAACGTTGATTTTGAAAATGCTCCTATTAAAGAATCAGCTATTACTCCTGAAACATTAGCTAATCGCGTGGCGACCGAGTCTCGTCGTGGTATTGCACGTATTGCTACAACTGCACAAGTTAACCAAGATACTACATTTGCTTTCCAGGACGATTTAATTATCTCTCCTAAGAAATTAAATGAACGTACTGCTACTGAAACTCGTCGTGGTTTAGCTGAAATTGCAACTCAAACTGAAACCAACCAAGGAACAGATGATAGTACCATTATAACGCCGTTGAAGTTGACAGCACGCAAGGCATCTGAAACTTTAACAGGTATCGCTAAGCTGGTATCGACTGTAGGCACCGCACCAGGTGTAGATCGTCCAACTCTTGGTACTAACGTGTATAACAGTGCTAATAATATTGATATCGTGACTCCTATGTCATTGTCTCAATTAAAAGGTACTTATACCGAACAGGGTCTTTGGATTGGTGCAATTGAATCTGAAGTCATCGCTGGTGTAATGAACAACGGTTTCCCGAACGGTGTTGTTACTCCTGAAATGCTTCATAAGAAAACCTCTACTGATTCTCGTATTGGTCTGATTCAAATTGCTAAACAGACTGAAGTAGATGCCGGTACTGATTACACTAAAGCTGTTACTCCTAAAACTCTGAATGACCGTAAGGCTTCCGAGACTTTAACGGGTATTGCCGAAATTGCAACCCAGGCGGAGCTAGATGGCGGCACAGATGATGTACGTATTTCTACTCCTTTGAAAATTAAAACCCACTTCGCTGATACTACGCGTCGTGAAGTGACTGCTGCGTCTGGTCTCGAAGTTACCGGTACGGTATGGGACAAAATAAGTTTCAACATCAAACCTTCTGCTGAAGCACAACGCGGTACTTCCCGTCTTGCAACACAAGGCGAAGTTGATACTGGCACAGATGATGCGACAATTGTTACACCACTTAAGTTACAGCGTAAAAAAGCCACTGAAGGTACCGAAGGTATTATTCAGGTTGCTACTCAGGCAGAAGTTATTGCTGGGACTAATGGCTTAAAAGCTGTTCCACCTGTTCATTTGAAATATATTGCACAGACGGAAAAAACTTGGGAAGCTACTGCAGCTCGTCGTGGTTTCGTTAAATTAACTGAAAATACCTTGACGTTTAAAGGTGATGCAGTTAATGGTTCTGGTCGTTTACTGCCAGATGGAAGTGCAAACCTCCCGGCTCTTGATGGTTTAATGAAAGATGGATTTGCCGTATCTCCATATGAGATGAACCGTGCACTTCAGTATTTCTTACCAGCAAATGCTAAAGCTGTTGACACCGATAAATTAGATGGCCTGGATTCACTTCAGTTCATTCGTCGTGATGTCGACCAATCGGTTGAAGGTAAACTCACTTTAACTAAAGAAACGATCCTGACGGCGCCTCTGACATCCAGCACTTATGCTTCATTCGCTGGTACACTGAGTGCTAAAGACATCGCAACTGAAGGACCTATTATTATTCTTAATGGTACTAACCGTTGGAATATAAGAGCTCTTAATAACGCGACAACTCTTACTTTTGGTAATACAGCTAACGTACTGACCATTAATAGTGCGACTGGTAACGTTGCTGCTCAGAATAACCTTTCTGCTGGTGCTGAAGTTAGCGCTACCACTAAGTATAATCTGAACAGTCGAACTGTTATTGAGACCACAGCAGGAACTCCTAATGCAACATTAGCAGTCGGTGATAATGCTCAAAACCTGGTTCTGAAAACTTTAGATGCCGGTAATATCGTTGCAAATGGCGGTGGTGCATATAAAGTATTGACCGAGAAGAATGCTAAAGAAATCGTTGACCGTGACTTCGTCAAGAAAGAAGGCGATACGATGGGTGGCAAACTGAACATCAATGCTCCTGTTCTGCCTAAAATCACTGAAGCGCAAGCATTGGCTCCTTTGAATACGAATAACTTCGGTTTCTGGACTGCGGATATAACAACTCCGACTGAATATCAGAAGCTTCCAGGTTATGCTGTTCCTGTGATGGAAATAATCGATGGTTCTTCAACCGGCCATGTCGATCATTATGATTACGTTAAGGCTCCAGGTGTAATGACCGGTACTGGTACTTCATTGACCAGTATGACTCGTACTTGGACTCCACGTCCTCAGTCTATTCAAGATAACCATAATGCTAACACCATTTGGATTTCTGTTTGGGACTTGGCTCGTAATAAATGGGGTGAATGGGGACGTGTGTATACGAATCAGGCTCCACCAACTGCTGCTGAAATTGGTGCTGTGTCTTCTTCAGGTTCTGCATTTAATAACCTGACTATTCGTGATTGGTTGCAAGTTGGCCAAGTACGTATTGAGCCGGACCCAGACACTCGTTCAGTTAAATTCACTTGGGTAGACATTCCGTAA

Tertiary structure

PDB ID
0d0f258eef269cb0e37d4928d6ac213bdb4c9fc98de269997c74dba83725cc8e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2259
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of 24 phages infecting the plant-growth-promoting rhizobacterium Klebsiella sp. M5a1 Gittrich,M.R., Sanderson,C.M. and Sullivan,M.B. 2025-02-21 — GenBank