Protein

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Genbank accession
YP_010665264.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MADTQTSNYQLTKPEVGGSPDTWGDKTNNNWDKVDTLIKKNDASLDSVALRTTYHADDWIGIYDSQTAGFPIGRIKLSSILGDIPNIYAKKAGDTFTGTVDVRSAADTGFIRLGSGTTTLAGGLSIYNPDGTRKFYMGGDTKAGPINFLAENGASRFHFSGAEVVSKDQANSFRMVYGGASAFWRNDGNTMYLMFSDTEFGSYNTLRPFAANRATGRVTIGNGLTVVGDISGTSSWANGANYADRLGYGGWTLATVQDQLNWRVTDTRVDGYFQNECRTTGSTGTVNTGGSGYFVTVISKRAGVEVLDIALRQPQRYIPNQGWRAIGGW
Physico‐chemical
properties
protein length:329 AA
molecular weight: 35538,84080 Da
isoelectric point:6,74283
aromaticity:0,11246
hydropathy:-0,40122

Domains

Domains [InterPro]
DC_0932
STR
3–315
DC_0932
IPR048390
ATT
151–209
IPR048390
YP_010665264.1
1 329
Architecture
STR
ATT
STR
STR 3-150 | ATT 151-209 | STR 210-315 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ochrobactrum phage vB_OspP_OH
[NCBI] 		2712957 Uroviricota > Caudoviricetes > Wolominvirus >
Host Ochrobactrum sp. POC9
[NCBI] 		2203419 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Brucellaceae > Ochrobactrum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010665264.1 [NCBI]
Genbank nucleotide accession
NC_070933 [NCBI]
CDS location
range 28077 -> 29066
strand -
CDS
ATGGCTGATACACAAACCTCGAATTACCAGTTGACTAAGCCAGAGGTAGGCGGTTCACCCGACACTTGGGGCGACAAGACCAATAACAACTGGGACAAAGTGGACACCCTGATCAAGAAGAATGATGCTTCTCTTGACAGCGTAGCTTTGCGTACCACCTATCACGCTGACGACTGGATTGGTATTTATGACAGCCAGACTGCTGGTTTCCCAATAGGGCGCATCAAGCTTAGCTCCATTCTAGGCGACATCCCCAACATCTACGCCAAGAAAGCGGGTGACACGTTTACTGGCACTGTTGATGTACGGTCCGCAGCTGACACTGGGTTTATTAGGCTCGGTTCGGGTACCACAACGCTTGCTGGCGGTTTGTCAATTTACAACCCGGACGGTACTAGAAAATTTTACATGGGCGGTGACACAAAAGCCGGCCCTATAAATTTTTTAGCCGAAAACGGAGCCTCTAGGTTCCATTTTTCAGGTGCCGAAGTGGTATCCAAAGATCAGGCGAACTCTTTCCGCATGGTCTACGGTGGTGCTTCCGCGTTTTGGCGTAATGACGGCAACACTATGTATCTGATGTTCTCAGATACTGAGTTCGGCAGCTACAACACCCTTAGGCCTTTCGCGGCAAATAGAGCCACGGGCCGCGTTACTATAGGCAACGGCCTTACAGTTGTTGGTGATATCTCTGGTACCTCTAGTTGGGCTAACGGTGCTAACTATGCTGATAGGCTTGGCTACGGTGGATGGACGCTAGCTACTGTTCAGGATCAGCTTAACTGGCGCGTCACCGATACCCGCGTGGACGGGTATTTTCAAAATGAATGCAGAACGACCGGCAGTACGGGCACCGTTAACACTGGCGGTTCCGGGTATTTTGTAACCGTAATAAGCAAGCGTGCTGGGGTAGAAGTACTTGACATCGCTCTTAGACAGCCGCAGCGTTACATTCCTAATCAGGGCTGGCGAGCTATTGGAGGCTGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
55955f1734d60a2938526a8c7fbfb9538c75ce50733731f1fb23c8332d1f8a04
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6729
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. Decewicz,P., Golec,P., Szymczak,M., Radlinska,M. and Dziewit,L. 2020-03-18 — GenBank