Protein

View in Explore
Genbank accession
YP_010668122.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATNDFLVFGGGSSPNVIDQATYAALSARLSGFQSGTALSAQLNKVWRQSSIMAAVLAQFTANFSGQNSVDDGSTATLLANLQAAINAAGITAPQFDSSTKLATTAFVQQANGNFQARQVVYGTTSITNAASGSWIECAGAGGYTITLPNPSATNLSLTFSNVSNGVVTLATPSASIYDQGNPASTFQIDQNAVVKLASDGNWVVIDCYSPTPKATSPALGDNSKRLATTAWYWNQISAGVSSAGKVNGVNSPNLLFNGSAEFGVAGGWGGGFVNAYNGGSGDGTYFSNPAAINSNSYVGSSPIAIAAGIQLTLSGEIYSAGVTSGIAWFRLVYLNSSSGVISTSANITATNGAGWTFASSSFTTPANTAFVYVQLGVEAPGPNVSSGGVAWRRLKLERGAAPSLYSQEASVAALPAMHGIARFTSSGTFTVPPGVTTLYVSGCAAGGGGGAGAGNNNGQSSLVGGGGGGGGGAGQSVIRQAFTVTPGAAITVTIGAAGAAGTGGVVGAGGAGGTGGNTTLNGGVSLTLTGGAGGSGGAAVVSNAVGQGGGGGGGGTGYPNGSAGGDGNYAGLGGAGASSPFGGGGGSGRAATNTSAYQAGSAAGGFGAGGGGGGAGYGQASTAVTGGAGAVGTAGLIIFEW
Physico‐chemical
properties
protein length:642 AA
molecular weight: 61453,45670 Da
isoelectric point:5,82983
aromaticity:0,08100
hydropathy:0,15047

Domains

Domains [InterPro]
DC_1450
STR
1–235
DC_1450 G3DSA:2.60.120.260 IPR049304
DC_0654
STR
300–642
DC_0654
YP_010668122.1
1 642
Architecture
STR
STR
STR 1-235 | STR 253-642
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage Magia
[NCBI] 		2767577 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia cenocepacia
[NCBI] 		95486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010668122.1 [NCBI]
Genbank nucleotide accession
NC_070954.1 [NCBI]
CDS location
range 19360 -> 21288
strand +
CDS
ATGGCAACGAACGACTTTCTCGTGTTCGGTGGAGGCAGCTCCCCGAACGTTATCGACCAGGCGACGTATGCGGCGCTGTCGGCCCGTCTGTCTGGATTTCAATCTGGCACCGCGCTGTCGGCGCAGCTCAACAAGGTGTGGCGCCAGAGCTCGATCATGGCTGCCGTGCTCGCACAGTTCACGGCGAACTTCTCCGGCCAGAACTCGGTCGACGACGGCTCGACGGCGACGCTGTTGGCGAACTTGCAGGCTGCGATCAATGCTGCGGGGATCACGGCTCCGCAGTTCGACAGCAGCACGAAGCTTGCCACGACCGCCTTCGTTCAGCAGGCGAACGGGAACTTCCAGGCGCGCCAGGTCGTTTATGGCACCACGTCGATCACCAACGCCGCAAGTGGGTCTTGGATTGAGTGTGCTGGCGCGGGCGGCTATACGATCACGCTTCCCAATCCGTCCGCGACGAATTTGTCACTCACGTTCTCAAACGTGAGCAACGGTGTTGTCACTCTCGCCACGCCATCGGCAAGCATTTATGACCAGGGAAATCCGGCGTCAACGTTCCAGATCGACCAGAACGCAGTCGTAAAGTTAGCGAGCGATGGAAATTGGGTTGTAATCGACTGCTATTCGCCGACCCCGAAGGCGACGAGCCCTGCATTGGGGGACAACAGCAAGCGGCTCGCTACGACTGCGTGGTATTGGAATCAGATCTCAGCAGGCGTCAGTTCGGCCGGGAAGGTGAACGGCGTCAATAGTCCGAACCTATTGTTCAATGGCTCTGCCGAGTTTGGAGTTGCAGGCGGATGGGGCGGTGGCTTCGTCAATGCATACAATGGGGGCTCAGGAGACGGAACGTATTTTTCGAACCCGGCTGCGATCAATTCAAACTCCTATGTCGGCAGTTCGCCCATCGCGATTGCGGCAGGGATTCAGTTGACGCTTTCGGGAGAGATTTACTCTGCTGGCGTTACGTCTGGCATCGCGTGGTTTCGACTCGTTTATCTGAATTCTTCGAGCGGTGTAATCAGCACGTCCGCGAACATTACGGCAACGAATGGCGCTGGGTGGACATTTGCATCGTCCTCCTTCACGACTCCGGCCAACACTGCTTTTGTTTACGTGCAATTGGGTGTTGAAGCTCCGGGACCGAATGTTTCCTCGGGCGGTGTGGCTTGGCGCCGCCTCAAGCTCGAAAGAGGGGCTGCGCCGTCCCTCTATTCTCAAGAGGCAAGCGTCGCCGCGCTACCGGCGATGCACGGCATTGCACGCTTCACTTCGTCCGGCACGTTCACGGTGCCGCCGGGCGTAACGACGCTCTATGTGAGCGGTTGCGCAGCCGGCGGCGGCGGCGGTGCCGGTGCCGGCAACAACAACGGGCAGTCGTCGCTTGTCGGCGGTGGTGGGGGTGGCGGTGGTGGCGCGGGACAGTCGGTGATTCGGCAGGCGTTTACCGTCACTCCCGGTGCGGCCATCACGGTCACCATCGGCGCCGCTGGTGCCGCGGGAACTGGTGGCGTGGTAGGCGCGGGCGGCGCAGGTGGCACGGGCGGAAACACGACTTTGAATGGCGGCGTGTCACTCACCTTGACGGGCGGCGCAGGAGGTAGCGGCGGCGCAGCTGTCGTGTCGAACGCGGTCGGACAGGGTGGCGGCGGCGGTGGCGGTGGCACTGGCTACCCGAATGGCAGCGCGGGCGGCGATGGGAATTATGCGGGATTGGGTGGAGCGGGGGCATCGTCACCGTTCGGTGGTGGTGGCGGCTCTGGCCGCGCAGCAACGAATACGAGCGCCTATCAGGCAGGGAGTGCGGCGGGCGGCTTTGGGGCCGGCGGCGGAGGCGGCGGGGCAGGCTACGGCCAAGCGTCGACGGCTGTTACGGGTGGCGCAGGCGCCGTCGGCACTGCAGGTTTGATCATTTTCGAATGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d8a84564ae8935cf9e1e92d7c039fba8203d437295e25254d45eb345a8f3e7df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7681
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Burkholderia cenocepacia myophage Magia Gafford-Gaby,D., Yao,G.W., Hernandez,I., Clark,J., Gonzalez,C., Gill,J. and Liu,M. 2021-02-11 — GenBank