Protein

View in Explore
Genbank accession
QNG62558.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MADRRFINQFPSASPEVIATGSLIIEANGQEYRATTAVLGGVHLFFLDEDNRTPVVQFRLTSPGRTVENVPVTLTVTAPNGTVTTKSATTDALGNGQYDFTGILARGQTYTIEARAAIYLTATTQKTINALSAPIDTVTATSTGKVGDTITLGALNFNGNPTSFRYRCLRGSSYVIPGAEASTYTLQPDDDGDVITMQVQATNAGGDSPWYSANGIGPVSNKTSVLLAAPVISGSTAPGGRLTVNSPGSASENAVVKSDEWQINQAKIPALKAPLTRYLAATTGVSSPTGYPDGNNHHGVGLSSAAYAGTNTFSFSVGISATENDYIATQIGATGGNEGPQPYTLAIRHLNTNSLIRIKMFAAKYRGGVLVEEVQMSKVGATAGQELAELAATANSTSQWTLTHDFGEWLEGDWLVFRQQARNTSASSTNNYQWDSRAGASYAILPIGNVQDLQKTLSSFTTRADMAGKKVRLARTFSNRNNDVVAYSNEITLAAAATQTQTPVNTALPTIFSTSDRSNTTWQIDLGAWSNQPTGYTVQWRANGVDIPGATLMSYKPTSAQEGQTITCVVTATNGVGVPTSAATAGKVVQAAAAFWNIATGNDLNDGLTAEFAKQNLAGTDTIPSGATAILSGDFGTRLKLGSFRTYEGLGAALTSIGSTSIAYAIDHYSDDGSLGRSNVIIRKMRITSGDRAIMARQGSNWVIEDVVIDSAGYNPIGPAENASGIYFYRNNGITLRRVQLLQVMSDGLYSDTNDRVMIEDCVFLPVNTAEGDTIQTRADRNDSNGAPGPHQKGFLMRGTFLDMHSRKTSSGKGCLVTNMHDYILIHDNIMDGNNFVHGTDEGDNQVFCRNTSRYARKNSYSFGYGIGGYDNQPASHNHHIYDNSWYDFNRALSFTGISVTGYTGTKSGRVDIVAHDETIVKCANGVRIDRPTSGRFRGFVFHNVSKSLDRTLTTLPAGGDIQAFLWSDHYIYNGSIAEPPKVFARAQITGNRVSGATLSGPDTIFDTAAVLAAFPTAQITRSYQWRRHKPAVQWANWTGVHLGYMCEWIEGATSSSYTVTDADQGCLVSRVDRIHLTFTEAGVSKTITALAYDATYATSTPILRTGDHAVALSAMPTSGNVSAAAGEGAVVLDLPALLPGETRTLLHPSRGYDAYTGTAVTLDANGDLLRGAGALTAGNTVSFKIRQKRGIDVIDTSASLTVVA
Physico‐chemical
properties
protein length:1205 AA
molecular weight: 128266,14610 Da
isoelectric point:6,21201
aromaticity:0,08133
hydropathy:-0,20880

Domains

Domains [InterPro]
DC_1007
ATT
111–251
DC_1007 G3DSA:2.60.40.2700 DC_2223 IPR011050 G3DSA:2.60.40.2700
G3DSA:2.60.40.2700
RBD
124–209
G3DSA:2.60.40.2700 DC_0400 DC_0572
QNG62558.1
1 1205
Architecture
ATT
STR
RBD
ATT 111-251 | STR 252-976 | RBD 977-1205
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNG62558.1
1 1205
Domain Start End Length (AA) Confidence
N-terminal 1 234 234 0,7733
Central domain 235 463 230 0,7407
C-terminal 464 1205 741 0,1843
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-234
Central
235-463
C-terminal
464-1205

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage B1VFA
[NCBI] 		2759201 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhizobium leguminosarum
[NCBI] 		384 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNG62558.1 [NCBI]
Genbank nucleotide accession
MT770738 [NCBI]
CDS location
range 33502 -> 37119
strand +
CDS
ATGGCTGATCGCCGCTTTATCAACCAGTTCCCGAGCGCGTCACCCGAGGTGATCGCAACCGGCAGCCTGATTATTGAAGCAAACGGACAGGAATATCGCGCGACGACGGCAGTCCTCGGCGGGGTGCATCTGTTCTTCCTGGATGAAGACAACCGCACGCCGGTCGTGCAATTCCGCCTCACCAGCCCCGGCAGGACGGTCGAAAACGTCCCGGTAACGTTGACCGTGACCGCGCCGAATGGAACCGTCACCACGAAGAGCGCGACCACCGACGCCCTTGGCAACGGCCAGTATGACTTCACCGGCATCCTGGCACGCGGCCAGACCTACACGATCGAAGCCCGTGCGGCGATCTATCTGACCGCGACGACGCAAAAGACCATCAACGCGCTGTCCGCACCGATCGACACCGTCACGGCCACGTCGACGGGCAAGGTTGGCGACACTATCACCCTCGGCGCGCTGAACTTCAACGGTAACCCGACCAGCTTCCGTTATCGCTGCCTGCGCGGCTCAAGCTACGTCATTCCCGGCGCCGAAGCTTCGACCTATACGTTGCAGCCGGACGATGACGGCGACGTTATTACCATGCAGGTTCAGGCCACCAATGCAGGTGGCGACAGCCCCTGGTATTCCGCAAACGGCATTGGCCCGGTCTCCAATAAGACCTCTGTGCTGCTTGCGGCTCCCGTCATCAGCGGTTCCACCGCGCCTGGCGGCCGGCTGACTGTCAACTCGCCCGGCTCCGCAAGCGAGAACGCCGTCGTCAAGTCCGACGAGTGGCAGATCAACCAGGCCAAGATCCCGGCGCTGAAGGCCCCGCTCACGCGCTATCTGGCCGCTACTACGGGTGTCTCTTCGCCGACGGGTTATCCTGACGGCAATAACCACCACGGCGTCGGCCTCTCTTCTGCGGCATATGCCGGCACCAACACGTTCAGCTTCTCGGTGGGCATCAGCGCCACGGAGAACGACTATATCGCCACTCAGATCGGCGCGACCGGTGGCAACGAAGGCCCTCAGCCTTACACCCTCGCCATCCGGCACCTCAATACGAACAGCTTGATCCGCATCAAGATGTTCGCGGCGAAATATCGGGGCGGCGTGCTGGTCGAGGAAGTCCAGATGTCCAAGGTCGGCGCAACTGCCGGCCAGGAGCTGGCCGAACTGGCTGCGACCGCCAACAGCACCTCACAGTGGACGCTGACGCATGATTTCGGCGAATGGCTCGAAGGCGATTGGCTTGTCTTCCGGCAGCAGGCCCGCAATACCTCGGCGTCCTCGACCAACAACTATCAGTGGGATTCACGTGCAGGCGCGTCCTACGCCATCCTTCCCATCGGTAACGTCCAGGATCTCCAGAAGACGCTGAGCTCGTTCACGACCCGCGCCGACATGGCAGGCAAGAAGGTCCGGCTCGCTCGCACTTTCTCCAATCGCAACAACGACGTGGTCGCCTATTCCAACGAGATCACCTTGGCAGCGGCAGCCACTCAGACCCAGACTCCGGTTAATACGGCGCTGCCGACGATCTTCTCGACCTCCGACCGTTCCAATACCACCTGGCAGATCGACCTCGGTGCGTGGAGTAACCAGCCGACCGGCTACACCGTCCAGTGGCGGGCCAATGGAGTCGATATCCCCGGCGCCACGCTCATGAGCTACAAGCCGACGAGCGCTCAGGAAGGTCAGACGATCACCTGCGTTGTGACGGCGACGAACGGCGTCGGTGTGCCGACGTCGGCAGCAACCGCAGGCAAGGTTGTCCAGGCGGCCGCGGCCTTCTGGAACATCGCAACCGGCAACGACCTCAATGACGGCCTGACTGCTGAATTTGCCAAGCAGAACCTGGCGGGCACCGACACCATCCCGTCGGGCGCCACGGCCATTCTGAGCGGCGATTTCGGCACGCGGCTGAAGCTCGGCAGCTTCCGCACTTATGAGGGTCTCGGCGCTGCGCTGACCTCGATCGGCTCGACCAGCATCGCCTACGCCATCGACCACTACAGCGACGATGGCTCGCTCGGCCGCAGTAACGTCATCATCCGCAAGATGCGCATCACCTCTGGTGACCGCGCCATCATGGCACGCCAGGGCAGTAACTGGGTGATCGAAGACGTTGTGATCGACAGCGCCGGCTACAATCCGATCGGCCCGGCCGAGAACGCGTCTGGCATCTATTTCTATCGCAACAACGGCATCACGCTGCGCCGCGTTCAGCTGCTCCAGGTGATGTCCGACGGTCTCTATTCCGACACCAATGACAGGGTGATGATCGAGGACTGCGTCTTCCTGCCGGTTAACACGGCCGAAGGCGACACCATTCAGACCCGTGCTGATCGCAACGACAGCAATGGCGCACCTGGTCCGCACCAGAAGGGCTTCCTCATGCGGGGAACCTTCCTCGACATGCATTCGAGGAAGACCTCGTCCGGCAAGGGCTGCCTCGTCACCAACATGCACGACTATATCCTGATCCATGATAATATCATGGACGGGAACAACTTCGTCCACGGCACGGACGAAGGCGACAATCAGGTCTTCTGTCGCAACACCAGCCGCTATGCGCGAAAGAACAGCTATTCGTTCGGCTATGGCATTGGTGGCTACGACAACCAGCCGGCCTCGCACAATCACCATATCTACGACAATTCCTGGTATGACTTTAACCGGGCGCTGTCGTTCACCGGTATTTCGGTCACCGGCTACACCGGCACCAAGTCTGGGCGCGTCGACATCGTTGCCCATGATGAGACGATCGTTAAGTGCGCCAACGGCGTTCGTATCGACCGTCCGACCTCGGGTCGCTTCCGTGGCTTTGTCTTCCACAATGTTAGCAAGTCGCTCGATCGGACGCTGACCACGCTGCCGGCGGGTGGTGATATCCAGGCGTTCCTCTGGAGCGACCACTACATCTATAACGGCAGCATCGCAGAGCCGCCCAAGGTCTTTGCACGCGCACAGATCACCGGCAACCGTGTTTCGGGTGCGACTCTGTCGGGTCCGGATACCATCTTCGACACGGCAGCGGTGCTCGCGGCATTCCCGACCGCGCAGATCACCCGCTCCTACCAGTGGCGCCGGCACAAGCCTGCCGTCCAGTGGGCAAACTGGACCGGCGTTCACCTCGGCTACATGTGCGAATGGATCGAGGGTGCGACCTCGTCCAGCTACACGGTCACGGATGCGGATCAGGGCTGCCTGGTCAGCCGCGTCGATCGTATTCACCTGACCTTCACCGAGGCCGGTGTTTCAAAGACGATCACGGCTCTGGCCTACGATGCGACCTACGCCACTTCGACGCCTATCCTGCGCACCGGAGACCATGCTGTTGCCCTGTCGGCAATGCCGACCTCTGGTAACGTCTCTGCAGCCGCTGGAGAGGGTGCGGTCGTTCTCGACCTGCCGGCACTGCTGCCTGGCGAAACGCGCACGCTGCTGCACCCCAGCCGCGGCTATGACGCCTACACGGGCACCGCGGTCACTCTCGACGCCAACGGTGACCTGCTGCGCGGCGCAGGAGCACTGACGGCTGGCAACACGGTCAGCTTCAAGATCAGGCAGAAGCGGGGCATCGACGTGATCGACACCTCGGCCTCTCTGACGGTCGTTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9b53276431a77c66384247af7323c44b23ba0e4e7077df3e589c5bd03d0aa557
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2695
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhizobium leguminosarum bacteriophage vB_RlegS_B1VFA Gunathilake,D., Mackenzie,K.D., Yost,C.K. and Hynes,M.F. 2025-10-09 — GenBank