Protein

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Genbank accession
WWT36672.1 [GenBank]
Protein name
straight tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MNNTINHVKDDAQYVKFDPTGNWPSNIKNVQAALAAIQGFAIAGLPTATEETAGIAEIATQKEVDDGLDGTKIVTPKTLAVKLSRPDATKFVKGITRYANNDEAMGDTPNIAIGPDTLTHVFAKKKATETVQGTIKICSMDAAKIGSDDTMAVTPKKMHAAIAQIVPGLIPEQNTASESREGLVRLATSQQTLAGTIREGFAVSPYAFANARANENQAGTVKIASSQQMIDGNDNTVVVSAQKFANTKATTGQFGVVKLTDNPGSGEPNSALSANARVLSLSGGVVTGDVYRHGHGDGNQFTTKNEMDAWCMPIGAIILTAFNSNDHGAFKICNGQWLNKHQYPVLFSRIGFTYGGDGGDHFAVPDMRGLVARGCDWGRGLDPGRGFGTYQDDTMQRINGQFPVANRYRGWANGAFSLIGGQWNTNYKNGKGDDWGAIVDFDSARQVRTSGETRVKSLALNYVIRVQ
Physico‐chemical
properties
protein length:467 AA
molecular weight: 49896,31040 Da
isoelectric point:7,67323
aromaticity:0,07495
hydropathy:-0,34989

Domains

Domains [InterPro]
DC_0176
STR
1–417
DC_0176
SSF69349
STR
246–319
SSF69349
IPR037053
ATT
292–368
IPR037053
SSF88874
STR
311–466
SSF88874
IPR011083
ATT
315–371
IPR011083
WWT36672.1
1 467
Architecture
STR
ATT
STR
STR 1-291 | ATT 292-371 | STR 372-466 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UPWr_E1
[NCBI] 		3127569 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWT36672.1 [NCBI]
Genbank nucleotide accession
PP418985.1 [NCBI]
CDS location
range 133548 -> 134951
strand -
CDS
ATGAATAACACTATTAATCACGTAAAAGACGATGCACAGTATGTTAAGTTTGACCCTACCGGAAATTGGCCTAGCAATATAAAAAACGTACAAGCGGCATTAGCCGCTATTCAGGGGTTTGCTATTGCAGGTCTTCCAACGGCAACCGAAGAAACAGCGGGTATTGCTGAAATTGCTACGCAAAAAGAAGTAGATGACGGATTGGATGGAACTAAAATTGTTACCCCAAAAACATTAGCTGTTAAACTGTCAAGACCGGACGCAACAAAATTTGTTAAGGGTATCACTCGTTATGCTAACAATGATGAAGCTATGGGAGATACGCCAAACATCGCAATTGGTCCAGATACATTAACTCATGTCTTCGCGAAGAAGAAAGCAACTGAAACCGTACAGGGTACAATTAAAATCTGTTCTATGGATGCGGCAAAAATCGGTAGCGATGACACTATGGCAGTTACGCCTAAAAAGATGCACGCTGCTATTGCTCAGATTGTTCCTGGATTGATTCCAGAGCAAAACACAGCGTCAGAATCCCGCGAGGGTTTAGTACGACTCGCGACAAGCCAACAAACGCTTGCCGGGACTATTCGAGAAGGATTTGCTGTTAGCCCTTATGCATTTGCTAATGCACGAGCAAATGAGAATCAGGCGGGTACTGTAAAAATTGCATCATCCCAGCAAATGATTGATGGTAATGATAACACTGTAGTAGTATCAGCACAAAAATTTGCAAACACTAAAGCAACAACTGGACAATTTGGCGTTGTTAAACTAACAGACAATCCCGGTTCTGGTGAGCCTAACTCGGCGCTATCTGCAAATGCTCGTGTGTTGTCTCTAAGCGGTGGTGTAGTTACGGGTGATGTATATCGTCATGGACATGGCGACGGAAACCAGTTTACCACTAAAAACGAAATGGATGCATGGTGTATGCCAATTGGTGCAATTATTCTAACTGCATTCAATAGCAATGATCACGGTGCATTCAAAATCTGTAACGGGCAATGGTTGAATAAACACCAATATCCAGTATTGTTTTCTCGCATTGGATTTACATACGGCGGTGATGGTGGAGATCATTTCGCTGTTCCAGATATGCGCGGTCTTGTTGCTCGTGGATGTGATTGGGGTCGAGGCTTAGATCCAGGTCGCGGATTTGGTACGTATCAAGATGATACCATGCAAAGGATAAATGGTCAATTCCCTGTAGCTAACCGCTATCGTGGATGGGCTAATGGCGCATTTAGTCTCATTGGTGGTCAATGGAACACCAACTATAAAAACGGTAAGGGCGATGATTGGGGTGCTATAGTAGACTTTGACAGCGCAAGACAGGTTAGAACGTCTGGCGAAACTCGCGTTAAAAGCCTTGCATTAAACTACGTTATAAGGGTACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5f00d9ca0b75b1c5128907d281a302515533fe75538a6d765ddcd5e3a92a5b32
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7614
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage cocktail for biofilm control in poultry environments Sliwka,P., Saez Moreno,D., Korzeniowski,P., Milcarz,A., Kuczkowski,M., Koziol,S., Narajaczyk,M., Kolenda,R., Roesler,U., Tomaszewska-Hetman,L. and Kuzminska-Bajor,M. 2014-04-04 — GenBank