Protein

View in Explore
Genbank accession
QPB10367.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,57
Protein sequence
MPAIIPVIIMAGAAAIGGTAAIVIGTVLAVGASLLLQSKTSGVASQSSQPTVYQTNPTQLTFTADAPRRMVYGKARISGVVTYANVSGDGHEYLWLVVVVAAHQITDITAMYFNGEAASEVASGYFDWWWHDGTQTTADPQLVATFPEYTEKCILQGCAYAVVKLKFDKTVYKNGRPNITFDIKGKPLYDHRVGLTQWSNNAALATIDFMRSVDGLNATDDEIDWASVDAAADVCDQVPEQMAASLCDGRYTIDGVVELSSKNGDIINQMLAASAGTVVWTQGKYRIYVGAARAVSTRKITQDDLRGNPTLQPRTPADQSFNGVKGTFLDSTNNWQFSDFPPVKGAEYIAQDGGVEQYKDIVLNFTTSPITAQRLATIFLRRARLEKTITLPCKWTCFNYEVWDVIPLNLPMLGWVDKLFQVTDWRMIPPSGSDAGGVELVLTEYSDDLYSDDMDLKPITGGGTIVKPDVTIPKPPASLTAVSGLTAVNQQTGAPRIKFDWTQSNDIYCVGYEIAYSNYPFSPAESDYKYVSGRNTTTFMTEDLKAGDTYIGYIRVVNSFEKRSDPIPSNTVIIKGSGAELPEALQGLTATNVDDMFADISWTAPTGNNADFVQLMWADKGEPTNAIELAVIPMPSTTTRVQRNLQNGYYFARFMSKAGLFGDWGFVYATGRPATGVLLQSLSLSQYDGDLVGGIWYNPTLAVSKSQRLASELGWEVFDMMVPEPFGEIDYFAKNATYVASAHTLRISGSVGWHRAPNIPNTLPRIDAVAQLAYFDETEYRGGVVLLPKDANIKVGFKAPHSEPQGVVVSGFIGTIEDLT
Physico‐chemical
properties
protein length:820 AA
molecular weight: 89383,91590 Da
isoelectric point:4,81485
aromaticity:0,10366
hydropathy:-0,09659

Domains

Domains [InterPro]
DC_0187
STR
1–766
DC_0187
IPR032876
ATT
265–411
IPR032876 IPR013783
IPR003961
STR
481–577
IPR003961
IPR036116
STR
483–650
IPR036116
QPB10367.1
1 820
Architecture
STR
ATT
STR
STR 1-264 | ATT 265-411 | STR 412-766 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage Ab_SZ3
[NCBI] 		2781361 Uroviricota > Caudoviricetes > Lokivirus >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB10367.1 [NCBI]
Genbank nucleotide accession
MW151244.1 [NCBI]
CDS location
range 1170 -> 3632
strand -
CDS
ATGCCTGCTATTATTCCCGTTATCATTATGGCGGGCGCTGCGGCGATTGGTGGTACAGCCGCAATCGTTATCGGTACGGTCTTAGCCGTTGGCGCTTCGTTATTATTACAGTCTAAAACTTCGGGGGTTGCTTCGCAGTCTTCACAGCCCACAGTTTACCAGACTAACCCGACACAATTAACATTCACAGCCGACGCCCCTCGCCGAATGGTTTACGGTAAAGCGCGTATTTCTGGCGTTGTGACTTATGCAAACGTAAGCGGTGACGGTCACGAATATTTATGGCTCGTTGTTGTTGTAGCAGCGCACCAGATTACGGACATCACAGCGATGTATTTTAACGGCGAAGCTGCGAGCGAAGTCGCAAGCGGGTATTTTGATTGGTGGTGGCACGATGGTACGCAGACAACAGCCGACCCGCAGTTAGTCGCAACGTTTCCCGAATATACTGAAAAATGTATTTTGCAGGGTTGCGCCTATGCTGTCGTCAAATTGAAGTTCGACAAAACGGTTTATAAAAATGGTCGTCCGAACATTACTTTCGACATTAAGGGCAAGCCGTTATACGATCATCGTGTCGGGCTTACTCAATGGTCAAATAATGCGGCATTGGCGACTATTGACTTTATGCGTTCGGTTGACGGTCTTAACGCTACTGACGACGAAATTGATTGGGCTAGTGTCGACGCTGCGGCAGATGTTTGCGACCAAGTACCCGAACAAATGGCGGCGAGTCTTTGCGATGGTCGTTACACTATCGACGGCGTTGTTGAATTGTCAAGTAAGAACGGCGACATTATTAACCAGATGCTTGCGGCTTCTGCGGGTACAGTCGTATGGACGCAAGGAAAATACCGCATATACGTCGGAGCAGCGCGGGCAGTTTCTACACGTAAAATTACGCAAGACGATTTGCGCGGCAATCCGACATTACAACCACGTACACCCGCCGACCAAAGTTTCAACGGTGTAAAAGGTACGTTCCTTGACTCTACGAATAATTGGCAGTTTTCGGACTTTCCACCTGTCAAGGGTGCGGAATATATTGCACAAGACGGCGGTGTCGAACAGTACAAAGATATTGTTTTGAACTTTACAACGTCACCGATTACGGCGCAACGTTTGGCTACTATTTTCTTACGTCGTGCGCGTCTTGAAAAGACTATCACTTTACCGTGTAAGTGGACTTGCTTTAATTACGAAGTTTGGGACGTCATCCCGTTAAATCTGCCTATGCTTGGATGGGTTGACAAACTGTTTCAAGTTACCGACTGGCGAATGATTCCGCCTAGTGGTTCCGACGCGGGCGGTGTTGAACTTGTTTTGACTGAATATTCGGACGATCTATATTCCGACGATATGGACTTAAAGCCGATTACTGGCGGCGGTACGATTGTTAAACCTGACGTTACGATACCGAAACCGCCTGCGTCATTGACTGCCGTTTCTGGTTTGACAGCGGTCAATCAACAGACAGGCGCACCGCGCATAAAATTCGATTGGACACAGTCGAACGACATTTACTGCGTAGGTTACGAAATCGCATACTCAAACTATCCGTTCAGCCCTGCGGAGTCGGATTATAAGTATGTAAGCGGTCGAAACACTACGACGTTTATGACCGAAGATTTAAAAGCGGGCGACACTTACATCGGTTATATTCGTGTTGTCAATTCGTTCGAAAAACGTAGCGACCCGATACCGTCTAACACTGTCATCATTAAAGGTTCTGGGGCTGAATTGCCCGAAGCGTTGCAAGGTTTAACCGCCACTAACGTTGACGATATGTTCGCCGATATTAGTTGGACAGCGCCAACAGGAAATAATGCCGACTTTGTTCAATTAATGTGGGCAGATAAAGGCGAACCGACGAACGCAATCGAACTTGCTGTTATCCCTATGCCGTCCACGACTACGCGAGTACAGCGGAACTTACAGAACGGTTATTATTTCGCTCGATTCATGTCTAAAGCAGGCTTGTTCGGCGACTGGGGTTTCGTGTACGCTACTGGTCGACCTGCTACGGGTGTGCTTTTACAATCACTTTCACTTAGTCAATATGACGGCGATTTAGTCGGCGGTATCTGGTATAATCCGACGCTTGCTGTCAGTAAGTCGCAACGCTTGGCGTCCGAACTTGGTTGGGAAGTCTTCGACATGATGGTTCCCGAACCTTTCGGCGAAATTGATTACTTTGCTAAAAATGCGACTTATGTTGCTTCGGCGCATACGTTAAGGATTTCGGGTTCTGTCGGTTGGCATCGTGCGCCAAACATTCCGAACACTTTGCCGCGTATCGACGCTGTTGCACAGCTTGCATATTTTGACGAAACGGAGTATCGCGGCGGCGTTGTGTTACTGCCTAAAGATGCGAATATTAAAGTCGGATTTAAAGCCCCACATTCAGAACCGCAAGGCGTTGTCGTGAGTGGTTTCATTGGTACAATTGAGGATTTAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ab6c930d71971322d1456c8eb4aae840b700b27865fc605f20aa1de62d0003b3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7352
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Clinical experience of personalized bacteriophage therapy in a case of hospital-acquired pneumonia with carbapenem-resistant Acinetobacter baumannii Tan,X. and Ma,Y. 2021-02-26 — GenBank