Protein

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Genbank accession
YP_009823566.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPRLIFKNNFEVALAQPTTTSDTTITIRSGSGFPTLGANERVVATIVDAATGLQFEIVTVTAVVGNVLTVQRAQEGTAARAWAAGDMLSIRTTAATLTNTVRNFGEIPNGINLNALTGSWFGQYHQSANAGASTALNYPVAQAGILEVYKTGVAGESCVQRYTPYWINAIYQRLYNAGSSLWSDWVQMYSTQSTIPVANGGTGQTTIQGMKSAFGFGTVADQNIVPTSMGGTGSADNAQAWLNIRPQGSTPLAGDPVNDYDAATKRWVENLVNTGTVGPSMNGVMNYGVGDFHLRNSRSYIQPYEVVADGQLLNRADWPELWAYAQMLSPIADADWLADKFKRAKYSLGNGTTTFRVPDLNGVQTGSVRALYGRGDGGNSTANGQIFESAAPNITGSAAGVSAGTYAQIFGTAVRGAFYTNNDLYPQGAGDTIPVGSGAVEGRLNTINIDASRSSPIYGAATDEIMGRNFVGVWVIRASGGFVAANTQWSVINADSSAPAVDTVVIGGKVESKYSNPSLSQFARLYSSSLWGSSNAAVIESEGASKHAYKFYEDGTVDFRQSGKTNPFRMYTPLGTWNGITDANPSTLTTNGMDRVAISSGSDLLVRGYSIGGTRPNGYPTKVGYHMYIPGNDAFGIACVVIGGDNGKFCRYFFDIDGQIYGSTDYGNFSYTKNGTSDSRVKHGIAPVGVEKSYSNIQGLEFVEFIYDNDEQNRVRHGVIAQQAEVVEPLYVKTRKYVGSDPGEIVEQKELDTTPMLLDTMHVVQELMKKVESLEAEIVALKAAK
Physico‐chemical
properties
protein length:785 AA
molecular weight: 83936,50280 Da
isoelectric point:5,34101
aromaticity:0,09809
hydropathy:-0,20382

Domains

Domains [InterPro]
DC_0085
STR
1–785
DC_0085
cd19958
STR
105–189
cd19958 SSF88874 IPR030392
IPR030392
CHP
677–729
IPR030392 Coil
YP_009823566.1
1 785
Architecture
STR
STR 1-785
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009823566.1
1 785
Domain Start End Length (AA) Confidence
N-terminal 1 217 217 0,8865
Central domain 218 416 200 0,0516
C-terminal 417 785 368 0,8721
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-217
Central
218-416
C-terminal
417-785

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_WFC
[NCBI] 		2508193 Uroviricota > Caudoviricetes > Lindbergviridae > Wifcevirus WFC >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009823566.1 [NCBI]
Genbank nucleotide accession
NC_048195 [NCBI]
CDS location
range 5572 -> 7929
strand -
CDS
ATGCCAAGGCTAATATTCAAAAACAACTTTGAGGTCGCACTGGCTCAGCCAACCACGACTTCAGACACCACCATCACAATTCGTTCAGGGTCGGGCTTTCCGACCTTGGGCGCAAACGAGCGCGTAGTGGCGACAATCGTCGACGCTGCAACAGGCTTACAATTCGAAATCGTCACCGTAACAGCCGTGGTCGGAAACGTCCTTACCGTGCAGCGTGCACAGGAAGGAACTGCAGCGCGCGCATGGGCGGCTGGCGACATGCTTTCCATTCGAACTACTGCTGCAACCTTGACCAACACCGTGCGTAATTTTGGAGAAATTCCTAACGGAATAAATCTCAATGCGCTTACTGGAAGTTGGTTCGGGCAATATCACCAATCAGCCAATGCTGGGGCATCGACAGCCTTGAATTATCCAGTTGCGCAAGCCGGGATTCTTGAAGTTTATAAAACTGGCGTTGCAGGAGAAAGTTGCGTTCAAAGATACACCCCTTATTGGATTAATGCCATATACCAAAGGTTATATAATGCCGGATCATCATTATGGTCGGACTGGGTGCAAATGTACAGTACGCAAAGCACCATCCCAGTGGCAAATGGTGGCACAGGCCAAACAACCATTCAGGGCATGAAGTCTGCTTTTGGATTCGGAACGGTTGCTGATCAAAATATTGTCCCTACTTCTATGGGCGGTACTGGCTCTGCTGACAATGCTCAGGCGTGGCTTAACATCCGACCACAAGGCTCAACGCCGCTGGCTGGTGACCCAGTAAATGATTATGATGCCGCAACAAAGCGTTGGGTGGAAAACTTAGTCAACACTGGCACTGTCGGCCCAAGCATGAACGGTGTTATGAACTATGGCGTAGGTGATTTTCACCTTCGAAATAGTCGCTCATACATCCAGCCGTATGAAGTCGTTGCAGACGGTCAACTATTAAACCGTGCCGATTGGCCTGAACTTTGGGCATATGCACAAATGCTTTCTCCCATCGCAGATGCTGATTGGCTTGCTGATAAGTTCAAACGTGCAAAGTATTCTTTGGGCAACGGCACAACCACTTTCCGTGTACCAGACCTGAACGGTGTGCAAACAGGTTCTGTACGGGCGCTGTACGGGCGTGGCGACGGCGGCAACTCGACTGCGAACGGCCAAATATTTGAATCCGCTGCACCAAACATAACAGGTTCAGCTGCAGGCGTATCGGCAGGTACTTATGCGCAAATCTTTGGCACAGCCGTCCGAGGTGCTTTTTACACAAACAACGATTTGTATCCTCAAGGCGCTGGAGACACAATCCCCGTTGGAAGTGGCGCAGTAGAGGGACGTTTAAATACAATCAACATTGATGCATCACGCTCAAGTCCAATCTATGGCGCGGCAACAGATGAAATCATGGGCCGTAACTTCGTTGGCGTTTGGGTGATTCGTGCATCGGGTGGATTTGTTGCCGCAAATACGCAGTGGAGTGTGATAAACGCAGATTCAAGCGCGCCAGCAGTAGATACTGTGGTTATCGGCGGCAAAGTAGAGTCAAAATACAGCAACCCATCACTATCACAATTTGCACGTCTGTACTCAAGTTCTTTATGGGGTTCTTCTAACGCCGCCGTCATAGAGTCAGAAGGCGCTTCAAAACACGCTTATAAATTCTATGAGGATGGCACAGTTGACTTCCGACAGTCAGGGAAGACCAACCCATTCCGCATGTATACGCCTTTAGGCACATGGAATGGAATAACTGACGCCAATCCATCAACCTTGACAACTAACGGAATGGACAGGGTGGCCATTTCGAGCGGCTCAGATCTTCTGGTGCGCGGATATTCTATCGGCGGCACCAGACCTAATGGATACCCAACAAAGGTTGGATATCACATGTATATTCCAGGTAATGACGCATTTGGCATAGCCTGTGTAGTTATCGGTGGAGACAATGGAAAATTCTGCCGTTACTTTTTTGACATTGATGGTCAAATATATGGATCAACGGATTATGGAAACTTCAGCTATACGAAAAATGGAACTTCTGACTCACGTGTAAAACACGGCATCGCTCCTGTTGGCGTTGAAAAGTCATACTCTAATATCCAAGGTCTGGAATTTGTAGAGTTCATTTATGACAATGACGAACAAAATCGAGTTCGGCATGGCGTGATTGCACAGCAAGCAGAGGTTGTTGAGCCTTTATATGTTAAGACGCGTAAATATGTTGGCAGTGATCCAGGAGAGATTGTTGAACAAAAGGAACTTGACACAACGCCTATGCTTTTGGATACTATGCACGTGGTGCAGGAGTTGATGAAAAAAGTTGAATCCCTAGAGGCAGAGATAGTCGCGCTGAAAGCAGCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
491c51e4694e51845e7fb7c9042f3b84de6e2e9c979bc736db4a1cb17d02ddc7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3142
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank