Protein

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Genbank accession
YP_010581792.1 [GenBank]
Protein name
structural protein PB1
RBP type
TSP
Evidence DepoScope
Probability 0,94
Protein sequence
MTYEHGIDSTYGEALADLRDKVGGMTNWSIVDDPGGGGTSLGDQGGGQSEFFVLQAPNGEQVRIGYAGMTPGDQTTGDYDNNWGIVVEHGLDWDPTGGDTSDTDNWNDGQWIDRYGSDPAQNLTDGTDNYGDTGKTEAIAPHVDPRDINTTDSVTYSLHYGDSTGFAIFLSRNVGDGNDASMALGMAQLNTFFNYNATSSRESEHALLLHGNSRSDDKGTDHVCEWNWMSAGGGTCDGRSENVDAHGTTTAYGMPNGHPDYGDYPSVDENVVATPKWTRNRSGQDYGTVIGTHEVWMMDLAGSSNGDTLQDSNANDKFRINNTNGSIEHYLTNKSVGLGLLMQ
Physico‐chemical
properties
protein length:343 AA
molecular weight: 36885,95570 Da
isoelectric point:4,21662
aromaticity:0,08746
hydropathy:-0,75248

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010581792.1
1 343
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0013
Central domain 11 209 200 0,0031
C-terminal 210 343 133 0,9953
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-343

Taxonomy

  Name Taxonomy ID Lineage
Phage Saline Natrinema sp. J7-1 virus 1
[NCBI] 		2847285 Viruses > Singelaviria > Helvetiavirae > Dividoviricota > Laserviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010581792.1 [NCBI]
Genbank nucleotide accession
NC_003158 [NCBI]
CDS location
range 1 -> 1032
strand +
CDS
ATGACCTACGAACACGGAATCGACTCGACCTACGGTGAGGCGCTCGCCGACCTCCGCGATAAGGTCGGCGGAATGACCAACTGGAGCATCGTCGACGATCCCGGCGGCGGCGGGACCTCGCTTGGCGATCAGGGCGGCGGTCAGTCAGAGTTTTTCGTTCTGCAAGCCCCGAATGGCGAGCAAGTCCGCATTGGTTATGCGGGGATGACTCCCGGAGACCAGACGACCGGAGACTACGACAACAACTGGGGGATCGTCGTCGAGCACGGCCTCGACTGGGACCCGACTGGTGGTGATACGAGCGACACCGACAACTGGAACGACGGGCAGTGGATCGATCGGTACGGCTCCGATCCGGCCCAAAACCTCACCGACGGGACCGATAACTACGGCGACACCGGAAAGACCGAGGCAATCGCCCCGCATGTCGACCCCCGCGACATCAATACGACCGATTCCGTAACCTACTCGCTTCACTATGGCGATTCGACCGGCTTCGCAATCTTCCTCAGCCGGAACGTCGGGGACGGAAATGACGCCTCGATGGCACTCGGAATGGCTCAACTGAACACGTTCTTCAACTACAACGCAACGTCGTCGAGAGAAAGCGAGCACGCCTTGCTCCTCCACGGAAACTCACGCAGCGACGACAAGGGGACAGATCACGTATGTGAGTGGAACTGGATGAGCGCGGGCGGCGGCACCTGTGACGGCAGAAGCGAAAACGTCGACGCTCACGGAACGACGACCGCCTACGGGATGCCGAACGGTCACCCCGATTACGGCGACTACCCCAGCGTCGACGAAAACGTCGTCGCGACTCCGAAATGGACGCGCAACCGGTCCGGACAGGACTACGGAACGGTGATCGGCACTCATGAGGTCTGGATGATGGACCTCGCCGGGAGCAGCAACGGCGATACGCTGCAGGACAGTAACGCAAACGACAAATTCCGGATCAATAACACCAACGGGTCGATCGAGCACTATCTCACGAACAAATCCGTCGGTCTGGGTCTGCTCATGCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eed779753b2bb740bb47e08850dfbeca1036d4abbeaacb849cb97ddb01d6d722
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4781
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50