Protein

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Genbank accession
YP_009786278.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MALDNFNELTKNNNVKDMTDAINSIGLELSKPRNVFELVSDLQVQVKNTQLKAITTDKGLSKVPTGTRILDVKEVGVYYYSASTLATKTDKPEMNSQDTVLVVTPTNDASVVVQTIYPLTVSGNAIQQAYRVVIGNTAGDWVYLKGLVGGNTNSISGVNLDTFSTPGEYFISGSTGLPEGETEGLLKVYRGTNNKIVQEFISSLTKSKYFKITSISTGWIKELEPKTLSKYTLGGINDEGQGTFGLLIYISDNKTFQQAITDHIAKTGQPTFTFYVQGGVTGNPLGGLSGRGIFVCESTSESALSNNLYGVYHVISTLGTLITGSVIGGDWRIPKGSDSTTTLWTGVKEFTSKTTETMNYSSNDFDYFKVYVTIGGTNSNSIYRQGFEFGKHSANKYKVSSVNVPSSGTTLEYFMCSISFNGNKFTIDEYNTKTNGKCYVTEIVGIKRPI
Physico‐chemical
properties
protein length:450 AA
molecular weight: 48944,44300 Da
isoelectric point:6,84798
aromaticity:0,10000
hydropathy:-0,23133

Domains

Domains [InterPro]
DC_1773
STR
8–238
DC_1773 IPR057110
cd19958
STR
151–210
cd19958
DC_0448
STR
194–448
DC_0448
YP_009786278.1
1 450
Architecture
STR
STR 8-448 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009786278.1
1 450
Domain Start End Length (AA) Confidence
N-terminal 1 326 326 0,6224
Central domain 327 439 114 0,0119
C-terminal 440 450 10 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-326
Central
327-439
C-terminal
440-450

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SscM-1
[NCBI] 		1868844 Uroviricota > Caudoviricetes > Herelleviridae > Sciuriunavirus > Sciuriunavirus SscM1
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009786278.1 [NCBI]
Genbank nucleotide accession
NC_047767 [NCBI]
CDS location
range 87182 -> 88534
strand +
CDS
ATGGCTCTTGACAACTTTAATGAATTAACTAAAAATAATAATGTTAAAGACATGACAGATGCAATTAATAGTATAGGTTTGGAACTATCTAAACCTAGAAATGTATTTGAATTAGTATCTGATTTACAAGTACAAGTTAAAAATACACAACTAAAAGCTATTACTACAGATAAGGGATTAAGTAAAGTACCTACAGGAACAAGAATTTTAGATGTAAAAGAGGTAGGTGTTTACTACTATAGTGCTAGTACTTTAGCTACAAAGACAGATAAACCAGAGATGAACTCTCAAGATACTGTACTAGTTGTTACACCAACAAATGATGCATCTGTAGTAGTACAGACTATATACCCTTTAACTGTAAGTGGTAATGCTATTCAACAAGCCTATAGGGTTGTTATAGGTAATACAGCAGGAGATTGGGTTTATCTTAAAGGTTTAGTAGGAGGAAACACAAATTCTATAAGTGGAGTAAACCTAGATACTTTCTCTACCCCTGGAGAATATTTTATTTCCGGCTCAACAGGACTACCAGAAGGAGAGACAGAAGGACTACTAAAAGTATACAGAGGTACTAATAATAAAATTGTACAAGAATTCATATCTAGCTTAACAAAAAGTAAATATTTCAAAATAACAAGCATTTCAACAGGATGGATAAAAGAATTAGAACCTAAAACTTTAAGTAAATACACATTAGGTGGAATTAACGATGAAGGTCAAGGAACTTTTGGTTTACTAATATATATAAGTGATAACAAAACATTTCAACAAGCTATAACAGACCATATAGCAAAAACAGGACAACCTACATTTACATTTTATGTACAAGGTGGTGTTACAGGAAACCCACTAGGGGGTTTAAGTGGTAGAGGTATATTTGTATGTGAGTCTACTAGTGAAAGTGCACTAAGTAATAACTTATATGGTGTGTACCATGTAATATCTACACTAGGTACATTAATTACCGGTTCTGTTATTGGTGGAGACTGGCGTATACCTAAGGGTTCAGATTCTACAACTACTTTATGGACTGGTGTTAAAGAGTTCACAAGTAAAACAACGGAAACTATGAACTATAGCTCTAATGACTTTGATTACTTTAAGGTATATGTTACTATAGGAGGAACTAATAGTAACTCTATCTATAGACAAGGGTTTGAATTTGGTAAGCATAGTGCTAACAAATATAAGGTATCAAGTGTAAATGTACCTTCAAGTGGAACTACGTTAGAGTACTTTATGTGTTCAATATCATTTAATGGTAATAAATTTACAATTGATGAATATAATACTAAAACTAATGGTAAGTGTTACGTAACGGAGATAGTAGGTATAAAGAGACCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eae7aba7bc9abd547f21c11438480991bf5307d530dd97d724bdb76f40e94f56
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7787
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50