Protein

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Genbank accession
YP_009804101.1 [GenBank]
Protein name
major tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,72
Protein sequence
MHLPNGAQIFVETSRGEEIEATAVTNAKNPVATVASKGDLAKGDYVIVTQSTWAKMVSRVLIVTDAQETSITLAGIDTTDALVFPAGGTMSFAKITGWTEIPCVQEIGQDGGEQQYYTYQCLSDDKEQQIPTFKSAISLTYTFAHEFDNPIYPILRKLDSSGQVTAVRMYVPKANEMRMWAGILSFNDIPSTQVNEMETVQLAVSLKGDFTFVSSALASPGA
Physico‐chemical
properties
protein length:222 AA
molecular weight: 24076,94410 Da
isoelectric point:4,60199
aromaticity:0,08559
hydropathy:-0,05676

Domains

Domains [InterPro]
DC_0037
ATT
1–50
DC_0037 IPR014918
YP_009804101.1
1 222
Architecture
ATT
TAS
ATT 1-50 | TAS 51-214 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Sfin-1
[NCBI] 		2024314 Uroviricota > Caudoviricetes > Drexlerviridae > Tunavirus > Tunavirus Sfin1
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009804101.1 [NCBI]
Genbank nucleotide accession
NC_047998 [NCBI]
CDS location
range 46631 -> 47299
strand -
CDS
ATGCACTTACCAAATGGCGCGCAAATTTTCGTGGAAACCTCTCGCGGAGAAGAGATCGAGGCGACCGCTGTCACTAACGCAAAAAATCCTGTTGCTACGGTTGCATCTAAGGGCGACTTGGCGAAAGGTGATTACGTTATTGTAACTCAGTCAACTTGGGCTAAGATGGTTAGTCGAGTACTAATTGTTACTGACGCCCAAGAAACAAGCATTACTCTTGCTGGGATTGACACTACTGATGCTCTTGTTTTCCCGGCTGGCGGTACAATGAGCTTTGCAAAAATTACTGGCTGGACTGAGATCCCTTGCGTACAGGAGATTGGTCAGGACGGCGGCGAGCAGCAGTATTACACTTATCAGTGTTTGTCTGACGATAAAGAGCAGCAGATCCCGACGTTTAAGTCTGCAATCTCGCTAACGTACACCTTCGCGCACGAATTTGATAACCCTATCTATCCTATTCTGCGTAAGCTGGATTCTTCTGGTCAGGTAACTGCGGTTCGGATGTATGTTCCAAAAGCGAACGAGATGCGCATGTGGGCTGGTATCTTGTCTTTTAACGACATTCCATCTACGCAAGTAAACGAAATGGAAACGGTACAACTCGCCGTATCCCTGAAGGGTGATTTCACTTTCGTTTCATCCGCTCTGGCATCACCTGGTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ad7bd563821b3f6e2501eee0f23fbd6e587f6f6660d47631620f565762f9372c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9588
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel bacteriophage with broad spectrum lytic activity against Shigella sp. and E.coliC Tousif,A.S.K. and Nabanita,G. 2023-11-29 — GenBank