Protein

View in Explore
Genbank accession
WLW38447.1 [GenBank]
Protein name
baseplate hub protein
RBP type
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MTTLLLHKDAFRPSASTEKKSLRAGVRISTLLRQEMYISGRGKSLTRRVPFVVVRNGQPVLQAQWSGRIKKGDNLSIVHLPKGGGGGSNPMQIVMTVAIAVAAAYTGGAVGAAYGVGWGAAASAAVMIGGTLLLNMFFPPETPSPMDMNREKASPTYSLTAQGNTARLLEAIPVLYGRFRTFPDLASSPYSETVGNEQYLYQLFCITQGSMEIEKLQVDKDDFATYGEIQYQVVNPGEKVTLFPDNVITSIAVSGQEMTAQQMFGPFAVSAPGVEVNHIAVDLSWPGGAYYMNDQGKFNSSTVQVQFEYQKIDDNGNALGQWEILVEKGYTFSTSTPQSVTEKVAVALGRYQVRGIRTTPANSDNKEQNKTTWTALRGYAQSHHDYGDVTLLAVIMKATNNLNQSTSRQINVIGTRKLPVWDPVNGWSLTPQPTKNPAWAAADILRNPTYGRRLPTSRINIQELYRLSQVYDSRGDEFNGVFDSTSQLWDALSKVLRVGRTVPVNYAGLVDFVRNEPKTVPTFIFQPQNMVENTFSTDYMFVDTNSTPNYVQIEYTDGNTWDVATVDCILPGTAPTVPSKVSMMGITNRAQAWREGMSMAASNRDQRRMISFTTGREGYLPRYGDLVQISHDVPQWGQSGEVLGFNPGPDDPEWGLHGELVSNEPFEFAEGSNHAIVFKKRDGSPHGPFTVVPHPDGDAKKVIVQGTSAALEEIYISDGFREELTQYQFGPTERRGIRAIALSSTPDSSGRVALTFTNYADSVHSAENGGVVPPPGPESGLPGMNPVPIVSSVTVELTPFAWQQNIVATPARGATSYEFEISQDGVSWSNLGIQSTSSMQVNLPGGVWFVRVRGIGVAIGPWASWTGMIEASALPVSQIDHVSITSQVFGINLEWAVREDDFLAESVEIYWGTTNILGNASKLIQLPLPANKFAVTDLGPGQKRYFWFRVIDEAGRVGPWYNAGVGLLGSSSDQADIIMEYLDGKITETQLAQALIAKIESGGGAAVEVEAIQNALAAMYTIKTQLTAGGRTALAGIGVGVENNEGVLESQVLVLADRFAVGRSDDETGTFKSMFIIDNGNVYMDTAFIKNGTITNLMIGDIIQSNDFVSGVSGWRLHKGAQGLEMNGTGNGYRVRLTNTGLYVWNTNTGVLCVEVGLLT
Physico‐chemical
properties
protein length:1160 AA
molecular weight: 126004,49230 Da
isoelectric point:5,25371
aromaticity:0,09052
hydropathy:-0,18302

Domains

Domains [InterPro]
DC_0129
STR
1–1098
DC_0129
NF040662
Unmapped
273–764
NF040662 IPR015406
IPR055385
ATT
274–379
IPR055385 IPR032876 IPR053171
WLW38447.1
1 1160
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 1-273 | ATT 274-379 | STR 380-486 | ATT 487-634 | STR 635-1098 | RBD 1099-1130 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WLW38447.1
1 1160
Domain Start End Length (AA) Confidence
N-terminal 1 641 641 0,8096
Central domain 642 1104 464 0,0564
C-terminal 1105 1160 55 0,7545
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-641
Central
642-1104
C-terminal
1105-1160

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage JWT
[NCBI] 		3070119 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Achromobacter xylosoxidans
[NCBI] 		85698 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WLW38447.1 [NCBI]
Genbank nucleotide accession
OQ938574 [NCBI]
CDS location
range 18800 -> 22282
strand +
CDS
ATGACGACGCTCCTGCTGCATAAGGACGCCTTCCGCCCCTCGGCAAGCACAGAAAAGAAGAGCTTGCGAGCTGGGGTGCGTATCAGCACCTTGCTCCGGCAAGAGATGTATATCTCTGGCCGAGGCAAGTCCCTCACCCGCCGAGTGCCGTTTGTCGTGGTTCGGAATGGTCAGCCTGTGCTTCAAGCTCAATGGTCGGGCCGAATCAAGAAGGGGGACAACCTGTCGATCGTGCACTTGCCTAAGGGCGGTGGCGGTGGCAGTAACCCCATGCAGATCGTCATGACCGTGGCCATCGCTGTCGCCGCCGCCTATACGGGTGGCGCTGTTGGTGCAGCATACGGGGTTGGCTGGGGCGCTGCGGCTTCCGCTGCCGTCATGATTGGTGGCACCCTGCTCTTGAACATGTTCTTCCCGCCGGAGACGCCGTCGCCGATGGATATGAACAGGGAAAAGGCAAGCCCCACCTATTCCTTGACAGCACAGGGCAATACCGCGCGGCTGCTCGAGGCCATACCAGTGTTGTATGGCCGCTTTCGCACGTTCCCAGACTTGGCATCGTCGCCGTACAGCGAGACTGTTGGCAATGAGCAGTACTTGTACCAGCTCTTCTGCATCACGCAGGGCAGCATGGAAATTGAGAAGCTCCAAGTCGATAAGGACGACTTCGCCACGTATGGTGAGATTCAGTACCAGGTTGTGAATCCTGGTGAGAAGGTCACTCTGTTCCCAGACAATGTTATCACCAGCATTGCAGTCAGTGGCCAAGAGATGACCGCCCAACAAATGTTTGGTCCTTTTGCGGTCAGTGCACCCGGCGTTGAAGTCAACCACATTGCTGTCGACTTGTCGTGGCCGGGTGGTGCCTATTACATGAATGACCAGGGCAAGTTCAACTCGTCCACGGTCCAAGTGCAGTTTGAGTACCAGAAGATCGACGATAACGGGAACGCTCTCGGCCAATGGGAAATCCTCGTTGAGAAGGGCTATACCTTCTCGACCAGCACGCCCCAAAGTGTCACGGAAAAAGTTGCCGTGGCTCTCGGTCGCTACCAGGTGCGAGGCATCCGTACTACGCCGGCAAACTCGGATAACAAGGAGCAGAACAAGACAACTTGGACTGCTCTGCGTGGCTATGCCCAGTCACATCATGACTATGGTGACGTCACTTTGCTCGCGGTCATTATGAAGGCCACTAACAACCTGAACCAATCGACGTCGCGCCAGATCAACGTCATAGGTACGCGCAAGCTGCCAGTTTGGGACCCAGTCAACGGCTGGTCGCTGACCCCTCAGCCTACCAAAAACCCTGCTTGGGCTGCCGCGGATATTCTGCGTAACCCAACGTACGGTCGTCGGCTGCCGACGTCGCGTATCAACATCCAAGAGCTGTACCGCCTGTCACAGGTGTACGATTCGCGCGGTGACGAGTTCAACGGGGTCTTTGACTCCACGAGCCAATTGTGGGATGCACTGTCGAAGGTGTTGCGCGTGGGTCGGACTGTACCAGTCAACTACGCGGGCCTTGTCGACTTCGTACGCAACGAGCCCAAGACAGTGCCTACGTTCATCTTCCAGCCGCAGAACATGGTGGAGAACACGTTCAGCACTGATTACATGTTCGTGGATACCAATTCGACGCCCAACTATGTGCAGATCGAGTACACCGATGGCAATACGTGGGACGTGGCCACTGTGGACTGCATCCTGCCTGGTACTGCCCCGACTGTGCCGTCCAAAGTATCCATGATGGGTATTACCAATCGCGCGCAGGCTTGGCGCGAAGGCATGTCCATGGCCGCTTCCAACCGCGATCAGCGCCGGATGATTTCCTTCACGACTGGTCGCGAAGGGTATCTGCCACGCTATGGCGACCTGGTACAAATCTCACACGATGTTCCACAATGGGGCCAGTCAGGTGAAGTGCTGGGCTTTAACCCTGGTCCTGACGATCCTGAATGGGGTCTGCATGGCGAGCTGGTGTCCAATGAGCCCTTTGAGTTTGCAGAAGGGTCGAACCACGCCATAGTCTTCAAGAAGCGGGACGGATCGCCTCATGGGCCCTTTACGGTTGTGCCACATCCAGATGGCGATGCCAAGAAGGTTATCGTGCAGGGCACGTCTGCTGCTCTTGAGGAGATATACATTTCGGACGGTTTTCGTGAAGAGCTGACGCAGTATCAGTTCGGTCCTACCGAACGTCGTGGCATACGCGCAATCGCGTTGTCGTCTACTCCGGATTCGTCCGGTCGCGTCGCACTCACCTTCACGAACTACGCGGACAGTGTGCACTCCGCAGAAAACGGGGGCGTGGTGCCACCACCAGGGCCAGAATCTGGTTTGCCAGGCATGAACCCAGTGCCAATTGTCAGCTCCGTCACGGTTGAGCTGACGCCCTTTGCATGGCAGCAGAACATTGTGGCAACGCCAGCTCGTGGGGCTACGTCCTATGAGTTTGAGATCAGCCAGGACGGTGTCAGCTGGTCCAATTTGGGCATTCAATCGACCAGCTCTATGCAGGTTAACCTGCCTGGTGGTGTTTGGTTTGTCCGAGTGCGTGGTATCGGCGTAGCGATCGGTCCTTGGGCTTCTTGGACGGGCATGATCGAGGCATCGGCGCTGCCAGTGTCCCAGATCGACCACGTTAGCATCACTTCGCAGGTTTTTGGTATCAACCTCGAGTGGGCTGTGCGTGAAGACGACTTCCTGGCCGAGTCCGTGGAAATTTACTGGGGCACAACGAACATTCTGGGCAATGCTTCTAAGCTAATCCAGTTGCCGTTGCCAGCCAATAAGTTCGCTGTAACAGACCTCGGGCCGGGCCAGAAGCGGTATTTCTGGTTCCGGGTTATCGACGAAGCCGGCCGTGTTGGTCCTTGGTATAACGCCGGTGTCGGTTTGCTGGGCTCTTCGAGCGATCAGGCCGATATCATCATGGAGTACCTTGATGGTAAAATAACGGAAACGCAGCTCGCGCAAGCCCTCATTGCCAAGATCGAATCTGGGGGCGGTGCCGCCGTCGAGGTTGAGGCAATTCAGAACGCCTTGGCTGCAATGTATACCATCAAGACCCAGCTCACCGCAGGTGGCCGCACGGCTCTCGCCGGTATTGGTGTCGGGGTGGAAAACAACGAAGGCGTGCTCGAGTCCCAAGTCCTCGTTTTGGCAGACCGTTTTGCGGTGGGTCGTTCTGACGATGAGACTGGCACCTTCAAATCTATGTTCATCATTGACAATGGCAATGTGTACATGGATACGGCCTTCATCAAGAATGGCACTATTACCAACTTGATGATTGGCGATATCATCCAGTCCAATGACTTCGTGTCGGGTGTGTCTGGCTGGCGTCTCCACAAGGGCGCTCAAGGGCTCGAGATGAACGGCACCGGCAACGGGTACCGCGTCCGACTAACCAACACCGGCTTGTATGTGTGGAACACCAACACCGGTGTACTTTGCGTAGAAGTGGGGCTTTTGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f8a18a26169668b60969539b1b55e479a571199981f5e81d1b0531378cfe2e0e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2846
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50