Protein

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Genbank accession
YP_009217948.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,97
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MEQFYTLLTDIGKAKIANATALQTKVNFTKLLVGDSGGSYYEPTETQTKLKNKVWEGGIGNISVDKDNPNWIVLESVIPSSVGGFTIRELGIEDEKGDLVVVAKYPATYKPQIADGSTKDLTIKTILEVGNTSSVTLKVDPTIVLATKKDIEVLENKIENIKVPVTSVNSKTGEVELKAQDIKTSHEKSIEQELTDTRTVLLNLTTNKLDEGIFNDFKEDTEQRLDAIYRKSTNTINLYIDGVNGSDSNNGLSKLKPLKTLKASFNKIPRFYSKVEIEVIGDIELTNNEFLSNKFGDSNKITIYSSNGSCIKSSKKLDFFLDNITWIIIKDIIIDTVEMTARFGTYCDISNVTLKNQTVAFNAIYNSGIKATKCKFENVDNICILSKYGSRIHSVDNEGSAGYGLIAREGGVISKEGTQPTGTTANEYTTNGGVIR
Physico‐chemical
properties
protein length:436 AA
molecular weight: 47943,69120 Da
isoelectric point:5,48317
aromaticity:0,07110
hydropathy:-0,31445

Domains

Domains [InterPro]
IPR022225
ATT
1–149
IPR022225
DC_1371
STR
1–396
DC_1371
IPR051934
Unmapped
2–216
IPR051934
YP_009217948.1
1 436
Architecture
ATT
STR
ATT 1-149 | STR 150-396 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009217948.1
1 436
Domain Start End Length (AA) Confidence
N-terminal 1 269 269 0,9825
Central domain 270 425 157 0,9125
C-terminal 426 436 10 0,7718
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-269
Central
270-425
C-terminal
426-436

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCT453B
[NCBI] 		1567013 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium tetani
[NCBI] 		1513 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009217948.1 [NCBI]
Genbank nucleotide accession
NC_029004.1 [NCBI]
CDS location
range 30679 -> 31989
strand +
CDS
ATGGAACAATTTTATACATTACTAACAGACATAGGTAAAGCAAAAATTGCTAATGCCACTGCATTGCAAACTAAAGTTAATTTTACTAAGCTTCTAGTTGGAGATAGTGGCGGTAGTTATTACGAGCCAACCGAAACTCAAACAAAGCTTAAAAATAAAGTTTGGGAGGGTGGCATAGGCAATATATCTGTAGATAAAGATAATCCTAATTGGATAGTTTTAGAAAGTGTTATACCTAGTTCCGTTGGAGGATTTACCATAAGAGAATTGGGTATAGAAGATGAAAAAGGAGATTTAGTTGTAGTAGCGAAATACCCAGCCACATATAAACCACAAATTGCAGATGGAAGTACTAAAGATTTAACAATTAAAACTATATTAGAGGTCGGCAATACATCTAGTGTAACTCTAAAAGTAGATCCTACTATTGTTCTTGCTACTAAAAAAGATATAGAAGTGTTGGAAAATAAAATAGAAAATATTAAGGTGCCAGTAACCTCTGTTAATTCTAAAACTGGAGAAGTAGAGCTTAAAGCACAGGATATAAAAACTAGCCATGAAAAATCTATAGAACAAGAATTGACAGATACTAGAACAGTATTACTAAACTTAACTACTAACAAATTAGATGAAGGCATTTTTAATGATTTTAAAGAGGATACTGAACAAAGACTAGATGCGATTTATAGAAAAAGCACAAACACTATTAATTTATATATAGATGGCGTTAATGGCAGTGATAGTAACAATGGGTTAAGTAAATTAAAGCCACTAAAAACATTAAAAGCTTCTTTTAATAAGATACCAAGGTTTTACAGTAAAGTAGAGATAGAAGTAATAGGAGATATAGAACTAACAAATAATGAATTTTTAAGTAATAAGTTTGGAGACTCAAATAAAATAACTATATATAGTTCCAATGGAAGTTGTATTAAAAGTAGTAAAAAATTAGACTTTTTCCTGGATAACATAACTTGGATTATTATAAAAGATATTATCATAGATACCGTAGAGATGACTGCTAGATTCGGGACGTATTGCGATATATCAAATGTTACTTTAAAGAATCAAACGGTAGCATTTAATGCCATTTATAACAGTGGCATTAAAGCTACCAAATGCAAATTTGAGAATGTGGATAATATTTGTATACTATCTAAATATGGAAGCCGTATACATTCTGTGGATAATGAGGGGTCGGCCGGATATGGATTAATAGCTAGAGAAGGCGGAGTAATAAGTAAAGAGGGAACTCAACCGACGGGCACAACTGCTAACGAATATACTACAAATGGAGGTGTTATAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9593ba7711d9420423002aa991b81f122c7d8621263a67fcc5d9900cea8703cd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8733
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity of Clostridium tetani strains Cohen,J.E., Wang,R., Shen,R. and Keller,J.E. 2017-08-11 — GenBank