Protein

View in Explore
Genbank accession
YP_003090195.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MKKIYAESGPKRISGAKGGGGGGGGGGESPDSLHSAARAKVLDAISEGPIVGLVKGMQSVFLDGTPIQNSDGSVNFQSYSVDVRTGTLDQEFMPGFPAVERESAVGVPLTSDAPWVRQVQNTQLSAVRIRFGLPALQKSDPATGVFGYRVEYAIDLSVDGGSYAQVLSSAFDGKTTSLYERSHRIELPRATTGWLARVRRITPNAHSSLIADTVNIEAITEVIDRKLRYPMTALVGMTFDARSFSQVPVRSYHVRGLIIRVPSNYDPETRTYSGAWDGTFKPAWTNNPAWIFYDLLLNDRYGLGKTVDASMIDKWGLYEIARYCDVMVSDGRGGVEPRFTCNCVIQSAADAYKVLQDIASVFRGISYWGPGAVVASADMPSDPVYVYTAANVIDGAFRYVGSERKTRYTVALVSYNDPSNQYKQAVEYVPDDDGIARYGVIKTQVTAFGCTSQAQAHRLGRWLLLTSRYESGTVSFKVGMDGVLVGPGQVIAIADPRKAGRRIGGRIRAVAGNVVTLDKAPTVSPGDRFTAILPSGIAQYRAVKSVDGDVLTLADRFDADPVPGAVWMLENAEVAAQLYRVVSVQEGDDDGRIEYTITATMHEPGKYAAIDDGAQIQQRPVTVVPPSVQAPPTNVRVTTYSAVDQGISKTTMVIAWDAADNAVTYLPEWRKDNGDWVSVPRTGGLQVEVPGIYQGRYVARVRAQNVMGVTSLPAISAETQLKGKTTPPPAVASLKATGIVFGINLAWAFPGDGTAGDTQRTELWYSRTPSRDDAIKLSDYAYPQASTSLQGLAVGQVFYFWARLVDTSGNVGPWYPAAGPGVQGQPTTDEGEYEKYFAGRISHSALGEDLRKPIDAIPGLQQGVEDNASAIEKEIRNRADAIAKEVRDRADAVAEEARQRGAAITAEQQARQTADSSLGQRIDTVSAGVGDAAAAIKQEATARADADGALSARIDTVVSKTDGNAAAIVSEATTRANADSALGKRVDAVTADVGANKAAITAEQQARADADGALSSRIDSTTAVANANKAAIAAEQSARADGDSALSRRIDSVSAQINVPMAGDSGQAAGSTLVMAGVYSEQSARAEADMALAQRFESVTARMQSTQANLVADIRTESKARADADSAQAEQITTVRAQVNENSAAVQTVAQSYADLNGRVSASYQIKTQITSDGRTYIAGIGIGINNDSGIVESQVLVSAQRFAVVDPNNGGASIVPFVVQGGQVFLRQALIGSGWITNAMIGSYIQSDNYIAGRQGWRLDKSGWFEINSPDGAGGRTVYDNNGARTYDENGVLRVRWGRWA
Physico‐chemical
properties
protein length:1302 AA
molecular weight: 138707,10390 Da
isoelectric point:5,42548
aromaticity:0,07450
hydropathy:-0,23656

Domains

Domains [InterPro]
IPR053171
11–858
IPR053171 IPR015406
IPR055385
99–225
IPR055385 IPR032876 IPR036116
IPR013783
630–723
IPR013783
IPR003961
631–729
IPR003961
IPR003961
631–720
IPR003961
YP_003090195.1
1 1302
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage KS9
[NCBI] 		335797 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia pyrrocinia
[NCBI] 		60550 Bacteria > Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_003090195.1 [NCBI]
Genbank nucleotide accession
NC_013055 [NCBI]
CDS location
range 28981 -> 32889
strand +
CDS
GTGAAAAAGATTTACGCGGAATCCGGGCCGAAGCGGATCAGCGGGGCGAAGGGTGGAGGCGGTGGGGGTGGAGGCGGTGGGGAATCGCCAGACAGCCTGCATTCCGCCGCGCGCGCGAAGGTGCTCGACGCCATTTCGGAGGGGCCGATCGTCGGTCTGGTGAAGGGCATGCAATCGGTCTTTCTCGATGGCACGCCGATTCAGAATTCCGACGGCTCGGTCAACTTCCAGAGCTACAGTGTCGACGTCCGCACGGGCACGCTCGATCAGGAGTTCATGCCGGGCTTTCCGGCGGTCGAGCGCGAATCAGCCGTAGGTGTGCCGCTGACTTCCGATGCGCCGTGGGTGCGGCAGGTGCAAAACACGCAGCTGTCGGCGGTCCGTATTCGCTTCGGCCTGCCGGCGCTGCAAAAGAGCGATCCGGCGACCGGCGTGTTCGGCTATCGCGTGGAATATGCGATCGATCTGTCGGTCGACGGAGGCTCGTACGCACAGGTGCTGTCGTCGGCCTTCGATGGCAAGACGACGTCGCTTTACGAGCGCTCGCACCGGATCGAGTTGCCGCGCGCCACAACCGGCTGGTTGGCCCGCGTGCGCCGCATCACGCCTAACGCACACAGCTCACTGATTGCGGACACGGTGAATATCGAAGCGATCACGGAGGTGATTGACCGCAAGCTGCGGTATCCGATGACAGCGCTCGTCGGCATGACGTTTGACGCGCGATCGTTCTCGCAGGTGCCGGTGCGGTCGTACCACGTTCGCGGCCTGATCATTCGGGTGCCGTCGAACTACGATCCCGAGACGCGCACGTACTCGGGGGCATGGGACGGGACGTTCAAGCCGGCGTGGACGAACAACCCGGCGTGGATTTTCTACGACCTGCTGCTGAACGATCGCTACGGCCTCGGCAAGACGGTCGACGCGTCGATGATCGACAAGTGGGGGCTGTACGAAATTGCGCGGTATTGCGACGTCATGGTGTCGGACGGCAGAGGCGGCGTTGAACCGCGCTTCACGTGCAACTGCGTGATCCAGTCGGCCGCCGACGCGTACAAGGTGCTGCAAGATATTGCCAGCGTGTTCCGCGGCATTTCGTACTGGGGGCCGGGTGCGGTAGTCGCTTCCGCGGACATGCCTTCCGATCCGGTCTACGTTTACACCGCGGCGAACGTGATCGACGGGGCATTTCGCTACGTAGGGAGCGAGCGCAAGACGCGATACACGGTCGCGCTTGTCAGCTACAACGATCCATCGAACCAGTACAAACAGGCGGTCGAGTACGTGCCGGACGACGACGGTATTGCGCGTTACGGCGTCATCAAGACGCAGGTAACGGCGTTCGGTTGCACGTCGCAGGCGCAGGCGCACCGGCTCGGGCGATGGCTTCTCCTGACGTCGCGCTACGAGTCGGGCACGGTGTCGTTCAAGGTCGGGATGGATGGCGTGCTGGTCGGCCCGGGCCAGGTGATCGCGATCGCCGATCCGCGAAAGGCTGGTCGACGCATCGGCGGGCGCATTCGCGCGGTGGCCGGCAACGTCGTAACGCTCGACAAGGCGCCGACCGTTTCGCCCGGCGACCGCTTCACGGCGATTCTGCCGTCGGGCATCGCTCAGTACCGTGCGGTGAAGTCCGTCGATGGCGACGTGCTCACGTTGGCCGATCGCTTCGACGCGGATCCAGTGCCCGGTGCTGTGTGGATGCTGGAAAACGCGGAGGTCGCGGCGCAGCTCTATCGCGTCGTGAGCGTTCAGGAAGGCGACGACGACGGACGCATCGAGTACACGATCACGGCGACGATGCACGAGCCGGGGAAATACGCGGCAATCGACGACGGCGCACAGATTCAGCAGAGGCCGGTGACGGTCGTGCCGCCATCGGTGCAGGCGCCGCCGACCAACGTGCGCGTGACGACGTACTCGGCAGTCGATCAGGGGATTTCCAAAACGACGATGGTGATCGCGTGGGACGCCGCGGATAACGCCGTGACGTACCTGCCGGAATGGAGGAAGGACAACGGCGATTGGGTCAGTGTGCCGCGCACGGGTGGCCTGCAGGTCGAGGTGCCCGGGATTTATCAGGGGCGGTATGTGGCCCGTGTGCGCGCGCAGAACGTGATGGGCGTTACGTCGCTGCCGGCGATCAGCGCGGAAACGCAGCTGAAAGGCAAAACGACGCCGCCGCCGGCCGTTGCGTCGCTCAAGGCCACCGGCATCGTGTTCGGGATCAACCTGGCTTGGGCGTTCCCGGGCGACGGTACGGCCGGCGATACGCAGCGCACCGAGCTCTGGTATAGCCGCACGCCGAGCCGCGACGATGCAATCAAGCTGTCGGATTACGCGTATCCGCAGGCGTCGACGTCCTTGCAAGGGCTCGCGGTCGGCCAGGTGTTCTATTTCTGGGCTCGGCTCGTCGACACGTCAGGAAACGTCGGGCCGTGGTATCCGGCGGCCGGGCCGGGCGTGCAGGGGCAGCCGACAACCGACGAAGGGGAATACGAGAAGTATTTCGCGGGACGGATTTCGCACTCGGCGCTGGGCGAGGATTTGCGCAAGCCGATCGACGCAATTCCGGGCCTTCAACAAGGCGTCGAGGATAACGCGAGCGCAATCGAAAAGGAGATTCGGAATCGCGCGGACGCGATCGCGAAGGAGGTTCGGGATCGAGCAGATGCTGTGGCCGAAGAGGCACGACAGCGCGGTGCCGCGATCACGGCCGAGCAGCAGGCGCGGCAGACGGCCGACAGTTCGCTCGGGCAGCGCATCGATACCGTGTCGGCCGGCGTGGGTGACGCGGCGGCAGCCATCAAGCAGGAGGCGACGGCGCGCGCCGATGCGGACGGTGCGCTATCGGCGCGAATCGATACTGTCGTCAGCAAGACCGACGGCAACGCGGCGGCCATCGTATCGGAAGCGACGACACGGGCGAACGCAGATTCGGCGCTCGGCAAGCGTGTCGACGCCGTAACAGCCGACGTCGGCGCTAACAAAGCAGCGATCACGGCCGAGCAGCAGGCTCGTGCCGATGCAGACGGCGCGCTCTCGTCGCGCATCGATTCGACGACTGCGGTGGCCAACGCGAATAAGGCCGCGATTGCCGCAGAGCAAAGCGCGCGGGCCGATGGGGACTCGGCGTTGTCGAGGCGGATCGATTCCGTTTCGGCACAGATCAATGTGCCGATGGCTGGCGACAGCGGCCAGGCAGCCGGATCTACGCTGGTAATGGCTGGTGTGTATTCGGAGCAGTCGGCGCGAGCCGAGGCCGATATGGCGCTGGCGCAACGGTTCGAATCCGTAACCGCGCGTATGCAGTCGACACAGGCGAATCTGGTGGCCGATATTCGCACGGAGTCGAAGGCGAGGGCGGATGCGGATAGCGCGCAGGCCGAGCAGATCACGACGGTGCGTGCGCAGGTCAACGAAAACTCCGCGGCCGTGCAGACGGTTGCGCAGTCGTACGCGGACCTGAATGGTCGGGTGTCTGCCTCGTACCAGATCAAGACGCAGATCACGTCGGACGGGCGCACGTACATCGCAGGGATTGGGATCGGGATCAATAACGACAGCGGTATTGTCGAGTCGCAGGTGTTGGTGTCGGCCCAGCGCTTCGCGGTGGTTGACCCGAACAACGGCGGCGCTTCGATCGTGCCGTTCGTGGTGCAGGGCGGGCAGGTGTTCTTGCGCCAGGCGCTCATCGGTTCCGGCTGGATCACGAACGCGATGATCGGCAGCTACATCCAGTCCGACAACTACATCGCGGGCCGGCAGGGCTGGCGGCTCGACAAGAGCGGATGGTTCGAGATCAATTCGCCGGACGGGGCTGGGGGACGGACGGTCTATGACAACAACGGCGCGCGCACATACGACGAGAACGGTGTGCTTCGTGTGCGTTGGGGGAGGTGGGCGTGA

Tertiary structure

PDB ID
2d700b9f26707514ccd9070d019b13a227676bc9faf97d0b537263fba63d8e57
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7986
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence and characterization of KS9, a prophage of Burkholderia pyrrocinia LMG 21824 Lynch,K.H., Seed,K.D., Stothard,P. and Dennis,J.J. 2010-02 — GenBank