Protein

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Genbank accession
WDR21455.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,99
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEVVYFSVGVDLGGYKVIYDKDSQRAYSLPIGIPAGTTAISLSTAAILVHSAGSVDLGALAVSREEYVTLSGSFDFGATLNVKNELLTYTDGKYRWDGAFPKTVAAGSTPMTTGGVGIGAWLSVGDTSLRSNLKSSDLNLGDALVTVKKPLPLAVARSLHSVTSEYVSVFDFPGVVGDGVNDDTNGILAALSSSKHVYFPNPPAHFVMKAQMVLEGHTLLADGIGRMWGNTGVEIRFSGFDDDFAIVSKDKTNFIKGFLFRPEVRSNAPDYGLHIQRVIHMADSAIVGFSKSNVKGWEDVSLGYEPWGCTFHNCFFLYAGEHNVVMLQGCNAYTFVDCSTSWAGAPDIGVAATTPAEFYGWYVSQDASLAPVPYPTQPEGLWISGGDSSYNAGGSFFANKGFGLDVNLTYSELNKTCCLNLGGTLAASHFRIGRATESLVTSLPVVTDPTTPFPGTSIYPARDVNQIYINGRDFGTGMKDSVNGKFYKFENEPITVMSSAGAPYIAKIPNTSTGGFELRGSEPGLQINLNEVNLVSSTFHNLPVKLKNLDPLPVASAAYEDAIVSNHTDKKAYVCMWNGTAYQWFPMN
Physico‐chemical
properties
protein length:618 AA
molecular weight: 66257,87140 Da
isoelectric point:5,55939
aromaticity:0,11003
hydropathy:-0,04110

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334
DC_1953
STR
1–611
DC_1953
IPR040775
RBD
91–156
IPR040775 IPR011050
WDR21455.1
1 618
Architecture
ATT
STR
ATT 1-154 | STR 155-611 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDR21455.1
1 618
Domain Start End Length (AA) Confidence
N-terminal 1 212 212 0,9902
Central domain 213 507 296 0,9871
C-terminal 508 618 110 0,8739
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-212
Central
213-507
C-terminal
508-618

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenM_UTK0005
[NCBI] 		3028903 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDR21455.1 [NCBI]
Genbank nucleotide accession
OQ359884.1 [NCBI]
CDS location
range 120270 -> 122126
strand -
CDS
ATGAACGAAATGTTTAGTCAAGGTGGTAAAGGTTCAACTGGAATCTTAACCAATAAACAAGCAGTAGCCAGACACTTTGGTGTTAAACAATCTGAGGTTGTTTACTTTTCAGTTGGTGTAGATTTAGGTGGGTATAAAGTTATCTATGACAAGGATTCGCAAAGAGCTTATTCCTTACCTATTGGTATTCCTGCTGGTACTACTGCCATCAGTCTTAGTACTGCTGCTATACTTGTACATTCAGCAGGTTCTGTAGACTTAGGTGCATTAGCTGTATCTAGGGAAGAATACGTAACCTTATCTGGTTCATTTGATTTTGGTGCTACGCTTAATGTTAAAAATGAATTACTTACTTATACAGATGGTAAGTATCGCTGGGATGGAGCATTTCCTAAAACTGTAGCTGCTGGCTCAACTCCGATGACAACTGGCGGGGTTGGCATTGGTGCATGGTTGAGTGTTGGTGATACATCATTGCGCTCTAATTTAAAAAGTTCTGATTTAAATCTTGGAGACGCGTTAGTTACAGTAAAAAAACCACTACCCCTAGCCGTTGCAAGGTCGCTACATAGCGTAACGTCAGAGTATGTTAGTGTATTTGATTTTCCCGGAGTAGTAGGTGATGGTGTTAATGATGATACTAACGGAATCCTCGCCGCATTATCATCCAGTAAGCATGTGTATTTCCCTAATCCACCTGCACATTTTGTTATGAAGGCTCAGATGGTACTGGAAGGGCATACTCTGTTAGCCGATGGTATTGGTCGTATGTGGGGTAATACAGGTGTAGAAATTCGTTTTTCTGGTTTTGATGATGATTTTGCCATTGTTTCTAAAGATAAGACAAATTTTATTAAAGGTTTCCTATTTAGACCAGAGGTTCGTAGTAATGCTCCAGATTATGGTTTACATATTCAACGCGTAATTCATATGGCAGATAGCGCTATAGTTGGATTCAGTAAATCTAACGTCAAGGGATGGGAAGATGTTTCACTAGGTTATGAACCTTGGGGATGTACATTCCATAATTGCTTCTTCCTGTATGCTGGAGAGCATAATGTGGTAATGCTACAAGGTTGTAACGCGTATACTTTTGTAGACTGCTCAACTTCATGGGCTGGCGCTCCAGATATAGGCGTCGCGGCTACAACACCTGCTGAGTTTTACGGGTGGTACGTATCTCAAGATGCTTCTTTAGCACCTGTTCCTTACCCTACACAACCAGAAGGTTTGTGGATTAGTGGTGGAGATAGTTCATATAATGCTGGCGGTTCTTTTTTTGCGAACAAAGGGTTTGGTTTAGATGTAAATCTTACTTACTCAGAGCTTAATAAGACATGCTGCTTAAATCTTGGCGGAACGCTTGCCGCAAGCCATTTTAGAATTGGAAGGGCAACTGAAAGTCTTGTTACTTCCCTGCCTGTTGTTACAGACCCAACTACACCGTTCCCAGGAACGTCTATTTATCCGGCTAGAGATGTAAACCAGATTTATATAAATGGGAGGGATTTTGGGACAGGAATGAAAGATAGTGTTAATGGCAAATTCTATAAATTTGAAAATGAACCCATTACTGTTATGTCTTCCGCTGGTGCACCATACATAGCAAAAATACCTAATACCTCAACTGGTGGTTTTGAACTAAGGGGGTCAGAGCCTGGGTTGCAAATTAACCTGAACGAAGTTAATTTGGTATCATCAACATTCCATAATTTACCAGTTAAATTGAAGAATCTTGACCCATTACCGGTTGCTAGTGCCGCGTATGAAGACGCTATAGTTTCTAATCACACGGATAAAAAGGCGTACGTTTGTATGTGGAACGGGACAGCTTATCAGTGGTTCCCAATGAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2ef85d1a2f250f7217c450595a91108821891e37974c939fc81dfa9999b07f26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7133
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Bryan,D.W., Hudson,L.K., Wang,J. and Denes,T.G. — — GenBank