Protein

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Genbank accession
XCO40089.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MLPKFNQPKGSTIGVLKDGRTVQQAIDDTVALPHVSPMWQKVRSAMDDVYIVIMGDSTGNETFEWAYQWAAHLAQTVKTHSIRYRLWVDGSGWQGEERMSTGTTERSIFIDNVSVPGSTERYFQGSATDNIFNSGRMYDLVLLNYGHNEGTSVPSITISAGFTEAIFACRQINPMAPIVVTAQNPRRDFPDHSARAVACWADIAGVNGLGVIDVYSAFIKLGSPSELYIDMIHPNAEGHKVWLEVVKKALSDTPAYQFDKVAEPYSGPLRMNLIPNPAFVTWGVDVPALWEANAVTVTQDLSRRESFAYSVKVTCTDVKSPLLYVDLSDTLTASRGQWVTFAARVWRPSGISTNAGRLQISGRGMTAVTSRSKANEAENGWMWAVCHAFVPKGTTSLQARFLGGTVVGDSFNVDRVWFGIGKVPSDIDFMGQPAVTLADYYQAENVGVPVGYDTQVSVDGKHIVATPVTSKARFFININCLTPGQTYKVTWSKASRANGYAYARSSGGGLGTVLDTVRLSAGTTSTFVAPSKTCSFVMESDGINPLDVTIASIVKV
Physico‐chemical
properties
protein length:556 AA
molecular weight: 60484,74510 Da
isoelectric point:6,51877
aromaticity:0,09892
hydropathy:-0,07914

Domains

Domains [InterPro]
DC_1550
ATT
1–40
DC_1550 DC_0332 DC_0332
IPR036514
STR
34–252
IPR036514
SSF52266
STR
47–252
SSF52266
IPR051532
Unmapped
50–252
IPR051532
cd00229
ENZ
84–249
cd00229
IPR013830
ENZ
109–241
IPR013830
XCO40089.1
1 556
Architecture
ATT
STR
ATT 1-40 | STR 41-546 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40089.1
1 556
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,6114
Central domain 48 267 221 0,1957
C-terminal 268 556 288 0,9892
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-267
C-terminal
268-556

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146040
[NCBI] 		3232219 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40089.1 [NCBI]
Genbank nucleotide accession
PP889489.1 [NCBI]
CDS location
range 36379 -> 38049
strand +
CDS
ATGTTACCAAAATTTAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAAGGATGGGCGCACTGTTCAACAGGCCATTGATGACACGGTGGCCTTACCCCACGTTTCCCCCATGTGGCAGAAGGTTCGCAGCGCAATGGATGATGTGTATATCGTCATCATGGGCGACTCTACAGGGAACGAGACGTTCGAATGGGCGTACCAGTGGGCCGCTCACCTTGCACAGACGGTCAAGACCCACTCCATTCGGTATCGCTTATGGGTAGATGGCTCAGGGTGGCAGGGAGAGGAGCGAATGAGTACAGGAACAACAGAGCGGTCCATCTTCATTGATAACGTTTCTGTTCCGGGCAGCACTGAGCGTTACTTCCAAGGGTCGGCTACTGACAACATCTTCAACTCCGGTCGTATGTATGACTTGGTTCTCCTCAACTATGGACACAATGAAGGGACCAGCGTTCCGTCCATCACCATTAGTGCCGGGTTCACTGAAGCAATCTTCGCGTGTCGCCAGATTAACCCAATGGCACCTATCGTCGTAACAGCACAGAACCCTCGCCGCGACTTCCCTGACCACTCTGCCCGCGCGGTAGCGTGTTGGGCCGATATAGCTGGTGTAAACGGACTTGGTGTTATTGACGTGTACTCTGCGTTCATCAAACTTGGCTCACCATCTGAACTGTACATCGACATGATTCACCCTAACGCTGAGGGTCATAAGGTATGGCTTGAAGTTGTGAAGAAGGCGCTTAGCGATACCCCAGCTTACCAGTTCGACAAGGTGGCCGAACCCTACAGTGGTCCGCTTCGTATGAACCTAATCCCAAACCCTGCGTTTGTGACATGGGGTGTTGATGTCCCGGCTCTGTGGGAAGCCAACGCAGTGACTGTGACTCAGGACCTATCCAGACGCGAGAGCTTTGCGTACTCTGTCAAGGTAACATGTACTGACGTAAAAAGTCCTCTCCTCTATGTTGACCTGTCGGATACTTTGACTGCCTCTCGTGGTCAATGGGTAACATTCGCTGCCCGAGTGTGGAGGCCTTCTGGAATCTCAACGAACGCTGGTCGCCTTCAGATTAGTGGCAGAGGAATGACCGCCGTTACGTCTCGCAGCAAGGCAAACGAAGCTGAGAACGGGTGGATGTGGGCGGTATGCCATGCGTTTGTACCTAAGGGTACTACGTCCCTACAAGCCCGTTTCTTGGGCGGTACTGTTGTTGGAGACTCCTTCAACGTTGACCGTGTGTGGTTCGGAATCGGTAAGGTGCCTAGCGACATCGACTTCATGGGACAACCAGCAGTAACTCTGGCTGATTACTACCAAGCCGAGAACGTGGGCGTTCCTGTAGGTTATGACACTCAGGTATCCGTGGATGGGAAACATATTGTGGCAACCCCAGTTACCTCCAAGGCCAGATTCTTCATTAACATTAACTGCCTGACTCCGGGACAGACCTACAAGGTCACTTGGTCTAAAGCCTCCCGGGCTAATGGTTATGCTTACGCCCGGTCGTCTGGTGGTGGGCTTGGTACGGTTCTGGATACTGTCCGTCTATCTGCCGGGACCACGAGTACGTTTGTGGCACCGTCTAAGACCTGCTCGTTCGTAATGGAGTCCGACGGTATAAACCCGCTCGATGTAACCATCGCGTCCATCGTTAAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2bb32664cf3312dc36d66655dfb4fa229b5bcb3c5fa52200d825cb5fbe61412a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7642
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank