Protein

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Genbank accession
CCK74120.1 [GenBank]
Protein name
protein of unknown function
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANNEFMALFGPDSFTANVFSEANAVKYRLVVRGANLSSTLNAIEVSINGADIINRNTQRDRGINLAIIDGTTLALLDYKTFDMYGDPTTNGNALRDYLGSLPANRIVCFYSYDAIGSNANFTAIMRKIGSVAWPEERFFSTDDRRRSSYSAIYSSTMKKICMENFVGGSGSISQDDTRSFVEVVFDEFSDIGVTGIPERMVDDVQTYQNSGSLYGYHGYGSWNIGTDVFRGDIFKVTGDLYCSQELRDAGGDTYLYIWTETAGAQWVASSLLRTTNLTPDTWHSLSIYFTIPQGTENVKMGCQVYHYPSTVNVGLSQCRNVQISKVPREEVNRNGAAIGVNGVRMQTLSEVDTTGTENPIEQLLSLPVSPAGTPSNKTIVSHNFTELDYLVADPTEYTSTDTTQYLVKEWANKQYDFAKVSLSSVGAKPGDVIRIAGQLKRDATAIANNKRAFIIMQFLDANNQYIGAPQPVIIQDVSTVPNVYTFYKSEGVVPAGAVNFDFGFYRYPSNTSTGSVSVKDVKLSIVR
Physico‐chemical
properties
protein length:528 AA
molecular weight: 58151,32700 Da
isoelectric point:5,04374
aromaticity:0,10795
hydropathy:-0,22064

Domains

Domains [InterPro]
DC_0004
STR
1–528
DC_0004
PS52031
LEC
24–201
PS52031
IPR039477
STR
62–132
IPR039477
CCK74120.1
1 528
Architecture
STR
STR 1-528
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CCK74120.1
1 528
Domain Start End Length (AA) Confidence
N-terminal 1 75 75 0,3165
Central domain 76 311 237 0,5684
C-terminal 312 528 216 0,4873
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-75
Central
76-311
C-terminal
312-528

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudotevenvirus RB43
[NCBI] 		115991 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus >
Host Enterobacteriaceae
[NCBI] 		543 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCK74120.1 [NCBI]
Genbank nucleotide accession
HE858210 [NCBI]
CDS location
range 168930 -> 170516
strand +
CDS
ATGGCGAATAACGAATTCATGGCGTTATTCGGCCCTGATAGCTTTACGGCGAATGTGTTTTCAGAAGCAAACGCCGTAAAATATCGATTGGTTGTGCGTGGGGCTAATTTAAGCTCCACACTCAACGCAATTGAGGTTTCTATCAATGGGGCTGATATTATAAACAGAAACACACAACGAGATCGCGGAATTAACCTGGCGATTATTGATGGAACAACGTTAGCATTACTGGATTATAAGACATTTGATATGTATGGTGATCCTACTACGAACGGGAACGCGCTTAGGGACTATTTGGGTTCTCTTCCAGCGAATCGCATTGTGTGTTTTTATAGTTACGACGCAATAGGAAGTAACGCCAACTTTACCGCAATTATGCGTAAAATTGGTTCTGTTGCATGGCCGGAAGAACGTTTTTTCTCAACCGATGATCGTCGTCGTTCGTCGTATTCTGCCATATATTCATCAACCATGAAGAAAATCTGTATGGAAAACTTCGTGGGTGGATCTGGCAGTATATCACAGGATGATACGAGAAGTTTTGTTGAAGTTGTGTTTGACGAATTCAGCGACATCGGCGTTACTGGTATTCCTGAACGTATGGTCGATGATGTACAAACGTATCAGAACAGCGGTTCATTATATGGATATCATGGGTATGGTTCATGGAATATAGGAACCGATGTTTTTCGTGGGGATATATTCAAAGTAACTGGTGATCTGTATTGTTCACAAGAACTTCGTGACGCTGGCGGGGATACGTATCTGTATATCTGGACAGAAACTGCTGGTGCGCAATGGGTAGCGTCTTCTCTGTTGCGTACAACAAACTTAACTCCTGATACGTGGCATTCTTTGTCTATATATTTCACGATCCCGCAAGGCACAGAAAATGTCAAGATGGGTTGTCAAGTATATCATTATCCGTCAACCGTAAACGTAGGTCTTTCTCAATGTCGAAATGTACAAATCAGTAAAGTACCGCGTGAAGAAGTAAACAGAAACGGTGCTGCAATTGGTGTGAACGGTGTGCGTATGCAGACGCTTTCCGAAGTTGACACAACCGGAACTGAAAACCCGATTGAACAGTTACTTTCATTGCCTGTATCACCTGCTGGAACTCCGAGCAATAAAACGATTGTTTCGCATAACTTCACAGAACTTGATTATCTTGTTGCAGATCCAACGGAATATACATCAACCGATACAACCCAATATCTTGTTAAAGAGTGGGCTAATAAACAATATGACTTTGCAAAAGTGTCATTGAGTAGTGTCGGGGCTAAACCTGGTGATGTCATCCGTATTGCGGGACAGCTTAAACGCGATGCGACCGCGATTGCCAACAATAAACGAGCATTCATAATCATGCAGTTCCTTGATGCGAATAATCAGTATATTGGCGCACCACAACCAGTTATTATCCAGGATGTAAGCACAGTACCAAACGTGTATACATTCTATAAAAGCGAAGGTGTCGTTCCTGCTGGTGCTGTGAACTTTGATTTCGGTTTTTATCGTTATCCGAGCAACACAAGCACAGGATCGGTGTCAGTTAAAGACGTTAAATTGTCTATCGTTCGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fda9420a817822bc5069f838f9c9f51a105c8a0306e933d20793a8e050c38da1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6460
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Hsp70 in life cycle of bacteriophages Perrody,E.P. 2012 — GenBank