Protein

View in Explore
Genbank accession
AZF95069.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLVQLIDSTVGLRNELIQPDGAYLSGLGASTVGVLLDATRKLSYYGNDRQALIDLLLHAKGTGSPIDIDVPVLIDTPINIDFEYIPLIMSCSSGRLLSDSTALVLNHLGYGSTINSFDMWNVTAPWAITRWGSTGDWNTSEEAVASLVQTNAPHYYQPTVNDADVWSTLTPEQQNQNISPKLEIHNSDGVVLSMPRGRYALYEFYGCNDCRVFNPSLSGGKGVLGTIVFNNTNSTDYGTDNWVVGGGIRNGSFSGVVHLRNKRGGAINCSPYRSGESGIKTYQNELNGVSARCYEMTYTNCHVKQALYDGLDLASDYGAVSERVADLSLAEAPWQELPTKHTVIGCSGFNCGGNALHIDGTGNTVIGMKASLSGLSGVHDDGTRSVYNDVVSVNNARNNISHQVTLSKSQVINGITLVLDAATGTNFGYGVYAPLSNTKGMDTSLVASGTVIPFIVKAQTTADGDLTVGHSAAPDRICRVLGNPELGLTSTPIMALTSLATGTPSAPSGNVYLNSHYLGSEVPGFQVLGVSGGGGLVSTLNSAYATQVGNSQASFVFHGSSLSIVARDAAGVLRQYALTGVPV
Physico‐chemical
properties
protein length:584 AA
molecular weight: 61571,13420 Da
isoelectric point:5,24268
aromaticity:0,07363
hydropathy:-0,02483

Domains

Domains [InterPro]
IPR012332
38–579
IPR012332
IPR015331
79–442
IPR015331
IPR011050
81–441
IPR011050
AZF95069.1
1 584
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage Zenivior_B1
[NCBI] 		2489636 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF95069.1 [NCBI]
Genbank nucleotide accession
MK095211 [NCBI]
CDS location
range 41406 -> 43160
strand -
CDS
ATGAGTTTAGTACAGTTAATAGATAGTACTGTAGGTTTACGTAATGAGTTAATACAACCTGACGGTGCATACCTTTCGGGTTTAGGTGCTTCTACAGTTGGTGTCCTTCTTGATGCTACGAGAAAGTTATCCTACTACGGTAACGATAGACAGGCTCTTATTGATTTGTTGTTGCATGCTAAGGGTACAGGTAGCCCCATTGATATTGATGTACCTGTACTTATTGATACGCCTATTAACATAGACTTTGAGTACATACCCCTAATTATGAGTTGTTCATCTGGTAGATTATTATCAGATAGCACTGCCCTTGTACTCAATCACTTGGGTTACGGTTCCACTATTAATAGTTTTGATATGTGGAATGTAACAGCACCTTGGGCTATTACTAGGTGGGGTAGCACTGGTGACTGGAACACATCTGAGGAAGCCGTTGCATCACTAGTACAGACAAATGCCCCACATTACTATCAACCAACGGTTAATGATGCTGACGTATGGTCCACACTTACGCCTGAGCAGCAGAACCAAAACATTAGCCCTAAACTTGAAATTCATAACTCAGACGGTGTTGTACTGAGTATGCCAAGGGGTAGATACGCCCTGTATGAGTTTTATGGTTGTAATGACTGCCGTGTGTTCAACCCTAGTCTGTCGGGTGGTAAGGGCGTGTTGGGTACTATAGTATTTAATAATACCAACTCTACGGACTACGGTACTGATAACTGGGTGGTCGGTGGTGGTATTAGGAACGGGTCTTTCTCTGGGGTAGTGCACTTACGTAATAAGCGAGGCGGGGCGATTAATTGTAGTCCCTATCGTTCTGGTGAGTCGGGTATCAAAACATACCAGAACGAGCTAAATGGCGTATCCGCGCGCTGTTATGAGATGACGTACACCAACTGCCATGTTAAGCAGGCGTTATATGATGGTTTAGACTTAGCATCTGATTATGGTGCAGTGTCTGAGCGTGTTGCTGATTTATCATTAGCAGAAGCGCCGTGGCAGGAGCTACCAACAAAACACACTGTGATTGGTTGTTCTGGTTTTAATTGTGGTGGTAATGCTTTGCATATTGACGGTACAGGTAATACTGTTATAGGTATGAAAGCTAGTCTTAGTGGTTTATCCGGTGTACATGATGATGGTACACGTAGTGTGTACAATGATGTTGTGTCAGTAAACAACGCACGTAATAATATATCCCATCAGGTTACACTATCTAAGAGCCAAGTTATTAATGGTATTACGCTGGTACTAGACGCCGCTACAGGTACGAATTTCGGGTATGGTGTGTACGCTCCTTTATCTAACACTAAGGGTATGGACACCTCGTTAGTCGCGTCAGGGACTGTAATACCCTTCATAGTCAAGGCACAGACTACGGCTGATGGTGATTTAACAGTAGGGCACTCTGCGGCACCTGACCGTATTTGTCGTGTACTAGGTAATCCTGAGCTTGGTTTAACTAGTACTCCTATTATGGCTCTTACATCCCTCGCTACTGGTACACCATCCGCACCTTCTGGTAATGTGTATTTGAACTCACACTACCTAGGGTCTGAGGTTCCCGGTTTTCAGGTACTAGGAGTAAGTGGCGGAGGTGGTTTAGTGTCGACACTCAACAGTGCGTACGCTACACAGGTAGGTAACTCACAAGCCTCCTTTGTGTTTCACGGCTCATCCTTGAGTATTGTAGCGAGGGACGCCGCAGGCGTATTGCGGCAGTACGCACTCACTGGTGTGCCTGTGTAA

Tertiary structure

PDB ID
a6e678bf459ca27b50dd6deddece326f587a38bd581fa29a175939fb449116aa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6095
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel 6-phage cocktail reduces Pectobacterium atrosepticum soft rot infection in potato tubers under simulated storage conditions Carstens,A.B. 2019-05-01 — GenBank