Protein

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Genbank accession
AHL18687.1 [GenBank]
Protein name
DUF2479 domain-containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MTNYIMANSYAFDGTDDFIHGVYEVDETLTTVKILLNGTDTNLNAIAGFTNGTTFMADVSTIKSQITLTTVVTMIMYNGTKELARCPVPIYSQANPPVPKSADKKYTLALDLVKDTENVVLISRIADKDLTSVLVKLTNNGEAINLVGRTPLFECQLPAQTGEYANFVRDDGIANGNMIIVDAEQGIIQYNFVKETFSKVGAINIAYFALETPVGDIVKRVTTRNFKIIVTDSAIEGKINADDYISDIESLKAEIEIRLAPVIAEMVQLKADVADASAQMDEIEALITANQVIKTADAVNWQKQKITDDTGANLLTTGSDTSKDILDIIKTAGIGLRTFYAVSGAVNNPTANTPLRGISHLTTATTGWVIGWDSFGNSYSTFLNGTAGWVLPWKENATMSDVANQLATAVSTLNTRMDSMQNIQLFDNSGVPIVNLDTDSGLDIYTELNKVPAGMYMTRISGTAGTTNPNTNVPPTTIRGYTYIEVQGTWGNLYGVGSNQTMVMNQLNSGVWQGWRVQDARDTGWINITGFNSGWSTDATNPPAYRKVGNKVSLRGVVHMDTAAKKGVIATLPAGYRPMVGNQNGWICARQTTGVNYMAEVYVSSAGNLEVVWINGNGTQGIWLTPIEFYID
Physico‐chemical
properties
protein length:632 AA
molecular weight: 68531,65250 Da
isoelectric point:4,73238
aromaticity:0,08070
hydropathy:-0,07389

Domains

Domains [InterPro]
IPR018913
104–255
IPR018913 Coil
G3DSA:2.60.40.3350
104–236
G3DSA:2.60.40.3350
AHL18687.1
1 632
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LP-114
[NCBI] 		1458857 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes FSL J1-208
[NCBI] 		393119 Bacteria > Firmicutes > Bacilli > Bacillales > Listeriaceae > Listeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHL18687.1 [NCBI]
Genbank nucleotide accession
KJ094021 [NCBI]
CDS location
range 50503 -> 52401
strand +
CDS
ATGACTAACTATATCATGGCAAACTCCTACGCCTTTGACGGCACGGATGATTTTATTCATGGCGTTTACGAGGTAGACGAAACATTAACTACTGTTAAGATATTACTTAACGGAACCGATACAAACTTAAATGCAATTGCAGGATTCACTAATGGGACAACCTTTATGGCTGACGTTTCCACTATCAAATCTCAAATCACATTAACTACTGTGGTTACAATGATTATGTATAATGGAACTAAAGAGCTTGCGAGATGTCCTGTTCCTATCTATAGCCAAGCAAATCCACCAGTTCCAAAATCAGCTGATAAGAAATACACACTTGCTTTGGATTTAGTAAAAGACACAGAAAATGTGGTGCTTATATCCCGCATCGCGGATAAGGATTTAACGTCCGTATTAGTTAAGTTAACCAATAACGGTGAAGCAATTAACTTAGTCGGACGTACTCCATTATTTGAATGTCAATTACCCGCACAAACAGGTGAGTATGCTAACTTCGTCCGTGATGATGGGATAGCAAATGGCAATATGATTATTGTAGATGCCGAACAAGGAATCATTCAATACAACTTTGTTAAAGAGACTTTCTCCAAAGTAGGAGCCATCAACATTGCTTATTTTGCTTTAGAAACACCAGTTGGTGATATTGTAAAACGTGTCACAACACGTAACTTTAAAATCATTGTAACAGATAGTGCTATTGAAGGAAAGATAAATGCTGACGATTACATCTCTGACATTGAGTCGCTTAAAGCTGAGATTGAAATTAGGCTTGCTCCTGTAATTGCTGAAATGGTTCAACTGAAAGCAGATGTGGCAGATGCTAGTGCACAGATGGATGAGATAGAAGCACTGATTACAGCTAACCAAGTAATCAAAACAGCTGATGCAGTTAACTGGCAGAAACAGAAGATTACTGATGACACAGGTGCCAACTTACTTACAACTGGCTCAGACACTTCAAAAGATATTCTTGATATTATAAAAACAGCAGGAATAGGTTTACGAACATTCTATGCAGTATCAGGTGCTGTAAATAACCCAACGGCTAATACTCCTTTAAGAGGAATTTCTCATCTAACAACAGCTACAACCGGATGGGTAATTGGATGGGATTCCTTTGGAAACTCTTATTCAACTTTCTTAAATGGAACAGCTGGTTGGGTACTTCCTTGGAAAGAGAACGCCACAATGTCTGATGTTGCTAACCAATTAGCAACCGCAGTTTCTACCTTAAACACTAGAATGGATTCCATGCAGAACATCCAGCTATTTGATAATAGCGGTGTTCCTATAGTAAATCTAGATACGGACAGTGGATTAGATATTTACACAGAGCTAAATAAAGTTCCGGCTGGTATGTATATGACACGAATTTCTGGTACTGCTGGAACAACAAATCCTAATACTAATGTTCCTCCTACCACCATCCGGGGATATACCTATATTGAGGTACAAGGTACTTGGGGGAATTTATATGGAGTAGGCTCCAACCAGACTATGGTAATGAACCAACTAAATAGCGGAGTGTGGCAAGGATGGAGAGTGCAAGATGCACGAGATACTGGCTGGATAAATATCACAGGATTTAATTCTGGATGGTCAACTGATGCTACAAACCCTCCGGCATATCGTAAAGTAGGTAATAAGGTTTCATTACGTGGAGTTGTTCACATGGATACCGCTGCTAAGAAAGGTGTTATCGCAACACTTCCTGCTGGTTATCGTCCAATGGTAGGTAATCAAAATGGTTGGATATGTGCACGTCAAACCACTGGTGTTAACTATATGGCAGAGGTTTATGTAAGCAGTGCAGGTAACTTAGAGGTTGTATGGATAAATGGTAACGGAACACAAGGTATTTGGTTAACGCCAATAGAATTTTATATTGACTAA

Tertiary structure

PDB ID
a7fcd88ffc326a77ce251bb09eb5a69cc8247718c423dcb79bf8179d3fc7563d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7585
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50