Protein

View in Explore
Genbank accession
XYM48756.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MAGESAFEVFVNGELPKRISTEDNPLEVVAGKIPVSTGAGLATTFKDPTEIEGMKGEDGADGKSAYQLALDAGFIGTEAEWLESLKGEDGAKGDTGLQGNPGEPGPVTNIKGTVTLDDFETNIAPIDSWEFGDAWFVRSSTATVLKVWSAPETGSPDAGQWIDSGDMRGPEGTGLVIRGQWPDNQELPPLAAKGDTYGWKNALYTFMLVAGEEDIFPDNYAYIQIVPMGPEGPKGDTGAKGDKGDRGLKGDTGAPGKDATPFTIKADLASEDDLPLAGDAKPEEAYSVMVDDVRHLFVFSVDENRWMDLGTWQGPKGEPGQDGIIGGDGPKGDKGDKGDKGDPGQDGIDGQDGAPGENLEILGTYPTMADLLAAGATLVIKKAYAVRDVNTLFYVATTPVTSEGDLINLGQFKGEKGDKGDKGDKGDTGAKGDKGDTGDGGKNLVVSGVLPDLAAIQAVPDPQEQEAWVAADNRHLYMFIDGAWVDLGTHTGAKGDKGDKGDKGDTGAKGDTGDKGDKGDQGENFEIIAVVDTVGEVPPATADNKGKAVVVKGGDVYVNISGTQFVSVGPIGQKGEQGDRGASMRIVGEVGSVEALPELVAGETDPADGEAYIVTVIQGDDTIKVIYVANRSTNTYDGPFNIQGPQGNDGPQGEVGPRGEIGQGIKIVGDYPSEAALTAAHPTSAIGDAYSVGPENSKELFVWAVDGADDTEKYLNLGSFTVGAKGEKGDKGDQGIVGPRGIQGAKGDKGSRWVILPNGVDIPNNTIGTQDDWCLDKSGKVWYRDATGWKEFIQLLDVPVAEVETADQNKKMVRYQLGWAPLLVDEVETPEEGEQYIRKGKADGTTEWAPLEVDAVPDVPTPNIALAMVRKDGEWKQGAPIVIANDVDKHYVLKGKASWVETDVFKDAASDGKSYARKDGAWAAVVPETTNDDKLYARKTTVAGVSSWVEVPAAIIASDAPDAKNYTRSNGEWKELVTIPEPGIDATKVWGRQTTAAGTSAWVEIKKEFDTYSLLSGAAPAGNFTITPANQQCYTVPSTAARTITLGDGPSGRMITAVLVLTGTVIPTFSGNFKWNDNTAPEAAATKTVITLLWDGSEWLGAKGAGY
Physico‐chemical
properties
protein length:1107 AA
molecular weight: 116364,42340 Da
isoelectric point:4,40885
aromaticity:0,07317
hydropathy:-0,43297

Domains

Domains [InterPro]
IPR050149
53–751
IPR050149 G3DSA:6.20.230.10
IPR008160
314–357
IPR008160
XYM48756.1
1 1107
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiHQ
[NCBI] 		3402740 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM48756.1 [NCBI]
Genbank nucleotide accession
PV029745 [NCBI]
CDS location
range 152698 -> 156021
strand -
CDS
ATGGCTGGTGAATCCGCATTTGAAGTTTTCGTTAACGGTGAGTTACCAAAACGTATCTCCACCGAAGACAATCCTCTTGAGGTAGTTGCAGGCAAGATCCCGGTTTCGACCGGGGCTGGCCTGGCTACAACTTTCAAAGACCCGACCGAAATCGAGGGAATGAAAGGTGAGGATGGCGCGGATGGTAAATCCGCTTATCAGCTGGCACTCGATGCTGGCTTTATTGGTACCGAAGCCGAGTGGCTCGAATCGCTGAAAGGCGAAGACGGCGCTAAAGGTGATACTGGTCTGCAAGGTAATCCTGGTGAACCGGGTCCCGTTACCAATATCAAAGGTACCGTAACTCTTGACGATTTCGAAACCAACATTGCTCCCATCGATAGTTGGGAATTTGGTGATGCTTGGTTCGTTCGTTCTTCCACTGCTACTGTACTGAAAGTATGGTCTGCCCCAGAAACCGGTTCGCCGGATGCTGGCCAGTGGATCGACTCCGGTGACATGCGTGGTCCGGAAGGTACTGGTCTTGTTATTCGTGGTCAATGGCCTGATAACCAAGAACTTCCGCCCTTGGCTGCCAAAGGTGATACCTACGGTTGGAAAAATGCTCTTTACACTTTCATGCTTGTAGCTGGTGAAGAAGATATCTTCCCTGACAACTATGCATACATTCAGATCGTGCCGATGGGTCCTGAGGGTCCTAAAGGTGATACTGGTGCCAAAGGTGATAAAGGCGACCGTGGTCTGAAAGGTGACACTGGTGCACCTGGTAAGGACGCTACTCCGTTCACTATTAAAGCCGACTTAGCTTCCGAAGATGATCTGCCTCTGGCTGGCGATGCCAAGCCTGAAGAAGCATATTCGGTTATGGTTGACGATGTACGCCATCTATTCGTCTTCTCCGTCGATGAAAACCGCTGGATGGATCTCGGTACTTGGCAGGGCCCGAAAGGTGAACCTGGTCAAGACGGTATCATCGGTGGCGACGGCCCGAAAGGGGACAAAGGTGATAAGGGTGATAAAGGCGATCCTGGCCAAGATGGTATCGATGGTCAAGACGGTGCTCCTGGTGAAAACCTGGAAATCCTTGGTACGTATCCGACCATGGCAGATCTTCTGGCCGCAGGTGCTACTCTTGTCATCAAGAAAGCTTACGCTGTTCGCGATGTTAACACCCTCTTCTACGTAGCTACTACTCCTGTTACCTCTGAAGGCGACCTGATTAACCTAGGTCAATTCAAAGGTGAGAAGGGCGACAAAGGAGATAAAGGTGACAAAGGGGATACCGGTGCAAAAGGCGATAAGGGTGACACCGGTGACGGTGGTAAGAACCTGGTTGTCTCCGGTGTTCTTCCTGACCTTGCTGCCATTCAAGCCGTACCTGATCCGCAAGAACAGGAAGCTTGGGTAGCTGCCGATAACCGCCACCTCTACATGTTCATTGATGGAGCATGGGTTGACCTTGGTACTCATACTGGCGCCAAAGGCGATAAAGGGGACAAGGGCGATAAGGGTGATACTGGCGCCAAGGGTGACACTGGTGATAAAGGCGACAAAGGTGATCAGGGTGAAAACTTTGAAATCATCGCTGTTGTTGACACTGTAGGTGAAGTTCCTCCGGCCACTGCCGACAACAAAGGTAAAGCCGTTGTTGTTAAAGGCGGCGATGTTTATGTAAACATTAGTGGTACTCAGTTCGTATCTGTTGGTCCCATTGGCCAGAAAGGTGAACAGGGTGATCGTGGCGCCTCGATGCGCATCGTTGGTGAAGTAGGTTCTGTTGAAGCTCTACCTGAACTGGTAGCCGGTGAAACTGATCCCGCTGATGGCGAGGCGTACATTGTTACCGTTATCCAGGGTGATGACACCATTAAGGTAATCTACGTAGCTAACCGCTCTACGAATACCTACGATGGTCCGTTCAATATCCAGGGTCCGCAAGGTAACGATGGTCCGCAGGGTGAAGTAGGTCCTCGCGGTGAAATCGGCCAAGGTATCAAAATTGTTGGCGACTATCCGTCTGAAGCTGCTCTTACAGCTGCTCATCCGACTAGTGCTATTGGTGATGCATATTCGGTTGGTCCTGAAAACAGTAAAGAACTGTTTGTTTGGGCTGTCGATGGTGCTGATGATACTGAGAAGTATCTGAACCTGGGTAGCTTCACCGTTGGCGCCAAAGGCGAGAAAGGTGATAAGGGTGACCAAGGTATCGTTGGTCCTCGCGGTATTCAAGGTGCAAAAGGTGATAAAGGTTCTCGTTGGGTAATTCTACCGAACGGTGTCGATATCCCGAATAACACTATTGGTACTCAAGATGACTGGTGCCTTGATAAGTCTGGTAAAGTTTGGTATCGTGACGCAACTGGCTGGAAAGAATTCATCCAACTTCTGGATGTTCCTGTAGCCGAAGTAGAAACTGCCGATCAGAACAAGAAGATGGTTCGCTATCAACTTGGCTGGGCACCTCTACTGGTCGATGAAGTGGAAACCCCTGAAGAAGGTGAACAGTATATCCGTAAGGGTAAAGCTGATGGCACCACCGAATGGGCTCCGCTTGAAGTAGATGCTGTACCAGACGTTCCTACTCCCAACATTGCTCTTGCAATGGTTCGTAAGGACGGTGAGTGGAAACAAGGTGCACCTATTGTCATTGCCAACGATGTTGATAAGCATTACGTTCTGAAGGGTAAGGCTAGCTGGGTCGAAACCGATGTCTTTAAAGACGCGGCTAGCGATGGTAAGTCTTACGCTCGTAAGGATGGTGCTTGGGCTGCGGTAGTACCTGAAACTACCAATGATGATAAACTGTACGCTCGTAAAACTACTGTTGCTGGCGTGTCCAGCTGGGTAGAGGTACCGGCTGCAATTATCGCATCGGATGCTCCGGATGCCAAGAACTACACTCGTTCTAACGGTGAGTGGAAAGAACTGGTAACCATTCCGGAACCAGGTATCGATGCTACTAAAGTTTGGGGTCGTCAGACAACTGCTGCTGGTACATCGGCGTGGGTAGAGATCAAGAAAGAATTTGATACCTACTCCCTGCTATCTGGTGCTGCTCCTGCTGGTAACTTCACCATCACTCCGGCTAACCAACAGTGCTATACTGTTCCATCTACTGCTGCTCGTACTATCACTCTAGGTGATGGTCCGTCTGGCCGAATGATTACAGCTGTACTGGTTCTAACTGGTACGGTCATTCCGACCTTCAGCGGTAACTTCAAATGGAATGATAACACGGCTCCTGAAGCTGCTGCAACCAAGACTGTCATCACCCTTCTGTGGGATGGTAGTGAATGGCTCGGCGCTAAAGGTGCTGGCTACTAA

Tertiary structure

PDB ID
6e77ab2904ab8045a058a71699d3c911c2923d8c1720d942b64ec0bc04dbf69d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5636
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Characterization of Phikzvirus realted Pseudomonas phage phiHQ: A Promising Candidate Against Uropathogens Qamar,H., Khan,M.S.I., Afzal,S. and Malik,K. 2022-09-14 — GenBank