Protein

View in Explore
Genbank accession
ACF15928.1 [GenBank]
Protein name
gp17
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MANVIKTVLTYQLDGSNSDFNIPFEYLARKFVAVTLIGVDRKVLTINTDYRFATRTTISLTKAWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTIHVAEEARDLTADTIGVNNDGHLDARGRRIVNLANAVDDRDAVPLGQLKTMNQNSWQARNEALQFRNEAETFRNQAEGFKNESGTNATNTKQWRDETKGFRDEAEQFKNTAGQYDTSAGNSASAAHQSEVNAENSATASANSAHLAEQQADRAEREADKLGNFNGLAGAIDKVDGTNVYWKGNIHANGRLYITTNGFDCGQYQQFFGGDTNRYSVMEWGDDNGWLMYVQRREWTTAIGGNIQLVVNGQIITQGGAMTGQLKLQNGHVLQLESASDKAHYILSKDGNRNNWYIGRGSDNNNDCTFHSYVHGTTLTLKQDYAVVNKHFHVGQAVVSTDGNIQGTKWGGKWLDVYLNDTYVKKTMAWTQVWAADSGKYLPGGSQTDTLPQDLRFRNIWIRTRNNYWNFFRTGPDGIYFLSAEGGWLKFQIHSNGRVFKNISDRDAPPTAIAVEDV
Physico‐chemical
properties
protein length:558 AA
molecular weight: 62276,90010 Da
isoelectric point:5,98301
aromaticity:0,10215
hydropathy:-0,60484

Domains

Domains [InterPro]
IPR005604
1–131
IPR005604 Coil G3DSA:6.20.80.10 G3DSA:6.20.70.20 G3DSA:2.60.320.30
IPR048388
371–463
IPR048388 IPR022246
ACF15928.1
1 558
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage 13a
[NCBI] 		532076 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACF15928.1 [NCBI]
Genbank nucleotide accession
EU734174 [NCBI]
CDS location
range 33088 -> 34764
strand +
CDS
ATGGCTAACGTAATTAAAACCGTTTTGACTTACCAGTTAGATGGCTCCAATAGTGATTTTAATATTCCGTTTGAGTATCTAGCCCGTAAGTTCGTAGCGGTAACTCTTATTGGCGTAGACCGCAAGGTCCTTACGATTAATACAGACTACCGTTTTGCTACTCGCACCACTATCTCTCTTACAAAGGCTTGGGGTCCAGCCGATGGCTACACGACCATCGAGTTACGTCGAGTAACATCCACGACCGACAGATTGGTTGACTTTACGGACGGCTCAATCCTCCGTGCGTATGACCTTAACGTAGCTCAGATTCAAACGATTCACGTAGCGGAAGAGGCCCGTGACCTCACTGCGGATACTATCGGTGTCAATAACGATGGTCACTTGGATGCTCGTGGTCGTCGAATTGTGAACCTAGCGAACGCCGTGGATGACCGCGATGCTGTTCCGCTTGGTCAACTAAAGACCATGAACCAGAACTCATGGCAAGCACGTAATGAAGCCTTACAGTTCCGTAATGAGGCTGAGACTTTCAGAAACCAAGCGGAGGGCTTTAAGAATGAGTCCGGTACTAACGCTACGAACACAAAGCAGTGGCGAGATGAGACCAAGGGTTTCCGAGACGAAGCCGAGCAGTTCAAGAATACGGCTGGTCAATACGATACATCTGCTGGGAACTCTGCTTCCGCTGCGCATCAATCTGAGGTAAACGCTGAGAACTCTGCCACAGCATCCGCTAACTCTGCTCATTTGGCAGAACAGCAAGCAGACCGTGCGGAACGTGAGGCAGACAAGCTGGGGAATTTTAATGGACTGGCTGGTGCAATTGATAAGGTAGATGGAACCAATGTGTACTGGAAGGGAAATATTCACGCTAACGGGCGCCTTTACATTACCACAAACGGTTTTGACTGTGGTCAGTATCAACAGTTCTTTGGTGGTGACACTAATCGTTATTCTGTCATGGAGTGGGGAGATGATAACGGATGGCTGATGTATGTTCAACGTAGAGAGTGGACAACAGCGATAGGCGGTAACATCCAGTTAGTAGTAAACGGACAGATCATCACCCAAGGCGGAGCCATGACTGGTCAGCTAAAATTGCAGAATGGGCATGTTCTTCAATTAGAGTCCGCATCCGACAAGGCGCACTATATTCTATCTAAAGATGGTAACAGGAATAACTGGTACATTGGTAGAGGGTCAGATAACAACAATGACTGTACCTTCCACTCCTATGTACATGGTACGACCTTAACACTCAAGCAGGACTATGCAGTAGTTAACAAACACTTCCACGTAGGTCAGGCCGTTGTGTCCACTGATGGTAATATTCAAGGTACTAAGTGGGGAGGTAAGTGGCTTGATGTTTACCTAAACGATACTTACGTTAAGAAGACAATGGCTTGGACTCAAGTATGGGCTGCTGATAGTGGTAAGTACCTGCCAGGAGGTTCTCAGACTGATACTCTCCCACAGGACTTACGATTCCGCAACATATGGATTAGGACCAGAAACAACTATTGGAACTTCTTCCGAACTGGTCCTGATGGTATCTACTTCCTTTCAGCCGAGGGCGGTTGGCTAAAATTCCAGATACACTCTAATGGCAGGGTATTTAAGAACATATCGGATAGAGATGCGCCTCCAACAGCAATAGCCGTAGAGGACGTGTAA

Tertiary structure

PDB ID
293c12e380fad6c82afe6c77d3bc7acc4a9dfe0590660fc4d568cc18ca9d95cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7221
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic sequences and analysis of several T7-like bacteriophages Savalia,D., Severinov,K. and Molineux,I. 2013-02-01 — GenBank