Protein

View in Explore
Genbank accession
AIK68327.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MARKTIDELPVATPEAVATGSLIIADENGLEYRATTAIIGGVHLYFTAEDDQTPWIFGRLTSPGRTVEEITVTFVAVPRGGGTTLTKTTKTDSLGNFTYNFTTLVRGVTYDITASVAPYLAEVTVKYVAPLSAPIDTPVATSTGKVGDTITVSAPNFDGSPTSFKYRYLRGPNYIIPGANESVYTLTPDDDADVITAQVQAVNAGGESIWYSANPIGPVSNKTSVAISDPVIIGDNTLGGRLVLTSPGTATENAIVKSDEWQLDGVKIPSTKAPLKRYLAGAANGSASASYPSGNNHFGVALISTMYTGSNTYSYSIAANATENDYIALNVGASGGNEGPQLYDLYMRHLNTNAAIRIKMYAAKYRGGVLQGEEIQMAKVGAAAGQEYSALAVTTNSVSRWTLTADFGEWVSGDYLVFRQQSTNVSSAGSNNYQWDARSGASYLMAPIGSVQDIQKTLKTFTSKADMGTKAARLKQTLSNGNNDVVLYSNEIVYEAAVTQTEVPENLTLPTIVTNSDRANTTWQADLGAWSNQPTAYNVQWTDNGVDIAGATLMNYKSTTAQEGHDITFYVIAQNAIGNSEPAIAVAHTVQAAATYYNIATGNDLNDGSTEALAKQSLASTESIPSGSTAILAGDFGTRLKLGNSRNYEGLGAGLTSIGSLTTQYAIDHYTDDGSLGRSNVKISKMTINSADRAILARQGANWVLEDIVIDSAGFGAGVIAENASGIMFYKNNGITMRRCSLLNIKSDGLYLDTIDRAIVEDCLFLPVNTAEGDTIQTRADRTSSSGAPGPHQKGFIMSGTFLDMHSKKTGSGKGCLVTNMADYVYCHDNQLDGNNFVHGTDEGDCQVYCRNTNRYARMNSYSFGYGIGGYDNQPASYNHQLYDNSWYDINRALTFTGISVTGYSGTKSGRVDIVAHDETIVKCASGIRIDRPTSGIFRGFVFHNVTRPVDRVLTTLPPGGEVQAFISDSHYTYNGSILVPPTVTTHAVITGDRTVGSELTGPNSVFDTTAVLTAFPGAVITRSYQWRRHKPQVQWAGWSQHLGWKCEWIAGATSASYTITDDDQGCLISRVDRIHLSFTEASVAKVVTALSYDASYATSTPIPRSGDLAVPLPVIPSSGTVSFAAAEGAVALNLPALITGETRTLLNPSRAHEVYTGNLLTVDSNGDILKGAGTFTLGQTFGMKLRQKRGIDTVDSTISFTVVA
Physico‐chemical
properties
protein length:1205 AA
molecular weight: 128508,61570 Da
isoelectric point:5,31811
aromaticity:0,08548
hydropathy:-0,16680

Domains

Domains [InterPro]
G3DSA:2.60.40.2700
132–218
G3DSA:2.60.40.2700 IPR036116 G3DSA:2.60.40.2700
IPR003961
503–593
IPR003961
IPR011050
584–947
IPR011050
AIK68327.1
1 1205
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage vB_RleM_P10VF
[NCBI] 		1527770 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhizobium leguminosarum
[NCBI] 		384 Bacteria > Proteobacteria > Alphaproteobacteria > Rhizobiales > Rhizobiaceae > Rhizobium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIK68327.1 [NCBI]
Genbank nucleotide accession
KM199770 [NCBI]
CDS location
range 76348 -> 79965
strand -
CDS
ATGGCACGCAAAACAATCGATGAACTTCCAGTTGCGACTCCTGAAGCCGTAGCTACCGGAAGTCTGATCATCGCTGATGAGAACGGCCTAGAGTATCGAGCAACGACTGCTATTATCGGCGGCGTTCATCTGTACTTCACTGCCGAAGACGACCAGACTCCGTGGATCTTTGGACGACTCACGAGTCCTGGCCGTACTGTCGAAGAAATCACTGTGACCTTCGTCGCTGTTCCTCGTGGAGGCGGTACGACTCTCACGAAGACTACAAAGACAGACTCACTCGGCAACTTCACATACAACTTCACAACTCTTGTTCGTGGTGTCACATACGACATCACAGCGAGTGTTGCTCCGTATCTCGCGGAAGTGACTGTCAAGTATGTCGCTCCACTGTCTGCACCTATCGACACACCAGTTGCAACTTCGACCGGTAAGGTCGGCGACACAATCACCGTTTCAGCTCCGAATTTCGACGGAAGCCCGACATCGTTCAAATATCGGTATCTCCGCGGTCCGAACTACATCATCCCCGGAGCAAACGAATCAGTCTATACTCTCACTCCTGACGACGACGCGGACGTCATCACGGCTCAAGTCCAGGCAGTCAACGCAGGAGGCGAGAGCATCTGGTATAGCGCAAATCCGATCGGTCCTGTCTCGAACAAAACGTCTGTGGCGATCTCGGATCCGGTCATCATAGGAGACAACACTCTCGGCGGACGTCTGGTTCTCACGTCTCCAGGAACTGCAACAGAGAATGCTATTGTCAAGTCTGACGAATGGCAACTTGACGGAGTCAAGATCCCGTCGACGAAAGCTCCTTTGAAGCGATATCTCGCTGGTGCTGCGAATGGATCAGCTTCAGCATCGTATCCTTCAGGCAACAACCACTTCGGCGTAGCTCTTATAAGCACGATGTACACAGGATCGAACACTTACAGTTATTCGATTGCCGCGAATGCTACAGAAAACGATTACATCGCTTTGAACGTAGGAGCTTCGGGCGGAAACGAAGGACCGCAACTCTACGATCTTTACATGAGACATTTGAATACGAACGCTGCTATTCGTATCAAGATGTATGCAGCTAAATATCGCGGTGGTGTTCTACAAGGCGAAGAAATCCAGATGGCGAAAGTCGGAGCCGCAGCTGGACAAGAGTATTCGGCTCTTGCAGTCACTACGAATTCTGTGTCTAGATGGACGCTGACTGCTGATTTCGGCGAATGGGTCTCTGGTGATTATCTCGTCTTCCGTCAGCAATCTACGAACGTCTCGTCAGCTGGTTCAAACAACTACCAGTGGGATGCACGATCTGGCGCTTCGTATCTGATGGCTCCGATCGGCTCCGTCCAAGACATTCAGAAGACTCTGAAGACGTTCACGAGTAAAGCAGACATGGGTACAAAGGCAGCTCGGCTCAAGCAGACTCTATCGAACGGAAACAACGATGTAGTGTTGTATTCGAATGAGATCGTCTACGAAGCTGCTGTAACTCAGACTGAGGTTCCTGAAAATCTTACTCTTCCGACTATCGTCACAAATTCGGACAGAGCTAACACTACGTGGCAAGCTGATCTCGGTGCATGGAGCAATCAGCCAACAGCATACAATGTTCAGTGGACCGACAACGGTGTCGACATCGCTGGTGCTACACTGATGAACTACAAGTCAACGACTGCTCAAGAAGGACACGACATCACGTTCTACGTGATCGCCCAAAACGCAATCGGTAATTCTGAGCCAGCGATTGCTGTAGCTCATACTGTTCAAGCAGCTGCAACGTACTACAACATCGCTACTGGTAACGATCTCAACGATGGTTCGACTGAAGCACTTGCGAAACAGTCTCTTGCAAGTACTGAATCTATTCCATCTGGATCGACAGCAATTCTCGCTGGTGACTTCGGCACTCGGTTAAAACTAGGTAACAGCAGAAACTACGAAGGTCTTGGTGCTGGACTCACGTCTATCGGTTCGTTGACGACTCAATACGCGATCGATCATTACACCGACGACGGCTCGCTCGGTCGATCCAACGTCAAGATTTCGAAGATGACGATCAACTCGGCGGACCGTGCTATCTTGGCTCGCCAAGGAGCAAACTGGGTTCTCGAAGACATCGTTATCGACAGCGCCGGCTTCGGAGCTGGTGTCATTGCCGAAAACGCTTCTGGCATCATGTTCTACAAGAATAACGGCATCACGATGCGTCGATGCTCGCTTCTGAACATCAAGTCTGACGGCCTCTATCTCGACACGATCGACAGAGCCATTGTCGAAGACTGCCTCTTTTTGCCAGTCAACACTGCAGAAGGCGACACGATTCAGACTCGCGCTGACAGAACTTCGAGCAGTGGTGCACCAGGTCCTCACCAAAAGGGCTTCATCATGAGCGGCACCTTCCTCGACATGCATTCGAAGAAGACTGGATCTGGTAAAGGCTGCTTGGTCACCAACATGGCCGATTACGTCTACTGCCATGACAACCAACTCGACGGCAATAACTTCGTTCACGGTACTGACGAAGGTGACTGCCAGGTCTACTGCCGCAACACCAACCGCTACGCTCGAATGAACAGCTACTCATTCGGCTACGGCATCGGTGGCTACGACAACCAGCCTGCTTCGTACAATCACCAGCTCTACGACAACTCGTGGTACGACATCAACCGTGCTCTGACCTTCACCGGTATCTCGGTGACTGGCTACTCTGGTACGAAATCCGGTCGTGTCGATATCGTGGCTCACGACGAAACCATCGTCAAGTGCGCGTCCGGTATCCGTATTGACCGTCCGACATCTGGTATCTTCAGAGGCTTCGTCTTTCATAACGTGACGAGACCTGTTGATCGAGTGCTTACGACTCTGCCTCCTGGCGGTGAGGTTCAGGCATTCATCTCTGACAGTCACTACACGTACAATGGATCGATCCTCGTACCTCCGACTGTAACGACTCATGCTGTTATCACTGGTGATCGAACCGTCGGTTCTGAACTGACTGGTCCGAACAGCGTCTTCGATACGACAGCGGTGCTGACTGCATTTCCAGGTGCTGTGATCACTCGTTCGTATCAGTGGCGTCGACACAAGCCTCAAGTCCAGTGGGCTGGATGGTCTCAGCATCTCGGCTGGAAGTGCGAATGGATCGCTGGTGCAACGTCTGCGAGCTACACGATCACAGATGACGATCAAGGTTGCCTCATCAGTCGTGTCGATCGTATTCATCTGTCGTTCACTGAAGCGAGTGTCGCGAAGGTTGTCACGGCTCTCTCGTATGACGCATCCTACGCAACTTCGACTCCGATCCCTCGCAGTGGTGATCTTGCTGTTCCGCTTCCGGTCATTCCGTCGTCTGGAACAGTCTCGTTCGCTGCAGCAGAAGGTGCAGTGGCTCTCAATCTTCCTGCTCTCATCACAGGCGAGACTCGGACACTGCTCAATCCTTCGAGAGCTCATGAAGTCTACACCGGCAACTTGCTGACTGTCGACTCCAACGGAGACATCTTGAAAGGAGCTGGCACGTTCACTCTCGGACAGACGTTCGGTATGAAGCTGCGCCAGAAACGAGGCATCGATACTGTCGATAGCACGATCTCCTTCACGGTCGTAGCGTAA

Tertiary structure

PDB ID
9ef8d201b4d93e802b256328331eaaab60f10bcbf9aa4cebd92f78fe7b12e32d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6503
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Rhizobium leguminosarum phages from western Canadian soils and complete genome sequences of rhizobiophages vB_RleS_L338C and vB_RleM_P10VF Restrepo-Cordoba,M., Halmillawewa,A.P., Perry,B., Hynes,M.F. and Yost,C.K. 2015-09-16 — GenBank