Protein

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Genbank accession
XCO42245.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MGFYAGRIGDKKVLSLTSGNNKDVNNHTNPGWDTIFHSDMPHVVVLETHERDLWDGGDWYRCTRMPDRIIQVLSADYDRVVLTEVEFEDGTRRFIYGTSLGVGAKAYNAYFSNTVGSQASAGTMASMKTNVCASADLHMDVSFYFEETPGTINEKLRDGTGCMYTWGVNSEWGDRGPGPPVGQPIRPNFQTIIKAGWVLYRGAFPGNIVSGSITAPNRPLTIGADAMRHPWMRTTGVNSICLRGETLNRNIYGHMGPRYGKSSNPVGGPYSHNIQTESYQEIEYKAGFFRGPPNNFMGWENTDNNNAGSGWGNNAIYRDNNWRVPKRVRWYITNMKYNGQGFYAEDVFGSRNQEIKISPREFIVNGINLMNTGWKFINQNDINYSPGNRPDIRVIATNVARFNGDATIGNNGYTQFNQPLTRPDNSAEFGQGNVSAMHVTTVGVYNFRSDAQWYVKSNPPEIGNQWGPVWSEATRPLRLVGGTGFADIGGNLRTSGNASHHLATLWLGINNSRNGACVVTLDWKNDEWIAAAGIGCYNPLEDLTQWSEVDSRLRIFGNHFQKRVHQIMCLPVNMCVPFHFIRGTVVQCGVIPGNNAMQMKAMWAPATTNSATQGDYAITYWLVARADGSVEVWVNTEMANIMNMRVILPDVRIAVQRLA
Physico‐chemical
properties
protein length:659 AA
molecular weight: 73463,62840 Da
isoelectric point:7,99867
aromaticity:0,10926
hydropathy:-0,42595

Domains

Domains [InterPro]
IPR059609
RBD
1–659
IPR059609
XCO42245.1
1 659
Architecture
RBD
RBD 1-659
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO42245.1
1 659
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0045
Central domain 11 231 222 0,6200
C-terminal 232 659 427 0,9158
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-231
C-terminal
232-659

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146058
[NCBI] 		3232236 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO42245.1 [NCBI]
Genbank nucleotide accession
PP889506 [NCBI]
CDS location
range 107688 -> 109667
strand +
CDS
ATGGGCTTTTATGCAGGAAGGATAGGCGACAAGAAAGTATTGTCTCTCACCTCTGGCAACAATAAAGACGTCAATAACCATACAAATCCAGGTTGGGATACTATATTCCATAGTGATATGCCTCACGTTGTAGTTTTAGAAACTCACGAAAGAGACCTCTGGGATGGTGGTGATTGGTATCGTTGTACTAGAATGCCAGACAGGATTATTCAGGTACTGTCCGCAGACTACGACAGAGTTGTCTTAACTGAAGTTGAGTTTGAGGACGGTACTAGACGTTTCATTTACGGTACTTCTCTAGGCGTTGGCGCTAAAGCGTATAACGCTTACTTCAGTAATACTGTCGGTTCCCAGGCTTCTGCAGGTACTATGGCTAGTATGAAGACTAACGTTTGTGCTTCTGCTGATCTGCATATGGATGTTAGTTTCTATTTTGAGGAAACTCCAGGTACTATTAATGAGAAGTTGCGTGATGGTACTGGGTGTATGTACACCTGGGGAGTAAACTCCGAGTGGGGTGACAGGGGTCCTGGGCCGCCGGTTGGTCAGCCTATACGACCAAATTTCCAGACAATCATTAAAGCTGGTTGGGTACTCTATAGGGGAGCTTTCCCAGGTAATATAGTAAGTGGTTCGATAACTGCACCTAACAGACCTCTTACCATCGGTGCAGATGCAATGCGTCATCCTTGGATGCGTACTACTGGGGTTAACAGTATATGTTTACGTGGGGAGACCCTCAATCGTAACATATACGGACACATGGGTCCTAGATACGGTAAAAGCTCTAACCCGGTAGGTGGGCCGTACTCACATAATATCCAGACTGAATCTTATCAAGAGATTGAATATAAAGCTGGTTTCTTCCGTGGGCCTCCCAACAATTTTATGGGCTGGGAGAACACTGATAATAATAATGCTGGTAGTGGTTGGGGTAACAACGCTATTTATAGGGATAACAACTGGAGAGTCCCTAAGCGTGTTCGCTGGTATATTACTAATATGAAGTACAATGGGCAGGGGTTCTATGCAGAGGACGTATTTGGCTCTCGCAACCAAGAGATTAAAATCAGCCCTCGAGAGTTTATTGTAAACGGTATAAACCTAATGAACACCGGGTGGAAGTTTATAAACCAGAACGATATAAACTACAGCCCAGGTAATAGACCGGACATCAGGGTTATTGCAACTAATGTTGCTAGATTTAATGGGGATGCTACTATTGGTAATAATGGGTACACCCAATTCAACCAGCCGCTGACTCGACCGGATAATAGTGCCGAATTTGGGCAGGGTAACGTTAGTGCTATGCACGTAACCACAGTTGGGGTATACAACTTTAGGTCTGATGCTCAATGGTACGTTAAATCCAATCCACCGGAGATTGGAAATCAATGGGGTCCCGTATGGTCTGAGGCAACTCGACCTCTCCGCCTAGTAGGTGGTACCGGCTTCGCTGATATTGGGGGGAACCTACGTACTAGCGGTAACGCCAGCCATCATCTAGCTACCTTATGGTTAGGGATTAATAACTCTAGAAATGGAGCTTGCGTCGTCACTCTAGACTGGAAAAACGATGAGTGGATTGCTGCTGCAGGGATTGGATGTTATAACCCTCTAGAAGATCTTACCCAGTGGAGCGAGGTAGATAGTAGGCTGAGAATTTTTGGAAACCACTTCCAGAAACGTGTGCATCAAATCATGTGTTTACCTGTTAACATGTGTGTGCCCTTTCACTTTATTCGTGGTACGGTAGTCCAATGTGGGGTTATTCCTGGGAACAACGCCATGCAAATGAAGGCCATGTGGGCGCCTGCTACTACTAACTCTGCTACTCAAGGCGACTATGCTATTACATACTGGTTGGTTGCCAGAGCTGATGGCAGTGTTGAGGTATGGGTTAACACTGAAATGGCTAATATTATGAACATGCGAGTGATTCTTCCTGATGTTAGGATTGCTGTGCAAAGGCTTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ed1120dd54e5c764f8cd87faac227d467e11e4ceb6dc5620392f653cc1438c7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2293
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank