Protein

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Genbank accession
YP_010357265.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
Protein sequence
MVLTLVGCSIDKDPQTIVIEGIDGSSSLVRWSQEPIGSNCDNGGIRLQFGLDLDFSGSLSDDEVTSTTFVCNGINGADGASTLVTVEPVNGDDEYSNGGVKINTGYDLNGNGVLEENEVAYSEFVPNGADGSDGADGSDGSTALVNTTIISEGEEYEGTVYVSGGFIFTSGLDLNSNGLLDESEITETKIVENGVDGKSLAFSVEVVEESEECPTGGLILYLGLDQDGDGLLTGSEISDGQGFPICNGLNGADGEDGFTSLSESSYFENQIGSGVITYTGLDRNNNGTLDEDEVTGSFVIYNGLDGQDGADGSDGADGSDGADGEDGADGFTTLFKFLSTPTGTLISSGLDNGDGLLGTAYDGILSLTEVDNLTFVSNGVDGIDGLDGQDGEDGKTVITRTNKVDGVTTVEFGYIIDGEFELIDSITINDGTNGEDGSDGADGEDGSDGEDGVDGMPSFVEVTDLPCDPSVCANGGIRVSAGYDLDNSGTLEGSEILSTKVICNGNNGLNGQDGEDGQDGVDGEDGADGVCPECDFEENCKEGTVIICHKEGNTKTQLELTFPQYIQHVYEVHNGNSTQNDSFGPCYTPTEICVKKWVCTGHSSSSWGTSYHSNEESSNCNRGSWVRYNVIPETEADYNFWFNEYIHKHGTSSTPCK
Physico‐chemical
properties
protein length:657 AA
molecular weight: 68629,44420 Da
isoelectric point:4,05003
aromaticity:0,07154
hydropathy:-0,40152

Domains

Domains [InterPro]
IPR055575
STR
27–71
IPR055575 IPR055575 PTHR24637
IPR055575
STR
35–71
IPR055575 IPR055575 IPR018247 IPR055575 DC_2147
YP_010357265.1
1 657
Architecture
STR
STR
STR
STR
RBD
STR 27-71 | STR 83-125 | STR 154-189 | STR 460-503 | RBD 530-657
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010357265.1
1 657
Domain Start End Length (AA) Confidence
N-terminal 1 537 537 0,9842
Central domain 538 646 110 0,1281
C-terminal 647 657 10 0,9712
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-537
Central
538-646
C-terminal
647-657

Taxonomy

  Name Taxonomy ID Lineage
Phage Maribacter phage Colly_1
[NCBI] 		2745691 Uroviricota > Caudoviricetes > Molycolviridae > Mollyvirus colly >
Host Maribacter forsetii
[NCBI] 		444515 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010357265.1 [NCBI]
Genbank nucleotide accession
NC_062752.1 [NCBI]
CDS location
range 6956 -> 8929
strand +
CDS
ATGGTACTAACCCTTGTTGGGTGTAGTATTGACAAAGACCCTCAGACAATTGTCATAGAGGGGATCGATGGGTCGTCCTCCCTTGTAAGGTGGTCTCAAGAACCAATCGGTAGTAATTGTGACAACGGAGGAATCCGTTTACAATTCGGTTTGGATTTAGACTTTAGCGGAAGCTTGTCTGATGATGAAGTGACCTCAACCACTTTTGTTTGTAACGGGATTAATGGAGCCGACGGTGCTTCTACCCTAGTTACGGTTGAACCAGTTAACGGAGACGATGAGTACTCTAATGGTGGTGTTAAAATTAATACGGGTTACGACCTTAATGGTAACGGTGTTCTAGAAGAGAACGAAGTAGCCTACAGTGAGTTTGTTCCTAACGGGGCTGACGGCTCAGATGGAGCTGACGGTTCGGATGGGTCAACCGCTTTAGTTAACACAACTATAATTAGTGAGGGTGAGGAATACGAGGGGACAGTTTATGTCTCTGGTGGTTTCATCTTTACTTCAGGACTTGACTTGAATAGTAACGGTTTATTAGATGAGTCTGAAATAACTGAAACTAAAATTGTTGAAAACGGGGTTGACGGTAAGTCTCTTGCTTTCTCTGTTGAAGTTGTTGAAGAATCTGAAGAGTGCCCTACTGGTGGACTTATCCTTTACTTAGGACTTGATCAAGACGGTGACGGCTTACTTACTGGGTCTGAGATATCTGACGGACAAGGCTTCCCTATCTGTAATGGGCTTAATGGCGCTGACGGAGAAGACGGGTTTACTTCTTTAAGTGAATCTTCCTACTTTGAAAATCAAATCGGGTCTGGTGTTATAACCTATACAGGACTAGACAGGAATAATAACGGAACCTTAGATGAGGATGAAGTTACTGGTTCTTTTGTTATCTACAATGGACTTGACGGTCAAGACGGGGCTGATGGCTCAGATGGAGCTGACGGTTCGGATGGCGCTGACGGAGAAGACGGTGCTGATGGTTTTACAACTTTGTTTAAATTCCTTTCTACTCCTACTGGTACTCTGATATCTTCAGGTTTAGATAATGGTGATGGACTTTTAGGAACTGCTTATGACGGAATCCTATCCTTAACTGAAGTAGATAACCTTACGTTTGTCTCTAATGGAGTTGACGGTATAGATGGACTTGACGGTCAAGACGGGGAAGATGGTAAAACAGTAATAACTCGAACTAATAAAGTGGACGGTGTAACTACAGTTGAATTTGGTTATATAATTGACGGGGAGTTTGAGCTAATAGACTCTATAACAATTAATGACGGAACTAACGGAGAAGACGGCTCAGATGGAGCTGACGGTGAAGATGGTTCTGATGGAGAAGACGGAGTTGATGGTATGCCAAGCTTTGTTGAAGTAACTGACTTACCTTGTGATCCTTCAGTATGCGCTAACGGAGGTATCCGAGTTTCTGCTGGTTATGATTTAGATAATAGCGGAACTCTTGAAGGGTCTGAAATCCTTAGTACTAAAGTTATCTGCAATGGTAACAACGGATTGAATGGTCAAGATGGAGAAGACGGTCAGGACGGAGTTGATGGTGAAGATGGAGCTGACGGGGTTTGTCCTGAATGTGACTTTGAAGAAAACTGTAAGGAAGGAACTGTTATAATCTGCCATAAAGAGGGTAACACTAAAACCCAACTTGAATTGACGTTCCCTCAGTACATCCAACACGTTTACGAAGTTCATAATGGTAATAGTACTCAGAATGACTCTTTCGGTCCATGTTACACTCCTACAGAGATTTGTGTTAAGAAGTGGGTTTGTACAGGACATAGCTCAAGCTCTTGGGGTACTTCATATCACTCTAACGAAGAATCTTCTAATTGTAATAGAGGTAGTTGGGTTAGATATAATGTGATTCCTGAAACTGAAGCTGACTACAACTTCTGGTTCAATGAGTATATCCACAAACACGGAACAAGCTCAACTCCTTGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
16ef2934c9458377f29fca03ccb6328f91113e40930a82fe50f32ba8876f69d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5575
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Highly diverse flavobacterial phages as mortality factor during North Sea spring blooms Bartlau,N., Wichels,A., Krohne,G., Adriaenssens,E.M., Heins,A., Fuchs,B.M., Amann,R. and Moraru,C. 2021 — GenBank