Protein

View in Explore
Genbank accession
YP_010357265.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence Phold
Probability 1,00
Protein sequence
MVLTLVGCSIDKDPQTIVIEGIDGSSSLVRWSQEPIGSNCDNGGIRLQFGLDLDFSGSLSDDEVTSTTFVCNGINGADGASTLVTVEPVNGDDEYSNGGVKINTGYDLNGNGVLEENEVAYSEFVPNGADGSDGADGSDGSTALVNTTIISEGEEYEGTVYVSGGFIFTSGLDLNSNGLLDESEITETKIVENGVDGKSLAFSVEVVEESEECPTGGLILYLGLDQDGDGLLTGSEISDGQGFPICNGLNGADGEDGFTSLSESSYFENQIGSGVITYTGLDRNNNGTLDEDEVTGSFVIYNGLDGQDGADGSDGADGSDGADGEDGADGFTTLFKFLSTPTGTLISSGLDNGDGLLGTAYDGILSLTEVDNLTFVSNGVDGIDGLDGQDGEDGKTVITRTNKVDGVTTVEFGYIIDGEFELIDSITINDGTNGEDGSDGADGEDGSDGEDGVDGMPSFVEVTDLPCDPSVCANGGIRVSAGYDLDNSGTLEGSEILSTKVICNGNNGLNGQDGEDGQDGVDGEDGADGVCPECDFEENCKEGTVIICHKEGNTKTQLELTFPQYIQHVYEVHNGNSTQNDSFGPCYTPTEICVKKWVCTGHSSSSWGTSYHSNEESSNCNRGSWVRYNVIPETEADYNFWFNEYIHKHGTSSTPCK
Physico‐chemical
properties
protein length:657 AA
molecular weight: 68629,44420 Da
isoelectric point:4,05003
aromaticity:0,07154
hydropathy:-0,40152

Domains

Domains [InterPro]
IPR055575
27–71
IPR055575 IPR055575 PTHR24637
IPR055575
154–189
IPR055575 IPR018247 IPR055575
YP_010357265.1
1 657
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Maribacter phage Colly_1
[NCBI] 		2745691 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010357265.1 [NCBI]
Genbank nucleotide accession
NC_062752.1 [NCBI]
CDS location
range 6956 -> 8929
strand +
CDS
ATGGTACTAACCCTTGTTGGGTGTAGTATTGACAAAGACCCTCAGACAATTGTCATAGAGGGGATCGATGGGTCGTCCTCCCTTGTAAGGTGGTCTCAAGAACCAATCGGTAGTAATTGTGACAACGGAGGAATCCGTTTACAATTCGGTTTGGATTTAGACTTTAGCGGAAGCTTGTCTGATGATGAAGTGACCTCAACCACTTTTGTTTGTAACGGGATTAATGGAGCCGACGGTGCTTCTACCCTAGTTACGGTTGAACCAGTTAACGGAGACGATGAGTACTCTAATGGTGGTGTTAAAATTAATACGGGTTACGACCTTAATGGTAACGGTGTTCTAGAAGAGAACGAAGTAGCCTACAGTGAGTTTGTTCCTAACGGGGCTGACGGCTCAGATGGAGCTGACGGTTCGGATGGGTCAACCGCTTTAGTTAACACAACTATAATTAGTGAGGGTGAGGAATACGAGGGGACAGTTTATGTCTCTGGTGGTTTCATCTTTACTTCAGGACTTGACTTGAATAGTAACGGTTTATTAGATGAGTCTGAAATAACTGAAACTAAAATTGTTGAAAACGGGGTTGACGGTAAGTCTCTTGCTTTCTCTGTTGAAGTTGTTGAAGAATCTGAAGAGTGCCCTACTGGTGGACTTATCCTTTACTTAGGACTTGATCAAGACGGTGACGGCTTACTTACTGGGTCTGAGATATCTGACGGACAAGGCTTCCCTATCTGTAATGGGCTTAATGGCGCTGACGGAGAAGACGGGTTTACTTCTTTAAGTGAATCTTCCTACTTTGAAAATCAAATCGGGTCTGGTGTTATAACCTATACAGGACTAGACAGGAATAATAACGGAACCTTAGATGAGGATGAAGTTACTGGTTCTTTTGTTATCTACAATGGACTTGACGGTCAAGACGGGGCTGATGGCTCAGATGGAGCTGACGGTTCGGATGGCGCTGACGGAGAAGACGGTGCTGATGGTTTTACAACTTTGTTTAAATTCCTTTCTACTCCTACTGGTACTCTGATATCTTCAGGTTTAGATAATGGTGATGGACTTTTAGGAACTGCTTATGACGGAATCCTATCCTTAACTGAAGTAGATAACCTTACGTTTGTCTCTAATGGAGTTGACGGTATAGATGGACTTGACGGTCAAGACGGGGAAGATGGTAAAACAGTAATAACTCGAACTAATAAAGTGGACGGTGTAACTACAGTTGAATTTGGTTATATAATTGACGGGGAGTTTGAGCTAATAGACTCTATAACAATTAATGACGGAACTAACGGAGAAGACGGCTCAGATGGAGCTGACGGTGAAGATGGTTCTGATGGAGAAGACGGAGTTGATGGTATGCCAAGCTTTGTTGAAGTAACTGACTTACCTTGTGATCCTTCAGTATGCGCTAACGGAGGTATCCGAGTTTCTGCTGGTTATGATTTAGATAATAGCGGAACTCTTGAAGGGTCTGAAATCCTTAGTACTAAAGTTATCTGCAATGGTAACAACGGATTGAATGGTCAAGATGGAGAAGACGGTCAGGACGGAGTTGATGGTGAAGATGGAGCTGACGGGGTTTGTCCTGAATGTGACTTTGAAGAAAACTGTAAGGAAGGAACTGTTATAATCTGCCATAAAGAGGGTAACACTAAAACCCAACTTGAATTGACGTTCCCTCAGTACATCCAACACGTTTACGAAGTTCATAATGGTAATAGTACTCAGAATGACTCTTTCGGTCCATGTTACACTCCTACAGAGATTTGTGTTAAGAAGTGGGTTTGTACAGGACATAGCTCAAGCTCTTGGGGTACTTCATATCACTCTAACGAAGAATCTTCTAATTGTAATAGAGGTAGTTGGGTTAGATATAATGTGATTCCTGAAACTGAAGCTGACTACAACTTCTGGTTCAATGAGTATATCCACAAACACGGAACAAGCTCAACTCCTTGTAAATAA

Tertiary structure

PDB ID
16ef2934c9458377f29fca03ccb6328f91113e40930a82fe50f32ba8876f69d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5575
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Highly diverse flavobacterial phages as mortality factor during North Sea spring blooms Bartlau,N., Wichels,A., Krohne,G., Adriaenssens,E.M., Heins,A., Fuchs,B.M., Amann,R. and Moraru,C. 2021 — GenBank