Protein

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Genbank accession
ATS92277.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSVIKGTANGHYDFLNQLQAILCDAGHAWNKSYTGTGNGRITGMNEESGGYVGGPDSIAETFTITATSPTQFSVEGSVSGVIGTTAVNVAFNHAKLKFRIVPGTTAFVAGDKFILNTTPKWQLVRRIGTRGSAYRPSDMVNSQNLWSTDQEYASKPAAQLPAHAGIQLIKEEVVGQFVIRAYNGSGNFTPKSFDLQYSDDGVNYTTAQSWADVVIASNEAKAFDVTEAVTPHLYWRLRFKTTAVDNVEVRVAALEFRRSAGDTFTISGGAEVLFKAPGLGGLESILVGCELYESVSSAVYNLNWYAPRNFDDKKRLRNMLPSSGFVGTPMTNQSFNFWVFVNGQRVIIVCRIGSVYIGGYFGFGNPYEIQTNHQYPMILGGCTDEEATRFDTTNAENRIYCNPGRWTLRAFYPASGWVRHANLREVGNNVAAGSGVEDGKVFPAAMVGSGDVRYLYRDNVDGSLPMFPSVIGGANPRHMWGEFDGVYWTTGFNNLPEAIITREGFDHMVFQDMFRTTYQDYYAVRMD
Physico‐chemical
properties
protein length:527 AA
molecular weight: 58033,32870 Da
isoelectric point:5,90747
aromaticity:0,12524
hydropathy:-0,22372

Domains

Domains [InterPro]
DC_1928
ATT
1–134
DC_1928 IPR008979 DC_0072
G3DSA:2.60.120.260
STR
131–258
G3DSA:2.60.120.260
G3DSA:2.60.120.260
STR
131–260
G3DSA:2.60.120.260
ATS92277.1
1 527
Architecture
ATT
STR
ATT 1-134 | STR 135-527
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATS92277.1
1 527
Domain Start End Length (AA) Confidence
N-terminal 1 101 101 0,1912
Central domain 102 300 200 0,2883
C-terminal 301 527 226 0,9953
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-101
Central
102-300
C-terminal
301-527

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage vB_SmaS_DLP_5
[NCBI] 		2044561 Uroviricota > Caudoviricetes > Delepquintavirus >
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATS92277.1 [NCBI]
Genbank nucleotide accession
MG189906 [NCBI]
CDS location
range 14965 -> 16548
strand +
CDS
ATGAGCGTTATCAAGGGAACGGCCAACGGGCACTACGATTTCCTGAACCAGTTGCAGGCGATCCTGTGTGATGCTGGCCATGCGTGGAACAAGTCGTACACCGGAACCGGTAATGGCCGTATCACCGGCATGAATGAAGAGTCTGGTGGATACGTTGGTGGGCCTGACTCCATCGCGGAGACCTTCACGATTACTGCCACCAGCCCCACCCAGTTTTCGGTGGAAGGTTCGGTGTCGGGTGTGATTGGGACCACGGCGGTGAATGTGGCGTTCAACCACGCGAAGCTGAAGTTCCGCATTGTGCCGGGAACCACGGCCTTCGTTGCCGGTGACAAGTTCATCCTGAACACCACCCCGAAGTGGCAGTTGGTGCGGCGCATCGGCACCCGGGGATCGGCTTACCGTCCTTCGGACATGGTGAACTCGCAGAACCTGTGGTCTACGGATCAGGAGTATGCGAGCAAGCCCGCCGCCCAGCTTCCGGCCCATGCTGGCATCCAGTTGATCAAAGAAGAGGTGGTGGGGCAGTTCGTGATCCGGGCCTACAACGGCAGCGGAAACTTCACTCCGAAGTCGTTCGACCTTCAGTATTCGGATGATGGTGTGAACTACACGACGGCCCAGAGCTGGGCGGACGTGGTGATCGCCTCGAACGAAGCCAAGGCTTTCGACGTGACGGAGGCGGTGACCCCGCACTTGTACTGGCGGCTGCGGTTCAAGACCACGGCGGTGGACAATGTTGAAGTGCGCGTGGCGGCTCTGGAGTTCCGGCGCAGCGCAGGTGACACCTTCACCATCTCCGGAGGGGCGGAAGTCCTGTTCAAGGCCCCGGGTCTGGGTGGGTTGGAGTCGATCTTGGTGGGCTGCGAGCTGTACGAAAGTGTGTCCAGTGCGGTGTACAACCTGAACTGGTATGCGCCCCGCAACTTCGATGACAAGAAGCGGCTGCGGAACATGCTGCCGTCTTCGGGTTTTGTCGGCACTCCGATGACGAACCAGTCGTTCAACTTCTGGGTGTTCGTGAATGGCCAGCGGGTGATCATCGTGTGCCGTATCGGTTCGGTGTACATCGGAGGCTACTTCGGCTTCGGCAACCCGTATGAAATCCAGACCAACCATCAGTACCCGATGATTCTGGGCGGCTGTACGGACGAAGAGGCGACGCGGTTCGATACGACCAATGCGGAGAATCGCATCTACTGCAACCCGGGACGGTGGACGCTGAGGGCGTTCTACCCGGCATCGGGGTGGGTGCGACATGCGAACCTGCGGGAAGTCGGCAACAACGTCGCAGCTGGTTCGGGTGTGGAGGACGGAAAGGTATTCCCGGCAGCGATGGTGGGCAGCGGGGATGTGCGCTACCTGTACCGTGACAACGTAGACGGAAGCCTGCCGATGTTCCCCAGTGTGATCGGTGGAGCCAACCCCCGGCACATGTGGGGCGAGTTCGACGGGGTGTACTGGACCACTGGATTCAACAACCTCCCGGAGGCGATAATTACCCGTGAGGGCTTCGACCACATGGTGTTCCAAGACATGTTCCGCACCACCTACCAAGACTACTACGCAGTGAGGATGGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e71a80ac8aaddb908bb7fa8eea3930d2a671b1a7bd5089277e3d927f9200c9a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6793
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lysogenic conversion of Stenotrophomonas maltophilia by temperate phage DLP4 Dennis,J. and Stothard,P. 2019-04-16 — GenBank