Protein

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Genbank accession
AAP74527.1 [GenBank]
Protein name
putative protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTVFKDINNKEYVADTEIKLTEGVNGEKSLTGTIYFGNDVKKNLAKGWTMVFNDEEYAVVTFRYNDTDNTVSFSAVQMFFYTLSIKAFHEKWNGSHPLNEYLNAIFKDTGYSYNNETSTAAFEKENWGLKDKLTLFNDIINQISAEFEVQGTTVYIKDKIGSDLSTVVRQGFNLSTAEIETDNSSFATYGVGYGAHDNVDDQTSPRLSVEYYSPLYDMYKAKFGTIEAEPVDDERYTIADNLLAAVKAKVDNSWSLAITVSLLDLQNAGYPYAMASAGDSITIVDESLGFEDEVRIIKVVSSYNINGERISVDVTCGDLTMAQTQSASSSVATSTITDIINGNSVLPDAWFSEQMQLATNSILDARTELKFTDQGIIAIDKSDHNKMVILNSAGIGVSTDGGQTFKTAITAESIDGQNINIKNLNASNIVGGIINGITYNTVDDETNFRISLQKGMMEYYYNDDLLGGIYATGDVATGKVNGFAIWNHPGYIFSINQANDAGDQSKAVFQIPITSTMDDPKYNLYGYALSDIATKSSLYSAKDIYTDGNIIGQSDSAFWIKNSNQVIISGNGGKGNQLNVYGDHVDVLGDFTVYNGTKNAASVTRDGVRATPAYEMAENWFGDMGESTTDGNCEITVPVDPIFGDIVNTSVKYQVFLQSYSSAHVWVDERNEDGFVVKSDQPNAKFAWELKAKRRGYENNRLVKTDMTLSDVQKIEEGNGTMSNDEYKEYKGGNVDGN
Physico‐chemical
properties
protein length:738 AA
molecular weight: 81221,73990 Da
isoelectric point:4,44171
aromaticity:0,10569
hydropathy:-0,36138

Domains

Domains [InterPro]
G3DSA:3.55.50.40
79–161
G3DSA:3.55.50.40
IPR010572
81–301
IPR010572
AAP74527.1
1 738
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage phiJL-1
[NCBI] 		2892345 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAP74527.1 [NCBI]
Genbank nucleotide accession
AY236756 [NCBI]
CDS location
range 19871 -> 22087
strand +
CDS
ATGACGGTGTTCAAAGATATTAATAATAAAGAATACGTCGCTGATACTGAAATCAAGCTAACTGAAGGCGTTAATGGTGAGAAGTCACTAACGGGAACGATTTATTTTGGTAATGACGTAAAGAAAAATCTTGCTAAGGGCTGGACGATGGTATTCAATGATGAAGAATATGCTGTCGTTACATTTAGATATAATGATACAGATAACACGGTATCTTTTTCAGCCGTTCAAATGTTTTTTTACACGTTAAGTATTAAGGCATTTCATGAAAAATGGAATGGATCACACCCGTTAAACGAATATTTAAACGCTATTTTTAAAGATACTGGCTATTCATACAACAACGAAACGTCGACAGCAGCGTTTGAAAAAGAAAATTGGGGGTTGAAAGACAAGTTAACCCTATTCAATGATATTATCAATCAAATTTCGGCCGAATTTGAAGTGCAGGGCACTACCGTTTATATCAAAGATAAAATTGGATCTGATCTATCAACTGTTGTTCGCCAAGGATTCAACCTATCAACGGCTGAAATCGAAACCGACAACAGCTCGTTCGCTACTTACGGTGTAGGATATGGTGCACACGATAACGTTGACGACCAGACATCACCGCGGTTATCAGTTGAATATTACAGTCCGTTGTATGATATGTATAAAGCTAAATTTGGAACTATTGAAGCTGAACCAGTTGATGATGAGCGCTACACAATTGCTGATAATTTGTTAGCCGCGGTTAAGGCTAAGGTTGACAATAGCTGGAGTTTGGCAATTACCGTATCATTGTTAGATTTACAAAATGCTGGTTATCCGTATGCCATGGCTAGTGCTGGCGATTCAATTACAATTGTAGACGAATCGCTAGGATTTGAAGATGAAGTGCGTATTATTAAAGTTGTCAGTTCGTATAATATCAACGGCGAACGTATTTCGGTTGATGTAACGTGTGGTGACCTAACTATGGCGCAGACACAATCAGCTAGTTCGTCAGTCGCCACCAGTACAATCACAGACATTATCAATGGCAATTCTGTGCTACCTGACGCCTGGTTCAGTGAACAGATGCAATTGGCCACTAACAGTATTTTAGATGCTAGAACAGAATTGAAGTTCACCGACCAAGGGATTATCGCTATTGATAAAAGTGATCACAACAAAATGGTTATTTTAAATTCTGCTGGTATCGGCGTGTCAACAGATGGCGGCCAGACATTTAAAACAGCGATCACGGCAGAATCGATTGACGGACAAAACATTAACATCAAAAACCTTAACGCCAGCAACATTGTCGGCGGTATTATTAACGGTATCACTTATAATACGGTTGACGATGAAACAAATTTCAGAATTTCATTGCAAAAAGGTATGATGGAATACTACTATAATGATGATCTTTTAGGCGGTATTTATGCTACTGGTGACGTAGCTACTGGCAAGGTTAACGGTTTTGCTATCTGGAACCACCCTGGATATATCTTTAGTATTAACCAGGCAAACGATGCCGGTGATCAATCAAAAGCTGTTTTTCAAATTCCAATCACTTCTACAATGGATGATCCTAAATACAATTTATACGGGTATGCATTAAGTGATATTGCAACTAAAAGTAGTTTATACTCGGCTAAAGATATTTATACTGATGGTAATATCATCGGCCAAAGTGATAGTGCTTTCTGGATTAAAAACTCTAACCAAGTTATTATTAGCGGTAACGGTGGTAAAGGAAACCAACTGAACGTTTACGGTGATCACGTTGATGTTTTAGGCGACTTTACTGTGTACAATGGTACCAAGAACGCGGCCAGCGTTACGCGTGACGGTGTGCGTGCTACGCCTGCGTATGAAATGGCAGAAAACTGGTTCGGCGATATGGGAGAATCAACCACCGATGGTAATTGTGAAATCACTGTACCAGTTGATCCGATATTCGGTGATATTGTTAACACCAGTGTTAAATATCAAGTGTTTTTACAAAGCTATAGTAGTGCACATGTTTGGGTTGATGAACGCAATGAAGATGGATTCGTTGTAAAATCCGATCAACCAAACGCAAAATTTGCTTGGGAGTTGAAAGCCAAAAGACGTGGATATGAAAACAATCGGCTGGTTAAAACTGATATGACATTATCAGACGTGCAGAAGATTGAAGAAGGAAATGGTACAATGAGTAATGACGAATACAAAGAATATAAAGGTGGTAATGTAGATGGCAATTAG

Tertiary structure

PDB ID
17173b921f5d5db992a7479ecee617768988550f5578089d5c94441ea6632ffe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7422
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a Lactobacillus plantarum bacteriophage, phiJL-1, from a cucumber fermentation Lu,Z., Breidt,F. Jr., Fleming,H.P., Altermann,E. and Klaenhammer,T.R. 2003 12781945 GenBank
Sequence analysis of the Lactobacillus plantarum bacteriophage PhiJL-1 Lu,Z., Altermann,E., Breidt,F., Predki,P., Fleming,H.P. and Klaenhammer,T.R. 2005 15777728 GenBank