Protein

View in Explore
Genbank accession
YP_009790378.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALYREGKAAIAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTNGAVVASTDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKSFDFDSLQNLANQIKADSEAAGVSATAAAASESAAKTSETNAKESEVAVETTRDQVQQIINDAGEQSTLVVLAQPQGAGKSGMLQGGTVQDALKSCVSVFAHGAKGDFNPTTKTGTDDTQAFKDAISYAISHGLRNVYVPSGHYLITDELNIGGQSFISGEGNRDYWRGGVDGVHIFGDGPYSTILVFDPPTANTPCLSARGGWGTHSPRAISQLAIEPLNWADYSSTAEGTGILLHGCCFVPVTDVHIGRFHRGIHLWNELQGPDDTANTFTKGDFTEFNRMTRVRIFNSDIGADYHVTKGNNSFHGNSWADCMIQINSYGGIGIRMWDDGTRAGVVAPTNPYYQYIANVYSNNFDINFFGSDARTCYLLSLIRAQGRGCSGTMTVEAAVTLKTDSYEWFQSFGSLHSISAINVSAGNTDTATRPVAFMWNNAAYPQNFFDGVDPVLLPGSYPRQFDLNNGGNTGMDLLNIRGAQTGNAWSQQQSSVSVGWLFTVRSQSGSRPAQRTVWQFSYDGTKIKAPSADSVGLYNSTVGIDITATAAVPSATNAINLGSSSLRFNTGYFNGWNIGSAGLVPSADASVNAGSSTFRINRSYVISRYYTATVFDSAGTGSPEGVVAARIGSTYRRTDGVAGSTFYVKEAGTGNTGWVAK
Physico‐chemical
properties
protein length:765 AA
molecular weight: 81490,19980 Da
isoelectric point:5,24086
aromaticity:0,09935
hydropathy:-0,17660

Domains

Domains [InterPro]
IPR011050
207–466
IPR011050
IPR012334
209–501
IPR012334
YP_009790378.1
1 765
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KOX1
[NCBI] 		1970798 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009790378.1 [NCBI]
Genbank nucleotide accession
NC_047825.1 [NCBI]
CDS location
range 20349 -> 22646
strand -
CDS
ATGGCACTATACAGAGAAGGCAAAGCGGCTATTGCCGCAGACGGAACTGTTACCGGGACTGGCACAAAATGGCAATCATCGCTTTCGCTGATTCGCCCTGGTGCGACGATTATGTTTTTGTCGTCACCGATTCAAATGGCCGTCGTAAACAAGGTGGTAAGCGATACTGAAATTAAAGCAATTACCACAAACGGCGCTGTCGTAGCGTCTACTGACTATGCGATCCTTTTAAGCGACTCGCTGACCGTCGACGGACTGGCGCAAGATGTTGCGGAAACCCTGCGATACTATCAGTCGCAAGAAACCGTAATTGCGGATGCAGTCGAGTTCTTTAAGAGCTTTGATTTCGATTCCCTGCAAAATCTTGCCAACCAAATTAAGGCAGACTCCGAGGCTGCGGGCGTAAGCGCTACGGCTGCTGCGGCGTCTGAAAGCGCTGCAAAAACATCGGAAACCAATGCAAAAGAATCAGAGGTTGCAGTGGAGACTACAAGAGACCAAGTACAGCAGATCATCAATGATGCTGGTGAACAGTCAACGCTGGTGGTGCTGGCGCAGCCGCAAGGCGCTGGTAAGTCTGGAATGTTGCAGGGTGGAACTGTCCAGGATGCGTTAAAAAGCTGCGTTTCCGTATTCGCACATGGTGCAAAAGGTGATTTCAATCCAACGACCAAAACCGGAACAGATGACACACAGGCATTCAAGGATGCCATTTCATACGCCATAAGTCACGGATTGCGGAACGTTTACGTTCCTTCCGGTCACTACCTGATAACCGATGAATTAAATATTGGCGGACAAAGTTTCATCTCTGGTGAAGGAAATAGAGACTATTGGCGAGGGGGGGTTGACGGGGTTCACATTTTTGGCGACGGGCCATACAGCACAATACTTGTTTTCGACCCGCCAACAGCTAACACGCCATGCTTATCCGCACGCGGAGGATGGGGCACACATTCACCGCGCGCCATATCCCAACTGGCAATCGAGCCACTTAATTGGGCAGATTACAGCAGTACAGCAGAGGGAACAGGCATACTGTTGCATGGTTGCTGTTTCGTTCCTGTAACAGATGTTCACATTGGCCGGTTTCACCGTGGAATTCACTTATGGAATGAGTTACAAGGGCCGGATGATACAGCAAATACATTCACGAAAGGCGACTTTACCGAATTTAACCGCATGACGCGCGTTCGAATTTTCAATAGCGATATTGGTGCGGATTATCATGTAACCAAAGGTAATAACTCATTCCACGGCAATTCGTGGGCCGACTGTATGATTCAGATAAACTCATACGGCGGGATTGGTATTCGCATGTGGGACGATGGCACGCGAGCAGGTGTTGTTGCGCCGACAAACCCGTATTACCAGTATATTGCCAACGTCTACAGCAATAATTTTGATATTAACTTTTTTGGCAGCGATGCCAGAACATGCTACTTATTATCTCTGATTAGGGCGCAAGGGCGCGGTTGTTCAGGAACGATGACCGTTGAGGCTGCCGTCACCCTGAAAACAGATAGCTATGAATGGTTTCAGAGTTTTGGCAGCCTGCATTCGATTTCAGCAATAAATGTTAGCGCAGGAAATACAGACACAGCAACGCGCCCGGTTGCATTTATGTGGAATAACGCGGCTTATCCGCAGAATTTCTTTGATGGCGTTGACCCTGTTTTATTGCCTGGCTCTTATCCTCGGCAATTCGATCTGAACAACGGTGGCAACACTGGTATGGATTTGCTTAATATCAGGGGTGCGCAGACTGGTAACGCCTGGTCACAGCAGCAAAGTTCTGTTTCTGTTGGCTGGCTATTCACCGTAAGAAGTCAGAGCGGTTCCCGCCCTGCACAACGTACTGTATGGCAGTTTTCATATGACGGAACAAAAATTAAGGCACCGTCAGCGGATAGTGTAGGTCTGTACAATTCTACAGTGGGGATAGACATCACTGCTACGGCTGCGGTGCCATCAGCAACAAATGCCATCAATTTGGGTTCTTCATCGTTACGATTTAATACTGGTTATTTTAACGGTTGGAATATTGGTTCGGCCGGGCTTGTACCGTCTGCTGATGCCAGCGTTAACGCAGGTAGTTCAACATTCAGAATAAACCGAAGCTATGTTATTAGCCGCTACTATACGGCAACGGTATTCGATAGCGCCGGAACAGGCAGCCCGGAAGGTGTTGTGGCTGCTAGAATTGGATCAACCTATCGCCGCACTGATGGCGTAGCAGGTTCAACATTTTACGTCAAAGAAGCCGGAACAGGTAACACTGGATGGGTGGCAAAATGA

Tertiary structure

PDB ID
88ce08a015cf490352b15ac07afb441d2e450652e0f5a0a6d16bc01f9ecc50c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6660
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and formulation into solid dosage forms of a novel bacteriophage lytic against Klebsiella oxytoca - potential to design a novel therapy against antibiotic induced GI disruption Brown,T.L., Petrovski,S., Hoyle,D., Chan,M., Lock,P. and Tucci,J. 2017-08-17 — GenBank