Protein

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Genbank accession
XAG94826.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEIVYFSVGVDLGGYKVIYDKETQRAYSLPAGIASGTTAVSLNTAAVLVHSAGSVDLGALAVSREEYVTLAGTFDSGSTLNVKNELLTYTDGKYRWDGALPKAVPAGSTPASTGGVGLGAWVSVGDASLRTNLSSRYGSSFVSGIENQFFKKTTLTIQEGGNTSGFWDVVYDEVSGMWYQWTGSSTHAFAASPTTPQQSYQGWICRGTLNQFPVNDPRNFGAHSNIEFGYQDFDSTDAIQLMIDSARFLQDNAGDNWNLQFARRGYFNFGGFCYNVSRPILVQDDHVTGLRASGMRIENGGLRALPGFTPAVQKKNAAGDTRSISAFFILGAKDYGFQSGQYVSYIKIQDMSFEGNNFACDAVVWADVVAHCFMNNIEATDVKYGVTGNVVSFSQFTNWRLVNVNSAATINNTSVADGYNSGIGIEGGGNHFIGFTIIGDGFNDQGLNRFHFIYNGEFNISNVISYNGLGDFLVVSSLAGGDTGTQSKWSRLLNCEVGDLGGRIMKADYVSNLQVEINAIKCGRLLGGAAPLVQITNCDTIDIHPNFDQFYDMPSAWREVIEVVDSSRVNIHQGTIVSIPAANNLFNMIAFKGNSQRCNVAPLSSNIAGYDKMYIFPVSSEATCSAISVIGGSFVEGAFISGTPDLKGAGDSYTAVNIGASNVSDSPRASLSLSNTNTPVVTFKEQQILKENVSASGAPLLSIDFLDVGKTHCADIEVSIAASTVTGNSSYFGKFKIRFIRSIDGSGRANISPAIDAYSDGSVSTISISVTETHTQYGIVLGVSPTFGGTSAESLCNISANVKANSMYRINMHQ
Physico‐chemical
properties
protein length:844 AA
molecular weight: 90178,46540 Da
isoelectric point:5,32595
aromaticity:0,10427
hydropathy:-0,06173

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
DC_1953
STR
1–194
DC_1953
IPR040775
RBD
91–156
IPR040775
XAG94826.1
1 844
Architecture
ATT
STR
ATT 1-166 | STR 167-194 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAG94826.1
1 844
Domain Start End Length (AA) Confidence
N-terminal 1 265 265 0,9898
Central domain 266 691 427 0,9796
C-terminal 692 844 152 0,9714
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-265
Central
266-691
C-terminal
692-844

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SF02
[NCBI] 		3141821 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAG94826.1 [NCBI]
Genbank nucleotide accession
PP706106.1 [NCBI]
CDS location
range 35534 -> 38068
strand -
CDS
ATGAACGAAATGTTTAGTCAAGGTGGTAAAGGTTCAACTGGAATCTTAACCAATAAACAAGCAGTAGCCAGACACTTTGGTGTTAAACAATCTGAGATTGTTTACTTTTCGGTTGGTGTAGATTTAGGGGGGTATAAAGTTATCTATGACAAGGAAACGCAAAGAGCTTATTCCTTACCTGCTGGTATTGCTTCTGGTACTACTGCCGTCAGTCTTAATACTGCTGCTGTACTTGTACATTCAGCAGGTTCTGTAGACTTAGGTGCATTAGCTGTATCTCGTGAAGAATATGTTACCTTGGCTGGGACATTTGATTCTGGCTCTACGCTTAACGTTAAAAATGAATTACTCACTTATACAGATGGTAAGTATCGCTGGGATGGAGCATTACCTAAAGCTGTCCCTGCCGGTTCAACTCCTGCATCAACTGGTGGCGTTGGTTTAGGTGCTTGGGTTAGTGTTGGTGATGCTTCCTTGAGAACCAATCTTTCAAGTCGTTACGGGTCCTCGTTTGTGAGTGGTATTGAAAACCAATTCTTCAAAAAGACCACATTAACTATTCAGGAGGGTGGCAACACTTCTGGTTTCTGGGATGTTGTATATGACGAAGTGTCAGGGATGTGGTATCAGTGGACTGGTTCATCTACACATGCATTTGCTGCATCGCCTACCACGCCACAGCAGTCGTATCAGGGATGGATTTGTCGTGGAACATTGAATCAATTCCCAGTAAATGACCCGAGAAACTTTGGTGCTCACTCAAACATTGAATTTGGATATCAGGATTTTGATTCGACCGATGCTATTCAGTTGATGATTGATAGTGCACGTTTCCTTCAGGATAATGCTGGCGATAACTGGAACCTCCAATTTGCACGCCGTGGATATTTCAATTTTGGCGGCTTCTGCTATAACGTTTCCAGACCTATTCTAGTGCAAGATGACCACGTAACTGGTTTACGCGCGTCGGGTATGCGAATTGAAAATGGGGGACTGCGTGCTCTGCCGGGGTTTACTCCTGCTGTTCAGAAAAAGAACGCTGCTGGCGATACTCGCAGCATCAGCGCATTCTTTATCCTCGGCGCTAAAGATTACGGCTTCCAGAGTGGGCAGTATGTTTCCTATATCAAAATTCAGGATATGTCTTTTGAAGGGAATAATTTTGCTTGTGATGCGGTAGTGTGGGCCGACGTGGTTGCACATTGCTTCATGAATAATATTGAAGCTACTGATGTTAAATATGGAGTTACTGGTAATGTTGTTAGTTTCTCTCAATTCACCAACTGGCGGTTAGTTAATGTCAACTCCGCAGCTACTATTAATAACACCAGTGTTGCAGATGGATACAACTCGGGCATCGGGATTGAGGGTGGCGGAAACCACTTCATCGGGTTCACTATTATCGGTGATGGTTTCAATGACCAGGGATTAAACCGGTTCCACTTCATCTATAACGGCGAGTTCAACATCTCAAACGTTATCAGTTATAACGGTCTTGGTGATTTCCTGGTTGTAAGCTCGCTGGCGGGTGGCGATACCGGAACTCAATCTAAATGGTCGCGACTGCTGAACTGTGAAGTAGGAGACCTTGGTGGCAGAATCATGAAGGCCGATTATGTAAGTAACTTGCAGGTCGAGATTAATGCCATCAAGTGCGGAAGGTTGCTGGGTGGTGCAGCTCCATTGGTGCAGATAACAAACTGTGATACTATCGATATCCACCCTAATTTTGACCAGTTCTATGATATGCCCTCTGCATGGCGTGAAGTTATTGAGGTTGTGGATAGCTCTCGTGTTAACATTCACCAGGGAACAATCGTCTCTATCCCGGCGGCGAACAACCTCTTTAACATGATTGCGTTTAAGGGTAACAGCCAGCGATGCAACGTTGCACCGTTATCCTCTAATATCGCTGGTTACGACAAGATGTATATCTTCCCTGTATCATCTGAGGCCACCTGCTCAGCGATATCGGTAATCGGCGGCTCTTTTGTAGAAGGTGCTTTCATTTCAGGAACCCCAGACCTTAAGGGGGCGGGGGATTCTTACACTGCCGTTAATATTGGGGCAAGTAATGTTAGTGATTCTCCAAGAGCATCATTAAGCCTTTCAAATACAAATACCCCAGTTGTAACTTTTAAAGAACAGCAGATTTTAAAAGAAAACGTATCGGCTTCTGGTGCTCCTCTATTATCAATTGATTTTTTGGACGTTGGAAAAACTCATTGCGCGGATATTGAGGTTAGTATTGCAGCATCAACGGTAACAGGTAATAGTTCTTATTTTGGTAAATTTAAGATAAGATTTATCCGCAGCATTGATGGTAGCGGTAGGGCTAACATTTCTCCAGCTATTGATGCATACTCTGATGGGTCAGTTTCTACTATTAGTATATCTGTTACCGAGACGCATACTCAATATGGTATTGTATTGGGTGTTTCCCCTACATTTGGTGGGACATCAGCGGAGTCTCTCTGCAATATCTCTGCAAATGTAAAAGCAAATAGCATGTACCGTATAAATATGCACCAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7a1af72ba25acea8210e6fd2a8cc7bb0dbed640f470ed8c97fe885bf0bc2762b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6999
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and application of a novel polyvalent bacteriophage SF02 for the control of Salmonella and Escherichia coli O157:H7 in foods Hou,P.-F. 2024 — GenBank