Protein

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Genbank accession
QJT70550.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MITGSKGGSSKPYVPKEMEDNLISINKIKILLAVSDGECDPNFTLRDLYLDDVPVIADDGTVNYRGVKAEFRHGTQTQDYIRGLLTHQAKTLARDITTTNPYVISVTNKTLSAIRIKILMPTGIKQEDNGDLVGVKVTYAVDMAVDGDSYKEVLIDTIEGKTRSGYDRSRRIDLPAFNDRVLLRVRRVTADSTSSRVTDLIKLQSYAEVIDAKFRYPLTGLVYVEFDSELFLTRSTLARDITTTNPYVISVTNKTLSAIRIKILMPTGIKQEDNGDLVGVKVTYAVDMAVDGDSYKEVLIDTIEGKTRSGYDRSRRIDLPAFNDRVLLRVRRVTADSTSSRVTDLIKLQSYAEVIDAKFRYPLTGLVYVEFDSELFLTRSREYHGSWDGTFKKAWSNNPAWVLYDIITNQRYGLDQRELGVQVDKWSLYEAAQYCDQKVPDGKGGTEPRYLCDVVIQSQIEAYQLIRDICSIFRGMSFWNGESLSIVIDKPRDPSYIFTNDNVVDGDFQYTTASEKSMYTQCNVTFDDEQNMYQQDVEGVFDTEAALRFGYNPTSITAIGCTRRSEANRRGRWILKPTCAALRDTKTNLRSTTVNFATGLEGMIPSIGDVIAVSDNFYSSNLKLNLSGRVMEVSGLQVFVPFKIDARPVISLSSTSLTESQLSAQSQRVVSWDKVPYASLYEMQWRKGDGNWLNTPQTANKEIEVEGIYSGNYRPNTSLSDAVKLTGAPGSPPYQSAKLSQFLTGRCRTGSGNRSHPYRPNTSLSDAVKLTGAPGSPPYQSAKLSQFLTGRCRTGSGNRSHPYRFGIRVKWGMPEGSGDTAYIELHQSPDGTAENSSLLTLIPYPQYEYWHGTLPAGHVVWYRIRSVDRIGNVSGWTDFVRGMASDDVEAVLGNILDKIFDTEAGKDLKENAIDSANKIKDQAQSIIQNALANDADVRIMRKENGKRKAEFRQSIQLIASETEARVTAMTQLKAEFDEEITSEVTRLDQAIATESETRATAIEELKSQIGDDIQGQLTRVEEAIASETEARVSADTALTAKFGDVESALTEKLDSWAGVNGVGAQYAMKLGLTYNGQKYSAGMVMQLSNSAQGLISQILLMLEDLRSVENNQVFINSLLVKDGSINNAKIGNFIQSNNWDGNNGWHINKNGDAYLMNATVRGSLYASNGNFSFNGTNNTVVINNNGITVNLPNGGRVVVGVW
Physico‐chemical
properties
protein length:1202 AA
molecular weight: 133383,27990 Da
isoelectric point:5,58411
aromaticity:0,08319
hydropathy:-0,37646

Domains

Domains [InterPro]
DC_1299
STR
1–239
DC_1299 IPR053171 IPR015406
IPR055385
ATT
91–212
IPR055385 DC_0014
IPR055385
ATT
236–357
IPR055385 IPR032876
QJT70550.1
1 1202
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 1-90 | ATT 91-212 | STR 213-235 | ATT 236-357 | STR 358-458 | ATT 459-616 | STR 617-1202
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJT70550.1
1 1202
Domain Start End Length (AA) Confidence
N-terminal 1 791 791 0,9958
Central domain 792 1138 348 0,0171
C-terminal 1139 1202 63 0,7060
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-791
Central
792-1138
C-terminal
1139-1202

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage 2019SD1
[NCBI] 		2848074 Uroviricota > Caudoviricetes > Drexlerviridae > Hanrivervirus > Hanrivervirus hv2019SD1
Host Shigella dysenteriae
[NCBI] 		622 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
d5864d5139a6eb3d10c30679157f27467000bffb85a897d70a075464d9294446
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5918
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50