Protein

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UniProt accession
A0A249Y291 [UniProt]
Protein name
Polygalacturonase
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSTRRPNFNNADLEQAYYYKRRSFGNGYTIKFQREALLWDSADGGDGNYYIWGGALPKSVPSGSTPATSGGLGNTAWVNIGTAALANVLYDMLTPEMFGAKGDGVADDTAAVVECWKSAKAKASDQFRIEVVMRHKYLIRAQTLIGSSNVRYSGGGTITTDSTALNYTMITFDDCANFIFTDIKVTRSAFPDPSVMWSKTNQAMVMTNCTDFLVSQCDVSYHTDAISVSSGARYIIEGNRTHELGEEGIAIRRSRKFVCRNNFVFNHHGDGILLKTANVFCHDGLIEGNHVFDGLKKSGIAGGARGGGITLNDEVIGTVSGINFSSLGVVGNLVRNTSYGLSFANVDDLRIEANSCIDIERFGINWDTTVFNNPSLNPMYRGAVVGNNVVNCGQVGISATSLNGINIFNVLVTGNTVESAGTQTGAEYPGITVSGGVVTSNIVTNCTVAYQGSDTVATGNRFIGSTRTTDGVGAVWLKIGGSGVFSDNVVVDSNKGYIRLSSANDLSFSGNDIALQSSFAGLYFTGTFTTGVKAGGNVYSCPNFPSVSNFNVGPTVIRSMELTPAEFGRKRHVYDGVAASGLTHLVGDVVSNRAPAVGFPMDYVVSAINGDGTPALTPLNFNRRLVTVTQDLVVTNGTFIQIKVTGLVGVLSNWMPEGVATSVPAQGLTITAHVTNAQEVTFLVWNHSGNDRNITGVTLSTYVHSVN
Physico‐chemical
properties
protein length:707 AA
molecular weight: 75187,35290 Da
isoelectric point:6,07640
aromaticity:0,09052
hydropathy:-0,01146

Domains

Domains [InterPro]
DC_0352
STR
2–704
DC_0352
G3DSA:2.10.10.80
ATT
17–91
G3DSA:2.10.10.80 IPR011050 IPR006626 IPR006626 IPR006626 IPR006626
IPR040775
RBD
21–81
IPR040775 IPR012334
IPR039448
ENZ
200–315
IPR039448 IPR006626
IPR006626
Unmapped
209–230
IPR006626 IPR006626 IPR006626
A0A249Y291
1 707
Architecture
STR
ATT
STR
STR 2-16 | ATT 17-91 | STR 92-704 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A249Y291
1 707
Domain Start End Length (AA) Confidence
N-terminal 1 109 109 0,9872
Central domain 110 563 455 0,9925
C-terminal 564 707 143 0,9863
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-109
Central
110-563
C-terminal
564-707

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage 2050H1
[NCBI] 		2024250 Uroviricota > Caudoviricetes > Pantevenvirales > Miltonvirus > Miltonvirus MAM1
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
abb8641f63b951bc7648e3ad99237902eccf035360ee10fe18e34a0584354e1a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7983
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50