Protein

View in Explore
Genbank accession
ASU01907.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MGFFAGKYSDGKTVLSLNTESGGDINRHYSPNANSIFHSDMPFVLVDGTYEVGLGDAGNGFFVCQMPPDIVNIKSNDPGRVILTAIEINGTHRAFLNGTQSKVGQTIVATQADPFRSFASVSQTSGFAFGNSLASGTYNYNPSLGHEESISRSGTGGTTLHSTYHGIVRPGAGAPVGITVAEAFAQLGFPTNSSTVPIDGNNPYYWDPGWMSPLGAAHRGHDWFYVCNSNIRGYGGVRQGLPGNVNTMYHDGGNRFVCRGSTTNLANQSGNPTVIQDWYNITPTKVIWYVLNLRYSNGGMSISGNPFTGSDILISPSNFIIKGVSLPNTGYKFINQNAFGNLGYRPDMEYIGNNAAYTGVFGDTTARCELVGSSNGGLWSPVDYGGAKSQISIYRFGVGKQWYVNSNDNTIGNEHGVVWGPSAVPLRLFGGNVGSSYMGDDITPSYPGTGDRYVGLSTIGLGIPGGNATVILTTEVISGNLNCAGVPANTWNNGVFQVQGRRAYSYSGGDAIFHQILTLPVGYLVPFHTTSAFRYTPNNALSRNSFIYTIKNLGNGNVELGVVMHVSLGSAVFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:585 AA
molecular weight: 62434,85340 Da
isoelectric point:7,69261
aromaticity:0,11282
hydropathy:-0,15333

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteriophage T5-like pork29
[NCBI] 		2024332 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASU01907.1 [NCBI]
Genbank nucleotide accession
MF431732 [NCBI]
CDS location
range 107569 -> 109326
strand -
CDS
ATGGGTTTTTTCGCTGGAAAATATAGCGATGGTAAGACCGTACTATCTTTAAATACTGAATCTGGTGGTGACATTAATCGTCACTATAGTCCAAATGCCAATAGTATTTTTCATAGTGATATGCCATTTGTTCTAGTTGATGGTACTTATGAGGTAGGATTAGGTGATGCCGGAAATGGGTTTTTCGTATGTCAGATGCCTCCTGATATAGTAAATATTAAATCTAATGATCCTGGTAGAGTTATACTAACTGCTATTGAAATTAACGGCACTCACAGAGCTTTTCTTAATGGTACTCAGAGTAAGGTTGGTCAAACTATAGTTGCCACTCAAGCAGATCCCTTTAGATCTTTTGCTAGTGTTTCTCAAACCAGTGGATTTGCCTTTGGTAATAGTCTAGCATCCGGCACTTATAATTATAATCCCTCTCTAGGGCACGAAGAATCTATCTCTAGGAGTGGTACAGGGGGTACTACGTTACATAGTACCTACCATGGGATAGTTAGGCCCGGTGCGGGAGCTCCTGTAGGTATTACTGTTGCAGAAGCTTTTGCACAATTAGGTTTTCCTACTAATAGTAGCACAGTACCTATAGATGGCAATAACCCGTACTATTGGGATCCTGGATGGATGTCACCTCTAGGAGCAGCGCATAGAGGGCATGATTGGTTTTATGTCTGCAATTCTAATATACGTGGATATGGTGGGGTTAGGCAAGGGCTCCCAGGTAATGTAAATACTATGTACCACGACGGTGGGAACAGATTTGTTTGTAGGGGATCTACTACTAATCTGGCCAACCAGTCTGGCAATCCTACGGTAATACAGGACTGGTATAATATAACTCCTACTAAGGTTATTTGGTATGTTCTTAATTTAAGGTACTCTAATGGTGGAATGAGTATTTCAGGCAACCCCTTTACTGGTTCTGATATTCTTATATCGCCTTCTAACTTCATAATTAAAGGGGTGAGTCTCCCTAATACCGGATATAAATTTATAAATCAGAATGCTTTTGGTAACCTAGGTTACCGTCCTGATATGGAGTATATAGGAAATAACGCAGCGTATACCGGGGTTTTTGGTGATACCACGGCAAGATGTGAACTTGTAGGGTCTAGTAATGGAGGGTTGTGGTCTCCTGTAGATTATGGAGGAGCTAAATCTCAAATTAGTATTTATAGATTCGGAGTAGGTAAACAGTGGTATGTAAACTCTAACGATAATACTATTGGTAATGAGCATGGAGTTGTTTGGGGACCCTCAGCAGTTCCACTGCGACTTTTTGGTGGAAATGTAGGTAGTTCTTATATGGGAGATGATATTACTCCCAGCTACCCAGGAACGGGTGATAGATACGTTGGTTTATCAACTATTGGGCTAGGTATACCAGGCGGAAATGCTACAGTAATTCTTACTACTGAAGTTATATCAGGTAATCTTAATTGTGCGGGTGTTCCAGCTAATACATGGAATAATGGTGTGTTTCAAGTGCAAGGAAGAAGAGCATATAGCTATAGCGGCGGGGATGCAATATTCCACCAGATTTTAACGCTACCTGTGGGCTATCTAGTACCTTTTCATACTACATCTGCTTTTAGATATACACCTAACAATGCTCTAAGTAGAAACAGTTTTATATACACTATTAAAAATTTAGGAAATGGAAATGTGGAGTTAGGAGTAGTTATGCACGTGAGTTTGGGTAGCGCAGTTTTCCTACCTAGATTAAGAGTAACAGTTCAACGCCTTACCTAA

Tertiary structure

PDB ID
5c895106724d5bfebc4c142714990618bf5dedca5f56f981541ce0a9885bbc43
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2399
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and characterization of T5-like bacteriophages representing two novel subgroups from food products Svab,D., Falgenhauer,L., Rohde,M., Szabo,J., Chakraborty,T. and Toth,I. 2018 — GenBank